| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,201,029 | C→A | 8.9% | Y216* (TAC→TAA) | EO946_RS16570 → | spore germination protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,201,029 | 0 | C | A | 8.9% | 958.1 / 18.2 | 378 | Y216* (TAC→TAA) | EO946_RS16570 | spore germination protein |
| Reads supporting (aligned to +/- strand): ref base C (135/193); new base A (48/2); total (183/195) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.67e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 394 total aligned reads displayed.
TTTTTGACATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCTTT > NZ_CP034943/3200890‑3201167 | tttttGACATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATac < 2:2237204/140‑1 (MQ=255) gACATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACAtt < 1:4100995/140‑1 (MQ=255) gACATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACAtt < 1:3896879/140‑1 (MQ=255) gACATCAATAATTTGCGCCCTGTTTTAGGCGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACAtt < 1:1442943/140‑1 (MQ=255) aataatTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTGTCCAACTCTTTTTTAGGAATTGAACTGATGCTGTTTATTCCTGAAAATATGAAGAAAAAGAAATACACAATCAGata > 1:1179680/1‑140 (MQ=255) ttGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGc < 1:3238852/140‑1 (MQ=255) cgcCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATTGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTAAGATATGCGGCTGt > 2:6552822/1‑140 (MQ=255) ccTGTTGTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCgg < 2:2460740/140‑1 (MQ=255) tGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTATTCCTGAACATATTAATAAAAAGAAATACAAATTCATATATGCGGGTTTCGGCt > 2:6801782/1‑140 (MQ=255) tAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTATGTATGGAAGTGATGCTGTTTCTTCCTGAAAATATGAACAAAAACAAATAAACAATCAGATATGCGGCTGTCGGCTTTCTg > 2:7331707/1‑140 (MQ=255) tAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCATTTTTAGGAATGGAAGTGATGCTTTTTCTTCATGAACATATGAAGAAAAATAAATACACAATCACATATGCGGCTGTCGGCTTTCTg > 2:1615419/1‑140 (MQ=255) gAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATTCGGCTGTCGGCTTTCTGTTTcc > 2:5817096/1‑140 (MQ=255) gAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGAAGCTGTTTCTTACTGAAACTATGAAGAAAAAGAAAGACACATTCATATATGCGGGGGTCGGCTTTCTGATTcc > 2:6434096/1‑140 (MQ=255) gAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCACTTTTTTAGGCATGGAAGTGATTCTGTTTATTGCTGAACATATTAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGGTGTCTGAttgc > 1:5486147/1‑138 (MQ=255) atgTCTTGGACCCATTGCTAAATATATTAATGTCGTTTAAATATATTTTTTATTAATTGAAGTGATGCTTTTTAATACTTAAAATATGAATAAAAATAAATAAACATTAAGAAATTAGGATGTAGGCTTTCTTATTACGa > 2:4918315/3‑140 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTGCATGTGTTTTTTACTAATTTAATTGATGCTGTTTATTAAAGAAAATATTAATAAAAAGAAATAAACAATAAGATATTCGGATGTGGGCTTTCTGATTcaca > 1:7032319/1‑137 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGa < 1:7442292/140‑1 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGa < 1:658121/140‑1 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGa < 1:863081/140‑1 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGa < 2:6310495/140‑1 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGa < 1:2774947/140‑1 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCAAATCTTTTTTTGGAATGGAAGGGAAGGTGTTTATTACTTAACATATTAAGAAAAAGAAAAACACAATCACATATTCGGCTGTGGGCTTTCTTAttaaga > 1:3347529/1‑136 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTACATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGa < 1:6102820/140‑1 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTACATCTCATTTTTAGGAATTGAAATGATTCAGTTTCTTACTGAACATATGAAGAAAAAAAAATACAAATTAAGATATTAGGCTGTCGGCTTTCTGATTCCgc > 1:1662287/1‑139 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTACATCTATTTTTTAGGAATGGAACTGATGCTGTTTATTCCTGAACAAATGAATAAAAAGAAAAAAACAATCAGATATTCGGCTGTAGGCTTTCTGATTGCGa > 1:6904161/1‑140 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTGTACATCGCTTTTTTAGGAATGGAAGTGATGCTGTTTATTCCTGAACATATGAATAAAAAGAAATCAACATTCAGATATTCGGGTGTCGGCGTGATGATTACgc > 1:4892355/1‑139 (MQ=255) aGGTATTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGa < 2:7058855/140‑1 (MQ=255) cTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGTAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGattat < 2:11320/140‑1 (MQ=255) taCCCTTTGCTAACTCTCTTACTGTGGTTTCCATATATTTTTTAGGAATGTAAGTGATGCTGTTTCTTCCTGAAAATATTAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTAttttt < 2:4771797/139‑2 (MQ=255) aCCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTtat < 1:4375756/140‑1 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTGCATCTCTTTTTTATGAATTGAAGTTATGCTGTTTATTCCTGAACAAATGAAGAAAAATAAATAAACATTCACATATTCGGCTGTAGGCTGTCTGATTACGATTATTTtatataa > 1:6485276/1‑139 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTGCATCTCTTTTTTATGAAAGGAAGTGATGCTGTTTATTCCTGAAAATATGAAGAAAAAGAAATAAACAATAAGATATGCGGCTGTCGGGTTTCTGATTACGATTATTTTatatat > 1:2958760/1‑140 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATTGAAGTGATTCTGTTTGTTTCTTAACAAATGAAGAAAAATAAATAAAAATTAAGAAATTCGGCTGTAGGCTTTGTTATTGGGATTTTTTTatatat > 1:4015272/1‑140 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATTCTGTTTGTTACTGAACATATGAAGAAAAATAAAAAAACAATAAGATATGCGGCTGTCGGCGTTGTGATTACGATTATTTTatatat > 1:2815314/1‑140 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGTAAAAGAAATACACATTCATATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTatatat > 2:5174109/1‑140 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAACTGATGCTTTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCACATATTCGGCTGTCGGCTTTCTGATTCCCATTATTTTatatat > 2:717830/1‑140 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTCCATCTATTTTTTAGGAATGGAACTGATTCTGTTTCTTACTGAAACAATGAAGAAAAATAAATAAACAATAAGATATTCGGCTGTCTGCTTTATGAATCCGATTAATTTataaat > 2:5466583/1‑140 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTACCTCGGTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCATGAACATATGAAGAAAAAGAAATACACATTGAGTTATGCGGCTGTGGGGTTTGTGTTTCCGATTATTTTatatat > 1:5035744/1‑140 (MQ=255) aTTGCTAACTCTCTTACTGTCGTGTCCATCTCTTTTTTTTGAATTGAAGTGATGCTGTTTGTTACTGAAAATATTAAGAAAAAAAAATACAAAAAAATATATTCGGCTGTGGGCTTTGTGTTTCGGATTATTTTatatat > 1:983268/1‑140 (MQ=255) ttGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATc < 1:4558349/140‑1 (MQ=255) ttGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATc < 1:5984659/140‑1 (MQ=255) aaCTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGAc < 2:3942717/140‑1 (MQ=255) ctctctTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACat < 2:7597975/140‑1 (MQ=255) ctctTACTGTCGTTTGCATCGCTTTTTTAGGAATGGAAGTGATGCTGTTTATTGCTGAACAAATGAAGAAAAAGAAATACACATTCAGATATTCGGCTGTCGGCTTTGTGATTCCGAGTATTTTATATATACTGACaaat > 1:2658954/1‑140 (MQ=255) ctTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGt < 2:722554/140‑1 (MQ=255) ctTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCGGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGt > 2:5650146/1‑140 (MQ=255) cgtACTGTCGTGTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGt < 2:6606840/138‑1 (MQ=255) ttACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAACAAAAAGAAATACACATTCAGATATGCGGCTGTAGGCTTTCTGATTCCGATTATTTTATATATACTGACatattta > 2:7480730/1‑137 (MQ=255) tACTGTCGTTTCCAACTCTTTTTTATGAATTGAAGTGATGCTGTTTCTTCCTGAACATATTAATAAAAAGAAAAACACATTCAGAAATGCGGCTGTCGGCTTTCTGATTACGAGTATTTTATATATACTGACatatttaa > 1:2012298/1‑136 (MQ=255) aCTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCAt < 1:5301212/140‑1 (MQ=255) cTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATc < 1:1384554/140‑1 (MQ=255) tttCCATCTCTTTTTTAGGAATGGAAGTGATTCTGTTTCTTCCTTAACATATTAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATTTATACTTACATATGTCATCgttgtt < 2:298653/140‑1 (MQ=255) tttCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCgttgtt < 1:6848128/140‑1 (MQ=255) aTCTCTTTTTTACGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCGTTCTGATTCCGATTATTTTATATATCCTTACATATGTCATCGTTGTTGGGGc > 2:1828454/1‑140 (MQ=255) ttttttAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGa < 2:437045/140‑1 (MQ=255) tttttAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGAc < 1:7268068/140‑1 (MQ=255) tttttAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGAc < 1:5670112/140‑1 (MQ=255) ttAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGc < 2:6694603/140‑1 (MQ=255) aTGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACAGATTCAGATATGCGGCTGTCGGGTTTCTGATTCGGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGa > 1:7187663/1‑140 (MQ=255) aTGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGa > 2:7431302/1‑140 (MQ=255) aTGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGa > 2:1486196/1‑140 (MQ=255) aTGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGa < 1:7526042/140‑1 (MQ=255) aTGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAAc < 2:2324149/140‑1 (MQ=255) aTGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAAc > 1:1904396/1‑140 (MQ=255) aTGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAAc > 1:7711259/1‑140 (MQ=255) gCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGc > 2:4657384/1‑140 (MQ=255) tttCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGat > 2:3562993/1‑140 (MQ=255) tttCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGat > 2:6192071/1‑140 (MQ=255) tcttcCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGatat > 2:4150031/1‑140 (MQ=255) tcCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGc < 1:1002285/140‑1 (MQ=255) tcCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGc > 2:3392659/1‑140 (MQ=255) tcCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGc < 2:4995436/140‑1 (MQ=255) tcCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGc < 2:5355955/140‑1 (MQ=255) tcCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGc < 2:2528298/140‑1 (MQ=255) tcCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGc < 2:2772123/140‑1 (MQ=255) ccTGAACATATGAAGGAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGcc > 2:3154484/1‑140 (MQ=255) ccTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGcc > 2:4859658/1‑140 (MQ=255) ccTGAACATATGAAGAAAAAGAAATACACATTCAGATACGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGcc < 2:2396595/140‑1 (MQ=255) aaCATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACt > 1:1121763/1‑140 (MQ=255) aaCATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGACTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACt > 1:2184878/1‑140 (MQ=255) aCATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACta < 1:4777159/140‑1 (MQ=255) cATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACtat < 2:3677728/140‑1 (MQ=255) cATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACtat < 2:3283724/140‑1 (MQ=255) tatGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTatat < 2:6853265/140‑1 (MQ=255) tatGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTatat < 1:3500518/140‑1 (MQ=255) atGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATGCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACAGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATAtc > 2:2595354/1‑140 (MQ=255) aagaagaaAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATAtc > 2:2826716/3‑140 (MQ=255) tGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATAtct < 2:193533/140‑1 (MQ=255) tGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATAtct < 2:4323542/140‑1 (MQ=255) tGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATAtct < 2:6904034/140‑1 (MQ=255) tGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATAtct < 1:6358421/140‑1 (MQ=255) tGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATAtct < 2:5519481/140‑1 (MQ=255) aagaaaTACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCa < 2:445636/140‑1 (MQ=255) aagaaaTACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCa < 2:2001230/140‑1 (MQ=255) aagaaaTACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCa < 2:4015272/140‑1 (MQ=255) agaaaTACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAg < 2:592147/140‑1 (MQ=255) gaaaTACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGt < 2:7006401/140‑1 (MQ=255) gaaaTACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGt < 2:7089299/140‑1 (MQ=255) acacATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCttt < 1:7082637/140‑1 (MQ=255) acacATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCttt < 2:6229609/140‑1 (MQ=255) | TTTTTGACATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCTTT > NZ_CP034943/3200890‑3201167 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |