| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,427,023 | C→T | 82.2% | L80F (CTC→TTC) | ptsP → | phosphoenolpyruvate‑‑protein phosphotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,427,023 | 0 | C | T | 82.2% | 839.7 / 161.8 | 353 | L80F (CTC→TTC) | ptsP | phosphoenolpyruvate‑‑protein phosphotransferase |
| Reads supporting (aligned to +/- strand): ref base C (33/30); new base T (102/188); total (135/218) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.47e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 354 total aligned reads displayed.
CTGATTCTGAAGCGGAAGTAAGCCGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTCTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGTTTGAATCAATGGACAACGAATATATGAAAGA > NZ_CP034943/1426886‑1427159 | gATTCTGAAGCGGAAGTACGCCGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAg < 1:5268737/140‑1 (MQ=255) gATTCTGAAGCGGAAGTAAGCCGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAg < 1:7728714/140‑1 (MQ=255) aTTCTGAAGCGGAAGTAAGCCGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGt < 2:7695693/140‑1 (MQ=255) aaGCGGAAGTAAGCCGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCt > 1:58571/1‑140 (MQ=255) aGCGGAAGTAAGCCGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTg < 2:3142908/140‑1 (MQ=255) aGCGGAAGTAAGCCGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTg < 2:2394701/140‑1 (MQ=255) aGCGGAAGTAAGCCGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTg < 2:122896/140‑1 (MQ=255) aGCGGAAGTAAGCCGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTg < 1:2475180/140‑1 (MQ=255) aGCGGAAGTAAGCCGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTg < 2:5894279/140‑1 (MQ=255) aGCGGAAGTAAGCCGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTg < 2:6329538/140‑1 (MQ=255) aGCGGAAGTAAGCCGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTg < 2:676346/140‑1 (MQ=255) aGCGGAAGTAAGCCGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTg < 1:5450024/140‑1 (MQ=255) aGCGGAAGTAAGCCGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTg < 1:56872/140‑1 (MQ=255) aGCGGAAGTAAGCCGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTCCTGCTCACCTTTTAGTTCTCAGTGACCCTg < 1:7584552/140‑1 (MQ=255) cGGAAGTAAGCCGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAg < 1:4871960/140‑1 (MQ=255) cGGAAGTAAGCCGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAg < 1:1104521/140‑1 (MQ=255) ggAATTAAGCCGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGc < 1:6573120/140‑1 (MQ=255) ggAAGTAAGCCGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGc < 1:7395372/140‑1 (MQ=255) ggAAGTAAGCCGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGc < 1:6081995/140‑1 (MQ=255) gAAGTAAGCCGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCt > 1:6968022/1‑140 (MQ=255) gAAGTAAGCCGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCt > 1:6936949/1‑140 (MQ=255) gAAGTAAGCCGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCt > 1:1252036/1‑140 (MQ=255) aaGCCGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACACTGAGCTTCTGa > 2:4884656/1‑140 (MQ=255) aGCCGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGaa < 2:5685537/140‑1 (MQ=255) ccGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAATAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTATTTCTCAGTGACCCTGAGCTTCTGAAcc > 2:7743201/1‑140 (MQ=255) ccGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTCTCAGTGACCCTGAGCTGCTGAAcc > 2:2859434/1‑140 (MQ=255) ttttGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTg < 2:1095810/125‑1 (MQ=255) ttttGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCtg > 2:1599114/1‑140 (MQ=255) ttttGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCtg > 2:3751062/1‑140 (MQ=255) ttttGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTGTAGTTTTCAGTGACCCTGAGCTTCTGAACCCtg > 1:1396477/1‑140 (MQ=255) tttGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTATGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCtgt > 2:2691687/1‑140 (MQ=255) aaGCTATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTgaaagaa < 1:5587003/140‑1 (MQ=255) aaGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTgaaagaa < 1:170110/140‑1 (MQ=255) aaGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTgaaagaa < 1:3658459/140‑1 (MQ=255) aaGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTgaaagaa < 1:3244050/140‑1 (MQ=255) gCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGaaaa > 2:7124866/1‑140 (MQ=255) aTTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAAt > 2:1826564/1‑140 (MQ=255) accttCACAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTCTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCa < 2:2266401/137‑1 (MQ=255) aCGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCa < 1:1769458/140‑1 (MQ=255) ttCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTg > 1:2221438/1‑140 (MQ=255) cAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGAt < 1:3442575/140‑1 (MQ=255) gagCTCGAAAAAATAAAAGAGCACGCTTTGAAAGAACTGGGTCTGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTAAGTGACCCTGAGATTGTGAAGAGGGTGAAAGAAAATATAAGGACTGATTAAGTGaa > 2:970075/1‑140 (MQ=255) agCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGact < 1:1237553/140‑3 (MQ=255) agCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAAt > 1:5402210/1‑140 (MQ=255) agCTAGAAATATTCAAAGAGCACTCTTTGTAAGATCTTTGTCAGGATAAATCTGTTATTTTTTATTCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTGTGAACCCTGTGAAAGAAAAAATCAGCACTGATTAATTGact < 1:4414538/140‑3 (MQ=255) cTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGc > 2:5998318/1‑140 (MQ=255) cTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCAATGATTCACTGAATGc > 2:6781143/1‑140 (MQ=255) aaaaTCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAAtt < 2:1773421/140‑1 (MQ=255) aaaaTCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTCTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAAtt < 1:7271304/140‑1 (MQ=255) cAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCtt < 2:7268495/140‑1 (MQ=255) aaaaGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCtt < 2:5535090/139‑1 (MQ=255) aaGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTa < 1:6439874/140‑1 (MQ=255) cACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGa > 2:6832977/1‑140 (MQ=255) aCGCTTTGAACGAACTGGGTCAGGATATAGCTGATATTTTTTCGGCTCACCTTTTAGTTCTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCACCACGGATTCAGTGAATGCTTAATTCGCTTTAAAAGaa < 2:5829332/140‑1 (MQ=255) aCGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCGGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGaa < 1:7746774/140‑1 (MQ=255) aCGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGaa < 1:3871604/140‑1 (MQ=255) cggtgtGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTATGCTCACCTTTTAGTTTTCAGTGACCCTGAGATTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTACAAGtaa > 2:5339893/6‑140 (MQ=255) cGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTCTCAGTGACCCTGAGCTACTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGaaa < 1:2859434/140‑1 (MQ=255) gCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAAc < 2:1015704/140‑1 (MQ=255) tttGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGt < 2:6046858/140‑1 (MQ=255) aCTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGt < 1:4173126/140‑1 (MQ=255) aCTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGt < 1:7664640/140‑1 (MQ=255) cTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGtt < 2:7045700/140‑1 (MQ=255) cTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGtt < 2:4630446/140‑1 (MQ=255) gggTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCg < 2:3577813/140‑1 (MQ=255) gggTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTGTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCg < 2:1396477/140‑1 (MQ=255) ggTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTCTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGt < 1:6282515/140‑1 (MQ=255) tCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTa < 2:3899264/140‑1 (MQ=255) ggATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAATCGTCTTCTATGTTCGTTACTa > 1:1550363/1‑140 (MQ=255) ggATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTa > 1:7043791/1‑140 (MQ=255) aaGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGttt > 1:3154277/1‑140 (MQ=255) aaGCTGATATTTTTTCTGCTCACCTTTTAGTTCTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAGGAAACGTCTTCTATGTTCGTTACTATGttt > 2:3242938/1‑140 (MQ=255) aGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACt > 1:452508/1‑133 (MQ=255) aGCTGATATTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACt < 2:5141912/133‑1 (MQ=255) atatTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGTTTGAATCa > 1:2380188/1‑140 (MQ=255) atatTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGTTTGAATCa > 1:101317/1‑140 (MQ=255) atatTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGTTTGAATCa > 2:7618832/1‑140 (MQ=255) atatTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGTTTGAATCa > 2:6549282/1‑140 (MQ=255) atatTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGTTTGAATCa > 1:2550672/1‑140 (MQ=255) atatTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGTTTGAATCa > 1:873423/1‑140 (MQ=255) atatTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGTTTGAATCa > 1:2729270/1‑140 (MQ=255) atatTTTTTCTGCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGTTTGAATCa > 2:4120048/1‑140 (MQ=255) atatTTTTTCTGCTCACCTTTTAGTTTTCAGGGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGTTTGAATCa > 1:2254135/1‑140 (MQ=255) atatTTTTTCTGCTCACCTTTTAGTTCTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGtt < 2:200715/133‑1 (MQ=255) atatTTTTTCTGCTCACCTTTTAGTTCTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGtt > 1:200715/1‑133 (MQ=255) atatTTTTTCTGCTCACCTTTTAGTTCTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGTTTGAATCa > 1:6762477/1‑140 (MQ=255) gCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGTTTGAATCAATGGACAACGa < 1:3089123/140‑1 (MQ=255) gCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGTTTGAATCAATGGACAACGa < 1:6306562/140‑1 (MQ=255) gCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGTTTGAATCAATGGACAACGa < 2:7386576/140‑1 (MQ=255) gCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGTTTGAATCAATGGACAACGa < 1:5127323/140‑1 (MQ=255) gCTCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTCAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGTTTGAATCAATGGACAACGa < 1:4696718/140‑1 (MQ=255) gCTCAACTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGTTTGAATCAATGGACAACGa < 2:4461737/140‑1 (MQ=255) gCTAACATTTTAGTTTTCAGTGACCCTTAGCTTCTGAACCCTGTGAAATAAAAAATCAGCAATGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGTTTGAATCAATGGACAACGa < 1:1947676/140‑1 (MQ=255) tCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGTTTGAATCAATGGACAACGAat < 2:1483364/140‑1 (MQ=255) tCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGTTTGAATCAATGGACAACGAat < 1:3751062/140‑1 (MQ=255) tCACCTTTTAGTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGTTTGAATCAATGGACAACGAat < 1:4070681/140‑1 (MQ=255) tCACCTTTTAGTTCTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGTTTGAATCAATGGACAACGAat < 1:707886/140‑1 (MQ=255) acACCTTTTAGATTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGAACTGATTCAGTTAATGCTGAATTCGCTTTAAAACAAACGTATTATATGTTCGTTACTATGTTAGAATCAATGGACAACGaag < 2:7582390/139‑2 (MQ=255) gTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGTTTGAATCAATGGACAACGAATATATGAAaga < 2:4876713/140‑1 (MQ=255) gTTTTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGTTTGAATCAATGGACAACGAATATATGAAaga < 2:3484163/140‑1 (MQ=255) | CTGATTCTGAAGCGGAAGTAAGCCGTTTTGATGAAGCGATTGCACGTTCAAAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCAGGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTCTCAGTGACCCTGAGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAATGCTGAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACTATGTTTGAATCAATGGACAACGAATATATGAAAGA > NZ_CP034943/1426886‑1427159 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |