BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NZ_CP034943	1,000,541	C→A	6.3%	G74G (GGC→GGA)	EO946_RS05160 →	aldo/keto reductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP034943	1,000,541	0	C	A	6.3%	1383.5 / 14.6	515	G74G (GGC→GGA)	EO946_RS05160	aldo/keto reductase
Reads supporting (aligned to +/- strand): ref base C (279/182); new base A (2/50); total (283/232)
Fisher's exact test for biased strand distribution p-value = 1.16e-16
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 518 total aligned reads displayed.

GGGAGGCACTGACGAAAAAACATCCATCAAAACAATCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCATAGAGGAAGTCGAGGCTTCTTTGAAGCGGCTCCAAACGGATTATATTGATC  >  NZ_CP034943/1000403‑1000680

gggAGGCACTGACGAAAAAACATCCATCAAAACAATCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCa                                                                                                                                            >  2:6057942/1‑140 (MQ=255)

 ggAGGCACTGACGAAAAAACATCCATCAACACAATCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCaa                                                                                                                                           <  2:3089927/140‑1 (MQ=255)

 ggAGGCACTGACGAAAAAACATCCATCAAAACAATCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCaa                                                                                                                                           <  2:6401812/140‑1 (MQ=255)

 ggAGGCACTGACGAAAAAACATCCATCAAAACAATCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCaa                                                                                                                                           <  2:1152248/140‑1 (MQ=255)

 ggAGGCACTGACGAAAAAACATCCATCAAAACAATCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCaa                                                                                                                                           <  2:6754393/140‑1 (MQ=255)

   aGGCACTGACGAAAAAACATCCATCAAAACAATCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCaaaa                                                                                                                                         >  1:4925174/1‑140 (MQ=255)

    ggCACTGACGAAAAAACATCCATCAAAACAATCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAag                                                                                                                                        >  1:2603966/1‑140 (MQ=255)

     gCACTGACGAAAAAACATCCATCAAAACAATCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCACTCCGAGGAAATCGTCGGGAAGCCGATCAAGGAACACGGCAAAcga                                                                                                                                       >  2:5811263/1‑140 (MQ=255)

      cACTGACGAAAAAACATCCATCAAAACAATCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGACGGCGATCAAGGAACACGGCAAAagag                                                                                                                                      >  2:4087391/1‑140 (MQ=255)

      cACTGACGAAAAAACATCCATCAAAACAATCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAagag                                                                                                                                      >  2:1495363/1‑140 (MQ=255)

      cACTGACGAAAAAACATCCATCAAAACAATCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAagag                                                                                                                                      >  1:1962563/1‑140 (MQ=255)

      cACTGACGAAAAAACATCCATCAAAACAATCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAagag                                                                                                                                      >  2:5032570/1‑140 (MQ=255)

        cTGACGAAAAAACATCCATCAAAACAATCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGAt                                                                                                                                    <  2:1675652/140‑1 (MQ=255)

          gACGAAAAAACATCCATCAAAACAATCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCa                                                                                                                                  >  2:4200067/1‑140 (MQ=255)

          gACGAAAAAACATCCATCAAAACAATCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCa                                                                                                                                  >  2:5336149/1‑140 (MQ=255)

           aCGAAAAAACATCCATCAAAACAATCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAg                                                                                                                                 >  2:852252/1‑140 (MQ=255)

               aaaaaCATCCATCAAAACAATCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGa                                                                                                                             <  2:1248774/140‑1 (MQ=255)

                     atccatcAAAACAATCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCaaaa                                                                                                                                         >  1:4667462/1‑122 (MQ=255)

                       ccatcAAAACAATCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCa                                                                                                                     >  1:7279739/1‑140 (MQ=255)

                       ccatcAAAACAATCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCa                                                                                                                     <  2:3210955/140‑1 (MQ=255)

                              aacaacCCCCGCCGCTCTTGAGCAGGGCATCACACTTCTTCACACGGCGCCGGCTTACGCCTTGGGGCCGTCCGTGTAAATCGCCGGGAAGGCGATCAAGGAACACGGAAAAAGAGATCAGGTGATTCGCCAAACCaaaa                                                                                                              <  2:3741051/140‑1 (MQ=255)

                              aaaaaTCCGCGCCGCTCTTGATCAGGGGATCACAATGATTGACACTGCGCCGGCTTACGGCTTGGGGCAGTCCGAGGAAATCGTCGGGATGGCGATCAAGGACCACGGCAAAAGAGATCAGGTGATTCTCGAAACGaaaa                                                                                                              <  2:2252021/137‑1 (MQ=255)

                              aaCAATCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATGGTCGGTAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGaaaa                                                                                                              <  2:4773351/140‑1 (MQ=255)

                              aaCAATCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGaaca                                                                                                              <  2:5215450/140‑3 (MQ=255)

                                   tCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAACGAGATCAGGTGATTCTCGCAACGAAAACGGct                                                                                                         >  2:5930652/1‑140 (MQ=255)

                                   tCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGct                                                                                                         >  1:3477302/1‑140 (MQ=255)

                                   tCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATAGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGct                                                                                                         >  1:897483/1‑140 (MQ=255)

                                   gccccgccgcTGTTGATCAGGGGATCACACTGATTTACACTGCGCCGGCTTACGGTTTCGGGCAGTCCGAGCAAATCGTCGGGACGGCGATCACGGAACACGCCAAACGAGATCAGGTGATTCTCGCAACCAAAACGGct                                                                                                         <  1:4103596/136‑1 (MQ=255)

                                    ccGCGCCGCTGTTGATCGGGGGATCACCCTTTTTGCCAGTGCGCCGGGTTAGGGCTTCGGGCAGTCCGAGGAAATGGTCGGGATGGCGATCAAGTAACACGGAAAAAGAGATCCGGTTATTCTCGCAACGAAAACGGctc                                                                                                        <  1:7557663/140‑1 (MQ=255)

                                      gcgcCGCTCTTGATCAGGGGATCACACTGATTGACCCTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAACTCGTCGGGAAGGCGATCAAGCAACACGGAAAAAGACATCCGGTGATTCTCCCAACCAAAACGGCTctg                                                                                                      <  1:2815308/140‑1 (MQ=255)

                                      gcgcCGCCCTGGATCTGGGGATCACAGTGATTGACACGGCGCCGGCTTAGGGCTTCGGGCAGTCCGAGAAATTCGTGGGCAAGGCGATCAAGGAACCGGGCAAAACCGAACAGGTGATTCTCGCCACCAACACGGCTctg                                                                                                      <  1:1592963/140‑1 (MQ=255)

                                                      ggggATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAAcc                                                                                      >  2:336606/1‑140 (MQ=255)

                                                      ggggATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAAcc                                                                                      >  2:1625265/1‑140 (MQ=255)

                                                      ggggATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAAcc                                                                                      >  2:5674812/1‑140 (MQ=255)

                                                       gggATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCa                                                                                     >  1:6035709/1‑140 (MQ=255)

                                                       gggATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCa                                                                                     >  1:6346719/1‑140 (MQ=255)

                                                               ctgttttGACAGTGCGCCGGTTGAGGGCTTCGGGCAGTCCGAGTAATTGGTCGGGAAGGCGATCAAGTAACACGGCAAAACTGATCTGGTTTTTCTCCCAACCAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTcc                                                                             <  1:3305648/135‑1 (MQ=255)

                                                                 tgtttGACACGGCGCCGGCTTACGGCTTCGGGCAGCCCGAGCAAAACGGCGGGAAGGCGATCACGCAACACGCAAAAACAGAACAGGTGATGCGCGCAACGAACACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGc                                                                           <  1:4785488/137‑1 (MQ=255)

                                                                 tGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGaaaa                                                                                                              <  2:7233029/105‑1 (MQ=255)

                                                                 tGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGc                                                                           >  2:7652444/1‑140 (MQ=255)

                                                                   aTTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCACGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGCAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCa                                                                         >  1:4391248/1‑140 (MQ=255)

                                                                   aTTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGCGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCa                                                                         >  2:5424878/1‑140 (MQ=255)

                                                                   aTTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGAGTGGAAGAACAACCAGCTATTCCGCCa                                                                         >  2:5710553/1‑140 (MQ=255)

                                                                   aTTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCa                                                                         >  2:2615750/1‑140 (MQ=255)

                                                                   aTTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCa                                                                         >  2:6639810/1‑140 (MQ=255)

                                                                   aTTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCa                                                                         >  1:5277184/1‑140 (MQ=255)

                                                                   aTTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCa                                                                         >  1:2212074/1‑140 (MQ=255)

                                                                   aTTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCa                                                                         >  1:4470851/1‑140 (MQ=255)

                                                                   aTTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCa                                                                         >  1:1481458/1‑140 (MQ=255)

                                                                        cacTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCaa                                                                    >  2:4257488/1‑140 (MQ=255)

                                                                         acTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGACCACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAATCGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCaaa                                                                   >  1:238509/1‑140 (MQ=255)

                                                                         acTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCaaa                                                                   >  2:3547218/1‑140 (MQ=255)

                                                                         acTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCaaa                                                                   >  2:2913009/1‑140 (MQ=255)

                                                                          cTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCaaa                                                                   <  2:4521600/139‑1 (MQ=255)

                                                                           tGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACa                                                                 >  1:1047148/1‑140 (MQ=255)

                                                                           tGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACa                                                                 >  1:7064182/1‑140 (MQ=255)

                                                                             cgcCGGCTTACGGGTTCGGGCAGTCCGAGGACATCGTCGGGAAGGCGATCAAGGACCACGGCACAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGCAGAACACCCAGCTATTCCGCCACGCCAACaga                                                               >  2:5559162/1‑140 (MQ=255)

                                                                             cgcCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAAcctg                                                               >  2:3305648/1‑137 (MQ=255)

                                                                             cgcCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACaga                                                               >  1:3644143/1‑140 (MQ=255)

                                                                             cgcCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACaga                                                               >  1:5817687/1‑140 (MQ=255)

                                                                             cgcCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGAAAAACAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACaga                                                               >  1:1191437/1‑140 (MQ=255)

                                                                             cgcCGGCTTACGGCTTCGGCCAGTCCCAGTAAATCGTCGGCAAGGCGATAAAGGAACACGGCAAAACACATCAGGTGATTCTCGCAACGAAAACGGCTCTCGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACaga                                                               <  2:4715254/140‑1 (MQ=255)

                                                                             cgcCGGCTTACGGATTCGGGCAGTCCGAGGAAATCGTCGGGACGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGCCTCTGGACAGGAAGAACAACCAGATATTCCGCCACGCACACagc                                                               >  2:6188146/1‑139 (MQ=255)

                                                                               ccGGCTTACGGCTTCGGGCCGTCCGCGCAAATCGTCGGTAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATCCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGc                                                             <  1:7683972/140‑1 (MQ=255)

                                                                               ccGGCTGACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACCCGGCAAAAGAGATCAGGTGATTCTCGCAACGAACACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGc                                                             <  2:7382580/140‑1 (MQ=255)

                                                                                  gCTTACGGCTTGGGGCAGTCCGAGTAAATGGTCGGGAAGGCGATCACGGAACAGGGAAAAAGATATCAGGTTATTCTCGCAACCAACACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCgag                                                          <  1:3010418/140‑1 (MQ=255)

                                                                                  gCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCgag                                                          <  1:5704719/140‑1 (MQ=255)

                                                                                  gCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCgag                                                          <  2:2791275/140‑1 (MQ=255)

                                                                                  gCTTACGGCTTCGGGCAGGCCGCGGAAAACGTCGGGAAGGCTATCAAGGAACACGGCAAAAGAGATCAGGTGTTTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCgag                                                          <  1:5557619/140‑1 (MQ=255)

                                                                                  ccTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGATGGCGACCAAGGAACACGGCAAAAGAGAACAGGTGATTCTCGAAACGAACACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCgag                                                          <  1:3785239/139‑1 (MQ=255)

                                                                                       cGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCa                                                     >  2:4873046/1‑140 (MQ=255)

                                                                                         gCTTCGGGCAGGCCTCGGAAATCGTCGGGATGGCGAAAACGCAACCCGGCAAAATATATCCGGTTATGCTCGCAACCAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCATa                                                   <  1:2680287/140‑1 (MQ=255)

                                                                                            tCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCATagag                                                >  1:5078473/1‑140 (MQ=255)

                                                                                            tCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCATagag                                                >  1:6893726/1‑140 (MQ=255)

                                                                                             cGGGCAGTCCGAGTAAATCGTCGGGAAGGCGATAAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCATAGAgg                                               <  2:6866310/140‑1 (MQ=255)

                                                                                             cGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGc                                                                           >  1:6682934/1‑112 (MQ=255)

                                                                                                    tCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCATAGAGGAAGTCGa                                        >  1:6806894/1‑140 (MQ=255)

                                                                                                      ctaGGAAATGGTGGGGAAGGCTATCAAGGAACCCGGAAAAAGAGATCAGTTGTTTCTCCAAACCAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCATAGAGGAAGTCGAgg                                      <  1:5032570/138‑1 (MQ=255)

                                                                                                      cGAGGAAATCGTCGGGAAGGCGATCACGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCATAGAGGAAGTCGAgg                                      <  2:5082318/140‑1 (MQ=255)

                                                                                                      cGAGGAAATCGTCGGGAAGGCGATCAAGTAACACGGAAAAACAGATCCGGTGATTCTCGCACCCAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCATAGAGGAAGTCGAgg                                      <  1:5920969/140‑1 (MQ=255)

                                                                                                      cGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAACACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCATAGAGGAAGTCGAgg                                      <  1:3975732/140‑1 (MQ=255)

                                                                                                            aaTCGTCGGGAAGGCGATCAAGCAACACGGAAAACGACACCAGGTGATTCTCCCAACCAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCATAGAGGAAGTCGAGGcttctt                                <  1:95995/140‑1 (MQ=255)

                                                                                                              tcgtcgGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGc                                                                           <  2:4315652/95‑1 (MQ=255)

                                                                                                              tcgtcgGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCATAGAGGAAGTCGAGGCTTCTTTg                              >  2:4032198/1‑140 (MQ=255)

                                                                                                              tcgtcgGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCATAGAGGAAGTCGAGGCTTCTTTg                              >  2:2487097/1‑140 (MQ=255)

                                                                                                              tcgtcgGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCATAGAGGAAGTCGAGGCTGCTTTg                              >  2:6989266/1‑140 (MQ=255)

                                                                                                                 tcgGGAAGGCTATAAAGTAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCATAGAGGACGTCGAGGCTTCTTTGAAg                           <  2:3785299/140‑1 (MQ=255)

                                                                                                                  cgGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCaaa                                                                   >  2:1515506/1‑99 (MQ=255)

                                                                                                                          ctaTCAAGGAACCCGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGACCAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCATAGAGGAAGTCGAGGCTTCTTTGAAGCGGCTCCaa                  <  2:2109859/138‑1 (MQ=255)

                                                                                                                          ctaTCAAGGAACACGGCAAAAGAGATCCGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCATAGAGGAAGTCGAGGCTTCTTTGAAGCGGCTCCaa                  <  2:917923/138‑1 (MQ=255)

                                                                                                                          ctaTCAAGGAACACGGCAAAAGACATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCATAGAGGAAGTCGAGGCTTCTTTGAAGCGGCTCCaa                  <  2:7472635/138‑1 (MQ=255)

                                                                                                                          cGATCAAGGAACACGTCAAAAGAGATCAGGTGATTCACGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCATAGAGGAAGTCGAGGCTTCTTTGAAGCGGCTCCaa                  <  2:7077528/140‑1 (MQ=255)

                                                                                                                          cGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCATAGAGGAAGTCGAGGCTTCTTTGAAGCGGCTCCaa                  <  2:1869271/140‑1 (MQ=255)

                                                                                                                          cGATCAAGGAACACGGAAAAAGCGATCAGTTGTTTCTCGCAACTAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCATAGAGGAAGTCGAGGCTTCTTTGAAGCGGCTCCaa                  <  1:1858730/140‑1 (MQ=255)

                                                                                                                          cGATCAAGGAACACGCCAAAAGACAACAGGTTATTCTCGCAACGACAACGGCTCTGGACTGGAAGAACCACCAGCTATACCGCCACGCAAACAGAGCGAGAATCATAGAGCAAGTCGAGGCTTCTTTGAAGCGGCTCCaa                  <  2:1979973/140‑1 (MQ=255)

                                                                                                                          cGATAAAGCAACACGGCAAACGACATCAGGTGATTCGCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCATAGAGGAAGTCGAGGCTTCTTTGAAGCGGCTCCaa                  <  1:310543/140‑1 (MQ=255)

                                                                                                                           gATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCATAGAGGAAGTCGAGGCTTCTTTGAAGCGGCTCCaaa                 >  1:4301213/1‑140 (MQ=255)

                                                                                                                               aaGGAACACGGCAAAATACATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAAAAGATCTATATTCATAGAGGAATTCGATTCTTATTTTAAGCGGCTCCAAACGGa             <  2:2941608/140‑1 (MQ=255)

                                                                                                                               aaGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCATAGAGGAAGTCGAGGCTTCTTTGAAGCGGCTCCAAACGGa             <  1:5674812/140‑1 (MQ=255)

                                                                                                                                        ggCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCATAGAGGAAGTCGAGGCTTCTTTGAAGCGGCTCCAAACGGATTATATTGa    <  2:3658894/140‑1 (MQ=255)

GGGAGGCACTGACGAAAAAACATCCATCAAAACAATCCGCGCCGCTCTTGATCAGGGGATCACACTGATTGACACTGCGCCGGCTTACGGCTTCGGGCAGTCCGAGGAAATCGTCGGGAAGGCGATCAAGGAACACGGCAAAAGAGATCAGGTGATTCTCGCAACGAAAACGGCTCTGGACTGGAAGAACAACCAGCTATTCCGCCACGCAAACAGAGCGAGAATCATAGAGGAAGTCGAGGCTTCTTTGAAGCGGCTCCAAACGGATTATATTGATC  >  NZ_CP034943/1000403‑1000680

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`