| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,820,732 | C→A | 7.4% | S361Y (TCT→TAT) | EO946_RS09145 → | thioesterase domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,820,732 | 0 | C | A | 7.4% | 729.9 / 7.7 | 304 | S361Y (TCT→TAT) | EO946_RS09145 | thioesterase domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (130/135); new base A (2/33); total (132/172) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.45e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 337 total aligned reads displayed.
GCGCTTGAGAGTGAGGGATATCGCTATGTTTCTTTTATTGCTGAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCATGAAGATACGACATTCGAG > NZ_CP034943/1820593‑1820871 | gcgcTTGAGAGTGAGGGATATCGCTATGTTTCTTTTATTGCTGAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTc > 1:3571041/1‑140 (MQ=255)gcgcTTGAGAGTGAGGGATATCGCTATGTTTCTTTTATTGCTGAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTc > 1:2328642/1‑140 (MQ=255) ttGAGAGTGAGGGATATCGCTATGTTTCTTTTATTGCTGAACACTCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCtata < 1:2580607/140‑1 (MQ=255) ttGAGAGTGAGGGATATCGCTATGTTTCTTTTATTGCTGAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCtata < 2:1877122/140‑1 (MQ=255) gAGGGATATCGCTATGTTTCTTTTATTGCTGAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAaatgaa < 1:1190364/140‑1 (MQ=255) gAGGGATATCGCTATGTTTCTTTTATTGCTGAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAaatgaa < 1:5776371/140‑1 (MQ=255) gAGGGAGATCGCTATGTTTCTTTTATTGCTGAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAaatgaa < 1:1841288/140‑1 (MQ=255) aGGGATATCGCTATGTTTCTTTTATTGCTGAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAaatgaat > 2:7099332/1‑140 (MQ=255) gggATATCGCTATGTTTCTTTTATTGCTGAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAaatgaatg < 1:6532227/140‑1 (MQ=255) gggATATCGATATGTTTCTTTTATTGCTGAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAaatgaatg < 1:4997725/140‑1 (MQ=255) gggAGATCGCTATGTTTCTTTTATTGCTGAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAaatgaatg < 2:1182681/140‑1 (MQ=255) tatCGCTATGTTTCTTTTATTGCTGAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGt > 2:3904798/1‑140 (MQ=255) atCGCTATGTTTCTTTTATTGCTGAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTa > 2:3026902/1‑140 (MQ=255) cGCTATGTTTCTTTTATTGCTGAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTaaa > 1:3473596/1‑140 (MQ=255) cTATGTTTCTTTTATTGCTGAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTaaaat > 2:4369778/1‑139 (MQ=255) tATGTTTCTTTTATTGCTGAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGCATGCTGTAAAAGc < 2:2699453/140‑1 (MQ=255) tGTTTCTTTTATTGCTGAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGcac < 2:4257602/140‑1 (MQ=255) cTTTTATTGCTGAACAATCACATCAGCTTGGCCAGCAGATCATTGTTTCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTca > 2:3673051/1‑140 (MQ=255) cTTTTATTGCTGAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTca > 2:6171358/1‑140 (MQ=255) cTTTTATTGCTGAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATAAAAATGAATGCTGTAAAAGCACATTca > 2:2472423/1‑140 (MQ=255) attttATTGCTGAACAAACACATAAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGGCAAAACAAGAGAACTGAGACAGAAGAACATGCAGATTATATAAAAATGAAAGCTGTAAAAACACATAca > 1:7439959/2‑140 (MQ=255) tttATTGCTGAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTcaca < 2:640963/140‑1 (MQ=255) aTTGCTGAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGa < 2:4106020/140‑1 (MQ=255) tGCTGAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGaaa > 1:4576953/1‑140 (MQ=255) cTGAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGACCTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGc > 2:5795617/1‑140 (MQ=255) cTGAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGc > 2:6699395/1‑140 (MQ=255) gAACAATCACCTCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGa < 2:2801350/140‑1 (MQ=255) gAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGa < 2:5220702/140‑1 (MQ=255) gAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGa < 1:428977/140‑1 (MQ=255) gAACAATCACATCAGCTTGGCCAGCAGATCAGTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGa > 1:7028140/1‑140 (MQ=255) cAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGCTGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGtc < 1:152467/140‑1 (MQ=255) cAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGtc < 1:5071541/140‑1 (MQ=255) cAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGtc < 1:3375814/140‑1 (MQ=255) cAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGAGTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGtc < 1:4509057/140‑1 (MQ=255) aaTCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGtct < 1:1273713/140‑1 (MQ=255) tCACATCAGCTTGGCCAGCAGATGATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGACGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCTCATTCACAGGACAGCGAGtctct > 2:7316604/1‑140 (MQ=255) tCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGtctct > 2:147347/1‑140 (MQ=255) tCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGtctct > 2:4801444/1‑140 (MQ=255) acaTCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGACGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCa > 1:5868659/1‑140 (MQ=255) acaTCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCa < 2:3473596/140‑1 (MQ=255) aGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGaa > 2:7733859/1‑140 (MQ=255) ggCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGcac > 2:5347827/1‑106 (MQ=255) ccAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGa > 2:4375730/1‑140 (MQ=255) cagcagATCATTGTTGCTGAAAGGGAGGGAGTGGTCCGTCAAAATAAGAGAACTGAGAAATAAGAATATGCAGATTATATAAAAATGATGGCTGTAAAAGCACATTCACAGGAAAGCGATTCTCTCATTGAACAAACGAc < 2:2913713/140‑1 (MQ=255) cagATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCa > 2:587071/1‑140 (MQ=255) cagATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCa > 2:2095292/1‑140 (MQ=255) cagATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCa > 2:1802734/1‑140 (MQ=255) gATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAAt < 2:3571041/140‑1 (MQ=255) ttgttgCTGAAATTGACGGAGTCGTCCTTAAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTATATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTtgtg < 1:1599433/140‑1 (MQ=255) cTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGACCTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCAt > 2:1077611/1‑140 (MQ=255) cTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCAt > 2:5508231/1‑140 (MQ=255) aGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCt > 1:2015717/1‑140 (MQ=255) aGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCt > 1:6916472/1‑140 (MQ=255) tGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTgg < 1:7733859/140‑1 (MQ=255) cgtccttcAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGa < 2:472297/140‑1 (MQ=255) gtccgtcAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTGTATACAACTGAATGCTGTAAAAGCACATTCACAGGAACCCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGAt < 2:1593503/140‑1 (MQ=255) gtccgtcAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGtc < 2:1058700/89‑1 (MQ=255) tccttcAAAATAAGAGAACTGAGACAGAAGAAGATGCGGATTCTATACAACTGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCTTTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATc < 2:256731/140‑1 (MQ=255) tccgtaAAAAGAAGATAACTGATAAAGAAGAATATGAAGATTATATAAAAATGAATGATTTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTTAAAAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATc < 2:3265923/140‑1 (MQ=255) cgtcAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCaa < 1:6641274/140‑1 (MQ=255) aaaaaaGACCAGAAATTAGACAGAACAACTTGCAGTTTATTAAAAATTGAATTGTGTAAAACCACTTTCACTGGAATCCGAGTATCTAATTTAATAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAAc < 1:1802734/138‑1 (MQ=255) aagaGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGcc < 1:4405289/140‑1 (MQ=255) aagaGAACTGAGACAGAAGAAGATGCAGATTATATACAAATGAATGCTGTAAAAGCACATTCACAGGAACGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGcc < 1:7129636/140‑1 (MQ=255) atataaCTTAGACAGAATTATATGAAGATTCTATAAAAATGAATGCTTTAAAAGCACATTCACATGAAAGCGAGTCTCTAATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCa < 2:6193891/136‑1 (MQ=255) agagAACGGAGGCAGAAGAAGATCCAAGCCATATACAAATGAATGCTGAAATCGATCATTCACAGGAAAGCGATTCTCTCATCGAACAAACGGCACAATTTGTGAAGCATACGCTGGCAAAATCAATCAAACTATCACCa < 1:6773378/140‑1 (MQ=255) agaACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCaga > 1:5346922/1‑140 (MQ=255) agaACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCaga > 1:7215864/1‑140 (MQ=255) agaACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCaga > 1:6343776/1‑140 (MQ=255) aCAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCa > 1:3291110/1‑140 (MQ=255) cAGAAGAAGATGCAGTTTCTATACAAATGAATGCTTTAAAAGCACATTCACCGGAACGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCAt < 1:2472423/140‑1 (MQ=255) cAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAACGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCAt < 2:6959987/140‑1 (MQ=255) cAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACACACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCAt < 1:1057530/140‑1 (MQ=255) cAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCAt < 1:3673051/140‑1 (MQ=255) cAGAAGAAGATGCAGATTATATACAAATGAATGCTGTAAAAGAACATTCACAGGAAAGCGAGTCTCTCATTGAACACACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCAt < 1:3891798/140‑1 (MQ=255) gaagtagaTGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATGGAACAAACGACTCATTTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCATGa > 1:399935/1‑140 (MQ=255) gaagaagaTGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCATGa > 1:5533723/1‑140 (MQ=255) gaagaagaTGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCATGa > 1:283432/1‑140 (MQ=255) aagaagaTGCAGATTCTATACAAATCAATGCTGTAAAACCACATACACAGCAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCATGaa < 2:2125894/140‑1 (MQ=255) agaTGCATATTATATACAAATTAATGGTTTATAAGCACATTCACAGTAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTTGCAAAATCGATCAAACTATCTCCAGAGCGTATTCATGAAGATa < 2:6316420/140‑1 (MQ=255) agaTGCATATACGAGACAAATTCTTGCTGTAAAAGCACATTCCCAGGAAACCGAGTCTCTCATGGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACGATCGCCAGAGCGTATTCATGAAGATa < 2:1002930/140‑1 (MQ=255) agaTGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTTAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCATGAAGATa < 1:3014571/140‑1 (MQ=255) agaTGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCATGAAGATa < 2:6779953/140‑1 (MQ=255) agaTGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAACCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCATGAAGATa < 2:1340048/140‑1 (MQ=255) agaTGCAGATTATATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCATGAAGATa < 2:4879656/140‑1 (MQ=255) tGCATATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCATGAAGATACGa < 2:4558048/140‑1 (MQ=255) tGCAGATTATATACAAATGAATGCTTTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCATGAAGATACGa < 1:6136371/140‑1 (MQ=255) aGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCATGAAGATACGACAt > 2:2379226/1‑140 (MQ=255) aGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCATGAAGATACGACAt > 2:7620594/1‑140 (MQ=255) gATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCATGAAGATACGACAtt > 1:881992/1‑140 (MQ=255) aTTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCATGAAGATACGACATTc < 2:873433/140‑1 (MQ=255) aTTATATAAAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCATGAAGATACGACATTc < 2:1929097/140‑1 (MQ=255) cTATACAATTGATTGTTTTAAAAGCAAATTCACAGGAAAGGCAGTATATCTTTTAAAAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGATCGTATTCATGAAGATACGACATTCgag < 1:925454/140‑1 (MQ=255) cTATACAAATGAATGCTGTAAAAGCACATTCACAGGAACGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCATGAAGATACGACATTCgag < 1:5285934/140‑1 (MQ=255) cTATACAAATGAATGCTGTAAAAGCACATTCACAGGAACGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCATGAAGATACGACATTCgag < 1:2765120/140‑1 (MQ=255) cTATACAAATGAATGCTGTAAAAGCACATTCACAGGAACGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCATGAAGATACGACATTCgag < 1:1333273/140‑1 (MQ=255) cTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCTTTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCATGAAGATACGACATTCgag < 2:2749084/140‑1 (MQ=255) cTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCGAACTATCGCCAGAGCGTATTCATGAAGATACGACATTCgag < 1:2904043/140‑1 (MQ=255) cTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCATGAAGATACGACATTCgag < 2:657577/140‑1 (MQ=255) cTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCACATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCATGAAGATACGACATTCgag < 1:4171714/140‑1 (MQ=255) cTATAAAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCATGAAGATACGACATTCgag < 2:318913/140‑1 (MQ=255) | GCGCTTGAGAGTGAGGGATATCGCTATGTTTCTTTTATTGCTGAACAATCACATCAGCTTGGCCAGCAGATCATTGTTGCTGAAAGTGACGGAGTCGTCCGTCAAAAGAAGAGAACTGAGACAGAAGAAGATGCAGATTCTATACAAATGAATGCTGTAAAAGCACATTCACAGGAAAGCGAGTCTCTCATTGAACAAACGACTCAATTTGTGAAGCATACGCTGGCAAAATCGATCAAACTATCGCCAGAGCGTATTCATGAAGATACGACATTCGAG > NZ_CP034943/1820593‑1820871 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |