| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 131,088 | C→A | 100% | S194Y (TCT→TAT) | fusA → | elongation factor G |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 131,088 | 0 | C | A | 99.5% | 3199.4 / ‑1.0 | 907 | S194Y (TCT→TAT) | fusA | elongation factor G |
| Reads supporting (aligned to +/- strand): ref base C (3/3); new base A (457/444); total (460/447) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 911 total aligned reads displayed.
AGGAACTTTAAGAGACCGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTCTGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAATACCTTGAGGGTGAAGAAATCACGATTGACGAG > NZ_CP034943/130951‑131224 | aCTTAAAGAGACCGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACAATGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGAtcc > 2:7368495/1‑138 (MQ=255) ttAAGAGACCGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCgaa > 2:322205/1‑140 (MQ=255) ttAAGAGACCGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCgaa > 2:427610/1‑140 (MQ=255) ttAAGAGACCGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGAgaa > 2:4636635/1‑140 (MQ=255) ttAAGAGACCGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAAAGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCgaa > 2:7098964/1‑140 (MQ=255) agagACCGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCgaaaga < 2:2538279/140‑1 (MQ=255) agagACCGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCgaaaga < 2:6706116/140‑1 (MQ=255) agagACCGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGGTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCgaaaga < 1:4949076/140‑1 (MQ=255) agagACCGTCTTCAAGCAAACGCTCATGCAATTCAAGTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCgaaaga < 1:3283969/140‑1 (MQ=255) aCCGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATc > 2:4467870/1‑140 (MQ=255) ccGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATcc < 2:6957564/140‑1 (MQ=255) ccGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATcc < 1:5089056/140‑1 (MQ=255) ccGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATcc < 1:2819948/140‑1 (MQ=255) cGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATccg > 1:7133737/1‑139 (MQ=255) cGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATccc > 2:3464225/1‑140 (MQ=255) cGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTAGGATGCGAAAGAAATccc > 1:3972505/1‑140 (MQ=255) tCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTg > 2:2461238/1‑140 (MQ=255) cTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGATGACAACTTCGAAGGGATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGa < 2:3962800/140‑1 (MQ=255) ttCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGaa < 2:5554274/140‑1 (MQ=255) tCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAag < 1:1119541/140‑1 (MQ=255) tCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAag < 2:1901774/140‑1 (MQ=255) tCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAag < 2:5348281/140‑1 (MQ=255) tCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAag < 2:4150164/140‑1 (MQ=255) aaaCGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACa < 2:4879389/140‑1 (MQ=255) aaaCGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACa < 1:1575854/140‑1 (MQ=255) aaCGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAATTCACTGAAGAGTACaa > 2:1530457/1‑140 (MQ=255) aCGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACaaa > 2:518179/1‑140 (MQ=255) tCATGCAATTCAATGGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTATACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCACTGAAGAGTACAAAGAGc < 2:6532886/140‑1 (MQ=255) tGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAg < 1:7240586/140‑1 (MQ=255) ttcaattGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGaa > 1:1979242/1‑140 (MQ=255) ttcaattGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGaa > 2:3097404/1‑140 (MQ=255) tcaatgGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATAGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAag < 1:6616358/140‑1 (MQ=255) attGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGc < 1:2499008/140‑1 (MQ=255) gATCGGTGCTGACGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCa > 1:2982357/1‑140 (MQ=255) ctCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTAGTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCaa < 1:7670805/139‑1 (MQ=255) aTCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCaa < 1:7429909/140‑1 (MQ=255) gTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGc < 2:5661395/140‑1 (MQ=255) gTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGc < 1:78487/140‑1 (MQ=255) gCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCt < 1:4710043/140‑1 (MQ=255) aGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCAtt < 1:3157992/140‑1 (MQ=255) aGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCAtt < 1:3391584/140‑1 (MQ=255) ggACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTg < 2:7753340/140‑1 (MQ=255) cAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAg < 2:6387333/140‑1 (MQ=255) aaCTTCGAAGGTCTCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAAAAGCCTCATTGAAGc > 1:3717809/1‑140 (MQ=255) aaCTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGc > 2:7611949/1‑140 (MQ=255) aaCTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGc > 2:2304380/1‑140 (MQ=255) aaCTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGc > 2:2167356/1‑140 (MQ=255) aCTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCt < 2:5459429/140‑1 (MQ=255) aCTTCGAAGGTATCATCGACCGTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAAGCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCt < 2:4064938/140‑1 (MQ=255) cTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGGGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTg > 1:6138919/1‑140 (MQ=255) aaGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTtgt > 2:1312284/1‑140 (MQ=255) atcatcGACCTTGTAGAAAACGTTTATTATATCAACGAAGATGACCTCGGAACTCGTTATGATGAGAAAGAAATCACTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCt > 2:1682633/1‑140 (MQ=255) atcatcGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCt > 1:216913/1‑140 (MQ=255) atcatcGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCt < 2:1378150/140‑1 (MQ=255) tcatcGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCaa < 2:2669587/112‑1 (MQ=255) tcatcGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCtt > 1:2369650/1‑140 (MQ=255) tcatcGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCtt > 1:5492255/1‑140 (MQ=255) tcatcGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCtt > 2:2006227/1‑140 (MQ=255) tcatcGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGGTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCtt > 1:1908679/1‑140 (MQ=255) tcatcGACCTTGTAGAAAACGTTGCGTA‑TTCTACGAAGATGACCTCGGAACTCGTTATGCTGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCGTAAGAGCTTAGCAACAGCCTCATTGAAGCTGTTTGTGAGCTtg > 1:429942/1‑140 (MQ=255) aCCTTGTAGAGAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGaa < 1:4377325/140‑1 (MQ=255) aCCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGaa < 2:5928278/140‑1 (MQ=255) aCCTGGTAGAAAACGTTGCGTATTTCTACGAAGAGGACCTCCGAACTCGTTATGATGCGAAAGAAATCCCGGAACAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGaa < 2:4697336/140‑1 (MQ=255) cTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGACGAGCTTCGCAACAGCCTCATTGACGCTGTTTGTGAGCTTGATGAaga > 1:6005753/1‑140 (MQ=255) cTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCGGTTTGTGAGCTTGATGAaga > 1:4120409/1‑140 (MQ=255) tGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGc > 1:1006628/1‑140 (MQ=255) tGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGc > 2:6082125/1‑140 (MQ=255) aGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTa < 2:3359156/140‑1 (MQ=255) aGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTa < 1:5654107/140‑1 (MQ=255) aGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTa < 1:1411195/140‑1 (MQ=255) aGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTa < 1:1356118/140‑1 (MQ=255) aGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTa < 2:7487623/140‑1 (MQ=255) aGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTa < 1:6780234/140‑1 (MQ=255) aGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTa < 1:4550856/140‑1 (MQ=255) aaaaCGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATg < 2:3838572/140‑1 (MQ=255) aaCGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGa > 1:4052428/1‑140 (MQ=255) cGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATa < 2:1007352/140‑1 (MQ=255) cGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATa < 2:6177343/140‑1 (MQ=255) ttGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATaaa < 2:2858790/140‑1 (MQ=255) ttGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATaaa < 2:724826/140‑1 (MQ=255) tGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAag < 1:4190722/59‑1 (MQ=255) tGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCt < 2:5036883/96‑1 (MQ=255) tGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAATAGCTTATGGATAAAt > 1:3859845/1‑140 (MQ=255) tGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTa > 1:5799243/1‑131 (MQ=255) tGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTa < 2:5799243/131‑1 (MQ=255) tGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAAt > 1:7027516/1‑140 (MQ=255) tGCGTATTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAAt > 1:1742410/1‑140 (MQ=255) aTTTCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAATACCtt < 2:2937230/140‑1 (MQ=255) ttCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAATACCTTGa > 1:5306073/1‑140 (MQ=255) ttCTACGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAATACCTTGa > 2:3646594/1‑140 (MQ=255) cGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATCAATACCTTGAGGGTg > 2:6836765/1‑140 (MQ=255) cGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAATACCTTGAGGGTg > 1:2685584/1‑140 (MQ=255) cGAAGATGACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAATACCTTGAGGGTg > 1:360651/1‑140 (MQ=255) cGAAGATGACCTCGGAACTCGTTATGAGGCGAAAGAAATCCCTGAAGAGTACCAAGAGCAAGCTGAAGTGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAATACCTTGAGGGTg > 2:6435452/1‑140 (MQ=255) gACCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAATACCTTGAGGGTGAAGAAAt < 1:6391151/140‑1 (MQ=255) aCCTCGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGa > 1:2416440/1‑115 (MQ=255) ccTCGGACCTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGACCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAATACCTTGAGGGTGAAGAAATCa < 2:1048608/140‑1 (MQ=255) cGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTa > 2:2765618/1‑107 (MQ=255) cGGAACTCGTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAATACCTTGAGGGTGAAGAAATCACGa > 2:1183606/1‑140 (MQ=255) gTTATGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAATACCTTGAGGGTGAAGAAATCACGATTGACGAg < 1:886894/140‑1 (MQ=255) | AGGAACTTTAAGAGACCGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGGTGCTGAGGACAACTTCGAAGGTATCATCGACCTTGTAGAAAACGTTGCGTATTTCTACGAAGATGACCTCGGAACTCGTTCTGATGCGAAAGAAATCCCTGAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTCATTGAAGCTGTTTGTGAGCTTGATGAAGAGCTTATGGATAAATACCTTGAGGGTGAAGAAATCACGATTGACGAG > NZ_CP034943/130951‑131224 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |