| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,201,042 | G→T | 9.6% | A221S (GCG→TCG) | EO946_RS16570 → | spore germination protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,201,042 | 0 | G | T | 9.6% | 1022.4 / 23.1 | 406 | A221S (GCG→TCG) | EO946_RS16570 | spore germination protein |
| Reads supporting (aligned to +/- strand): ref base G (145/207); new base T (50/3); total (196/210) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.74e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 422 total aligned reads displayed.
TTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCTTTGAGCTCAAAGGACT > NZ_CP034943/3200907‑3201181 | ttGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGc < 2:1882181/140‑1 (MQ=255) catGTTTTCGGTGTATGTCGTGGACCCATTGCCAACTCTCTTCCTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTTTTTCTTCCTTAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGATGTCgt < 2:2461443/138‑2 (MQ=255) tGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTATTCCTGAACATATTAATAAAAAGAAATACAAATTCATATATGCGGGTTTCGGCt > 2:6801782/1‑140 (MQ=255) tAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTATGTATGGAAGTGATGCTGTTTCTTCCTGAAAATATGAACAAAAACAAATAAACAATCAGATATGCGGCTGTCGGCTTTCTg > 2:7331707/1‑140 (MQ=255) tAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTGTTTAGGAATGGAAGTTATGCTGTTTCTTACTGTACATATGAATAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTATg > 2:2066880/1‑140 (MQ=255) gAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCCTCTATTTTTTATGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGCAAAAGAAATACACATTCATATATGCGGCTGGCGGCTTTATGATTcc > 2:1718056/1‑140 (MQ=255) gAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTcc < 2:1541367/140‑1 (MQ=255) aGGTCTTGGACCCATTGCTACCTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGa < 2:6675213/140‑1 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTTGGAATGGAAGTGATGCTGTTTGTTCCTGAACATATGAAGAAAAAGAAATAAACAATAAGATATTCGGCTGTGGGCTTTCTGATTCCGa > 1:2911296/1‑140 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTATGAATGGAACTGATGCTGTTTCTTCCTGAAAATATGAATAAAAATAAATACACAATCAGATATGCGGCTGTCGGCTTTCTGATTACGa > 1:5546547/1‑140 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAATAAATAAACAATCAGATATTAGGCTGTGGGGGTTCTGATTGCGa > 1:592147/1‑140 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGa < 1:7442292/140‑1 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCGTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTTATTCCGa < 1:2806785/140‑1 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCGTTTTTATGAATGGAATTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTGTGATTCCGa > 1:4821465/1‑140 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCATTTTTAGGAATGGAAGTGATTCTGTTTGTTCCGGAACATATGAATAAAAAGAAAAAAACAATCAGATATGCGGCTGTCGGCGTTATGATTACGa > 1:1967665/1‑140 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCAGCTCTTTTTTAGGAATGGAAGTGATTCTGTTTCTTGCTGAACATATGAAGAAAAAGAAATAAACATTCAGAAATGCGGCTGTCGGCGGTATGATTCCgt > 1:1411245/1‑139 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTGTCCATCTCTTTTTTAGGCATGGAAGTGATGCTGTTTCTTCCTGAACATAGGAAGAAAAAGAAATACACAATCAGATATGCGGCTGTCGGGTTTCTGATTCGGa > 2:626887/1‑140 (MQ=255) aGGTCTTGGACCCATTGCTAACTCACGTACTGTCGTTTACATCTCATTTTTATGAATGGAAGTTATGCTGTTTATTACTGAAAAAATTAAGAAAAATAAATACAAATTCATATATGCGGCTGAGGGCGTTATAATTCGGa > 2:3378228/1‑140 (MQ=255) cTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGattat < 2:6595176/140‑1 (MQ=255) ttGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGc > 2:7027168/1‑115 (MQ=255) ttGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGc < 1:6886463/115‑1 (MQ=255) ttGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGattatt < 2:1046769/140‑1 (MQ=255) ttGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGattatt < 2:3648925/140‑1 (MQ=255) taCCCTTTGCTAACTCTCTTACTGTGGTTTCCATATATTTTTTAGGAATGTAAGTGATGCTGTTTCTTCCTGAAAATATTAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTAttttt < 2:4771797/139‑2 (MQ=255) gACCCTTTGCTAAGTCTCTTAGTGTCGTTTCAATATATTTTTTAGGAATTGAAGTTTTGATTTTTCTACCTTAAAATTTGAAGAAAAAGAAATACACATTAAGATATGCGGGTGTCGGCTTTCTTATTCCGATTATTTta < 2:4993883/140‑1 (MQ=255) aCCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTtat < 1:7069283/140‑1 (MQ=255) aCCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTtat < 1:4375756/140‑1 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTGCATCTCTTTTTTATGAATTGAAGTTATGCTGTTTATTCCTGAACAAATGAAGAAAAATAAATAAACATTCACATATTCGGCTGTAGGCTGTCTGATTACGATTATTTtatataa > 1:6485276/1‑139 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTCCATCTGTTTTTTAGGAATGGAAGTGATTCTTTTTCTTCCAGAAAAAATGAATTAAAATAAATAAACATTAAAATATGCGGCTGTCGGCTTTATTATTACGATTAATTTatatat > 2:2553566/1‑140 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTCCATCTGTTTGTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAATAAAAAGAAATAAAAATTCATCAATTCGGCGGTCGGCGTTGTGATTGCGGTTATTTTatatat > 1:841712/1‑140 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTTGGAATTGAAGTGATTCTGTTTCTTACTTAACAAATTAAGAAAAATAAATAAACATTAAGATATTCGGCTGTCGGCTTTCTGATTCCGATTATTTTatatat > 1:3574686/1‑140 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAATAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTatatat > 2:7082637/1‑140 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGTAAAAGAAATACACATTCATATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTatatat > 2:5174109/1‑140 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTatatat > 2:3500518/1‑140 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTCCATCTATTTTTTAGGAATGGAACTGATTCTGTTTCTTACTGAAACAATGAAGAAAAATAAATAAACAATAAGATATTCGGCTGTCTGCTTTATGAATCCGATTAATTTataaat > 2:5466583/1‑140 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTCCAACTCTTTTTTAGGAATGGAAGTGATGCAGTTTCTTCCTGAAAATATGAAGAAAAAGAAATAAAAATTCAGATATGAGGCTGTCGGCGTTCTGATTACGATTATTTtaaattt > 2:7125954/1‑138 (MQ=255) ttGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATc < 2:2704000/140‑1 (MQ=255) tGCTAACTCTCTTACTGTCGTTTCCCTCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTGCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATcc > 2:6358421/1‑140 (MQ=255) gCTAACTCTCTTACTTTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACTTTCAGATATTCTGATGTCGGCTTTCTGATTCCGATTATTTTatatatgtt < 1:1373290/140‑4 (MQ=255) aaCTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGAc < 2:3942717/140‑1 (MQ=255) ctctctTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACat < 2:7597975/140‑1 (MQ=255) tctTACTGTCGTTTCCATCTGTTTTTTAGGAATGGAAGTGATGCTGTTTATTCCTGAACATATGAAGAAAAATAAATAAACATTCAGATATGCGGCTGTCGGCTTTGTGATTGCGATTATTTTATATATCATGACATATg > 1:5105677/1‑140 (MQ=255) ctTACTGTCGTTTCAATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGt < 2:5841783/140‑1 (MQ=255) ttACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAACAAAAAGAAATACACATTCAGATATGCGGCTGTAGGCTTTCTGATTCCGATTATTTTATATATACTGACatattta > 2:7480730/1‑137 (MQ=255) cTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATc < 1:336441/140‑1 (MQ=255) cTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATc < 1:6990148/140‑1 (MQ=255) cTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATc < 2:6947573/140‑1 (MQ=255) gTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCgt < 1:6117935/140‑1 (MQ=255) tCGTTTGCAGCTCTTTTTTAGGCATGGAAGGGCTGCTGTTTCTTGCGGTACAGAGGACGAAAAAGAAATACACATTCAGATATGCGGCTGGCGGCTTTCTGGAGGCGGTTATGTTATATATGGTGACAGATGTCATCgtg > 2:4176955/1‑139 (MQ=255) tCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTATTCCTGAACAAATGAAGAAAAAGAAATACAAATTCAGATATGCCGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATAAGTCATCggt > 2:2798497/1‑138 (MQ=255) gTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGa < 1:4069073/106‑1 (MQ=255) gTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACAATCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTAATTTATATATCCAGACATATCTCATCgttgt > 2:1982568/1‑140 (MQ=255) tttCCATCTCTTTTTTCGGAATGGAAGTGATGATGTTTATTCCTTAACATATGAAGAAAAAGAAATACACATTCAGATTTTCGGATGTCGTCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCgttgtt < 1:1901537/140‑1 (MQ=255) tttCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCgttgtt < 1:1558168/140‑1 (MQ=255) tttttAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTTGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGAc < 2:436278/140‑1 (MQ=255) tttttAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGAc < 1:7268068/140‑1 (MQ=255) tttAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCg < 1:2724507/140‑1 (MQ=255) aTGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAATAAATACACATTCAGATATGCGGCTTTGGGCTTTCTGATTCCTATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGa < 1:717830/140‑1 (MQ=255) aTGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGa > 1:3302355/1‑140 (MQ=255) aTGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGa > 2:7431302/1‑140 (MQ=255) aTGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGa < 1:7526042/140‑1 (MQ=255) aTGCTGTTTCTTCCTGAACATATGAAGAAGAAGAACTACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTCTGTTATATATCCTGACATAGGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGaaacc > 1:4677918/1‑138 (MQ=255) aTGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAAc < 2:3042190/140‑1 (MQ=255) aTGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAAc > 1:7711259/1‑140 (MQ=255) aTGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAAc > 1:5355955/1‑140 (MQ=255) aTGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAAc > 1:317766/1‑140 (MQ=255) aTGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAAc < 2:2324149/140‑1 (MQ=255) gCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGc > 2:4657384/1‑140 (MQ=255) tcttcCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGatat > 1:2140745/1‑140 (MQ=255) tcCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGc < 1:1002285/140‑1 (MQ=255) tcCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGc < 2:5355955/140‑1 (MQ=255) ccagAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGcc < 2:5936977/137‑1 (MQ=255) ccTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGcc > 2:4859658/1‑140 (MQ=255) ccTGAACATATGAAGAAAAAGAAAGACACAGTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGcc < 2:2397786/140‑1 (MQ=255) tGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGAGTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGa < 1:957931/140‑1 (MQ=255) aaCATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACt > 1:1121763/1‑140 (MQ=255) tatGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTatat < 1:4967959/140‑1 (MQ=255) tatGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTatat < 2:6853265/140‑1 (MQ=255) tatGAAGAAAAAGAAATACACATTCAGATATGAGGCTGTCGGCTTTCTTATTCCGATTATTTTATATATCCTGACATATGTCATAGTTGTTTGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCAGAatatat < 2:7219002/140‑1 (MQ=255) tGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATAtct < 1:3931523/140‑1 (MQ=255) tGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATAtct < 1:6358421/140‑1 (MQ=255) gaagaaAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATAtctc > 2:5651055/1‑140 (MQ=255) aaagaaaTACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTc > 1:6603523/1‑140 (MQ=255) aagaaaTACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCa < 2:445636/140‑1 (MQ=255) aagaaaTACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCa < 2:317766/140‑1 (MQ=255) aagaaaTACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCa < 2:4015272/140‑1 (MQ=255) gaaaTACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGt < 2:2881687/140‑1 (MQ=255) gaaaTACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTAGATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGt < 2:6202785/140‑1 (MQ=255) tACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATGAGGTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGAGATGGCCGACTATATCTCTCTTTCAGTCCtt > 2:6444651/1‑140 (MQ=255) acacATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCttt < 2:5561055/140‑1 (MQ=255) tCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCTTTGAGCTc > 1:5669575/1‑140 (MQ=255) tCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCTTTGAGCTc > 2:1326895/1‑140 (MQ=255) cAGATATGCGGCTGTGGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCTTTGAGCTCa < 1:447401/140‑1 (MQ=255) cAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCTTTGAGCTCa < 2:4145573/140‑1 (MQ=255) tatGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATgg > 2:6742499/1‑102 (MQ=255) tatGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATgg < 1:6742499/102‑1 (MQ=255) gCGGGTGTCGGCTTTCTGAGTCCGATTATTTTATATATCCTGACATATGTCATCGTTGGTGGGGCTTTCACCGCTCCCGAGGTGAAAACCCTGATATGGCCGCCTAGATATCTCTATCAGGCCTGTGAGCTCCAAGGAca > 2:4924320/1‑139 (MQ=255) gCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCTTTGAGCTCAAAGGACt > 1:2527148/1‑140 (MQ=255) gCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCTTTGAGCTCAAAGGACt > 2:3687375/1‑140 (MQ=255) gCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCTTTGAGCTCAAAGGACt > 1:1205339/1‑140 (MQ=255) | TTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCTTTGAGCTCAAAGGACT > NZ_CP034943/3200907‑3201181 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |