| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,169,199 | C→G | 100% | G81G (GGG→GGC) | EO946_RS10950 ← | class I SAM‑dependent methyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,169,199 | 0 | C | G | 98.6% | 992.4 / 2.8 | 286 | G81G (GGG→GGC) | EO946_RS10950 | class I SAM‑dependent methyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (2/2); new base G (162/119); total (164/122) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.14e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 316 total aligned reads displayed.
TTTTCAATCCCAATCACAGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCCCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCACGTTCAGCTGACTTCAGCAGGTTTT > NZ_CP034943/2169062‑2169335 | ttttCAATCCCAATCACAGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTcgcc < 2:1834696/140‑1 (MQ=255)ttttCAATCCCAATCACAGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTcgcc < 1:38085/140‑1 (MQ=255)ttttCAATCCCAATCACAGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTcgcc < 2:5846577/140‑1 (MQ=255)ttttCAATCCCAATCACAGAACCCGTTTCACCTACTGCCATACGTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTcgcc < 2:2402786/140‑1 (MQ=255) tCCCAATCACAGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATg > 2:7021457/1‑140 (MQ=255) ccACTCACAGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGaa < 1:7698728/140‑1 (MQ=255) aTCACAGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCg > 2:761130/1‑140 (MQ=255) aTCACAGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGAATCAAGCg > 2:4716063/1‑140 (MQ=255) cacaGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGtt < 1:4690965/140‑1 (MQ=255) cacaGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGtt < 2:2781813/140‑1 (MQ=255) cacaGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGtt < 1:4254015/140‑1 (MQ=255) cacaGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGtt < 1:4119885/140‑1 (MQ=255) cacaGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGtt < 1:5043786/140‑1 (MQ=255) cacaGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGtt < 1:4872630/140‑1 (MQ=255) cacaGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCCCCCCGTATGAAGCGtt < 1:3550898/140‑1 (MQ=255) aaCCCGTTTCACCTACTGCCATGCTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAAGCGAAAAACGGGTCCCCGTCCGATAAACCCGCTGCCCGACGCCTCGGCTCCTGCTCGCCCCGTATGAAGCGTGTAGcg > 2:1571454/1‑139 (MQ=255) aaCCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGct > 2:1765771/1‑140 (MQ=255) aaCCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGct > 2:6459216/1‑140 (MQ=255) gTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGaa < 2:6242230/140‑1 (MQ=255) tttCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGtt > 2:5201215/1‑129 (MQ=255) tttCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGtt < 1:5201215/129‑1 (MQ=255) ttCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACa < 2:6709826/140‑1 (MQ=255) ttCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACa < 2:1336584/140‑1 (MQ=255) cACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATc < 1:70912/140‑1 (MQ=255) aCCTACTGCCATACTTGCGAGAATGGCATCCGAACCGAGCGCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGACCCGTATGAAGAGTTTAGCTCTGAACATCg < 1:625077/140‑1 (MQ=255) ccTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGc < 1:7586916/140‑1 (MQ=255) tACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTg > 1:7250069/1‑140 (MQ=255) aCTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGtt < 1:6729443/121‑1 (MQ=255) cTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTa > 2:6100008/1‑140 (MQ=255) tGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTAt > 2:5308960/1‑140 (MQ=255) tGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTAt > 2:4744757/1‑140 (MQ=255) tGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTAt > 2:2659162/1‑140 (MQ=255) tGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTAt > 2:3716854/1‑140 (MQ=255) gCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTAtt < 1:4743457/140‑1 (MQ=255) aTACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCgg > 2:7708250/1‑140 (MQ=255) tGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGAGTTTAGCTCTGAACATCTCTGTATTCGCATGaa > 1:6474492/1‑140 (MQ=255) gCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGACGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGaaa > 2:4130584/1‑140 (MQ=255) gCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGct > 2:5104373/1‑114 (MQ=255) gCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCGGTATTCGGATGaaa > 2:6187791/1‑140 (MQ=255) cGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGaaaa < 2:2689729/140‑1 (MQ=255) cGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCACGTATGAAGCGTTTAGCTATGAACATCGCTGTATTCGGATGaaaa < 2:1946062/140‑1 (MQ=255) aTAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGaaaaaa < 1:3613692/140‑1 (MQ=255) aTCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTgg > 2:687379/1‑140 (MQ=255) tCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAAttttga > 2:2540410/1‑137 (MQ=255) tCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGc > 1:4509434/1‑140 (MQ=255) cGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTAGGATGAAAAAAGAATTTGGCAc > 2:7332689/1‑140 (MQ=255) aaCCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATGTGGCACCt > 1:1641026/1‑140 (MQ=255) gAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGtt < 1:5363695/140‑1 (MQ=255) gAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGtt < 1:3038710/140‑1 (MQ=255) gAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCGGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGACCATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGtt < 2:1244527/140‑1 (MQ=255) aGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGttt > 2:7130251/1‑140 (MQ=255) aGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGGTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGttt > 2:4261685/1‑140 (MQ=255) aGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCATGTGCCCGAAGCATCGGCTCCTGCTCGCCACGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGtata < 2:4448283/140‑1 (MQ=255) aGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGtata < 2:2236722/140‑1 (MQ=255) aGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGtata < 1:2549231/140‑1 (MQ=255) tACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGt > 2:6811924/1‑140 (MQ=255) tACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGt < 1:1388731/140‑1 (MQ=255) aCAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGACTATGGCACCTTGTGTCGTATAAAGtt > 2:724485/1‑140 (MQ=255) aCAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGtt > 1:218191/1‑140 (MQ=255) cAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTc > 2:3275048/1‑140 (MQ=255) tCTATAAACGTGTCCCCTTCCGATTAACCAGCTGCCCGAAGCATCGGATCCTGCTCTCCCCGTATGAAGCGTTTATCTCTGAACATCGCTGTATTCGTATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCaaa < 2:1872023/140‑1 (MQ=255) tCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCaaa > 1:6681482/1‑140 (MQ=255) tCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCaaa > 1:460799/1‑140 (MQ=255) aaaaaCGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTAGGACGCGTTTTGCTCTGAACATCGCTGTATTCGGATGAAATAAGAATTTGGCACCTTGTGTCGTATAAAGTTCATACCg > 2:5600759/1‑140 (MQ=255) aaaCGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGct < 1:340833/140‑1 (MQ=255) tgtCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTcgccc > 1:1799862/1‑50 (MQ=255) tgtCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCg < 2:893401/78‑1 (MQ=255) tgtCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCg > 1:893401/1‑78 (MQ=255) tgtCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTg > 1:5714464/1‑140 (MQ=255) tgtCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTg > 1:5801615/1‑140 (MQ=255) tgtCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTg > 2:3050020/1‑140 (MQ=255) tgtCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTg > 1:6425530/1‑140 (MQ=255) tgtCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTg > 2:822160/1‑140 (MQ=255) tgtCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTg > 1:1242366/1‑140 (MQ=255) tgtCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTg > 1:175208/1‑140 (MQ=255) tgtCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTg > 1:7371208/1‑140 (MQ=255) tgtCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTg > 1:7010025/1‑140 (MQ=255) tCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGACCATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGcc < 2:1025133/140‑1 (MQ=255) tCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGcc < 2:2078267/140‑1 (MQ=255) ccTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGAc < 2:3161926/140‑1 (MQ=255) ccTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGAc < 1:683715/140‑1 (MQ=255) cTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGAcc > 1:5420933/1‑140 (MQ=255) aaCCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCGGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCaaa < 2:3514804/140‑1 (MQ=255) aaCCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCaaa > 2:5705537/1‑140 (MQ=255) aaCCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCaaa < 2:6403486/140‑1 (MQ=255) aCCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAAt > 2:110237/1‑140 (MQ=255) aGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAACAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCAc > 2:4005832/1‑140 (MQ=255) cTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCACGt > 1:1214785/1‑140 (MQ=255) cTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCACGt > 1:1106138/1‑140 (MQ=255) cTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCACGt > 2:3384320/1‑140 (MQ=255) cGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGct < 2:2177629/42‑1 (MQ=255) cGAAGCATAGGTTCTTTCTCCCCCTGTAAGAAGCGTTTGGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATACAGCTCAAACCGCTCTTTGCCGACCACAAGCAAATCACGTTCAGc > 2:595970/1‑140 (MQ=255) gAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCACGTTCAGCt < 2:493947/140‑1 (MQ=255) cGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCACGTTCAGCTGACTTca > 1:1627567/1‑140 (MQ=255) cGGCTCCTGCTCGCCCCGGATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCACGTTCAGCTGACTTca > 1:2776775/1‑140 (MQ=255) gttctttcTCCCCCTGTAAGAAGCGTTTGGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATACAGCTCAAACCGCTCTGTGCCGACCACAAGCAAATCACGTTCAGCTGATTTcagc < 1:2428919/133‑1 (MQ=255) gCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCACGTTCAGCTGACTTcagc < 1:2123755/140‑1 (MQ=255) gCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCACGTTCAGCTGACTTcagc < 2:2738894/140‑1 (MQ=255) gCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCAGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCACGTTCAGCTGACTTcagc < 2:4523359/140‑1 (MQ=255) gCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCACGTTCAGCTGACTTCAGCAGGttt > 1:264828/1‑140 (MQ=255) | TTTTCAATCCCAATCACAGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCCCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCACGTTCAGCTGACTTCAGCAGGTTTT > NZ_CP034943/2169062‑2169335 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |