| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP034943 | = 607210 | 238 (1.350) | 30 (0.170) | 10/264 | 6.5 | 12.6% | coding (53/1125 nt) | EO946_RS03185 | collagen‑like protein |
| ? | NZ_CP034943 | 607526 = | 181 (1.040) | coding (369/1125 nt) | EO946_RS03185 | collagen‑like protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/607077‑607210‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGG > NZ_CP034943/607526‑607588 ATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAC > 1:71465/1‑140ATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCAGGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGAcctac > 2:274378/1‑135 GCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGACGCCGGACCACCCGGAGCGACAGGAGCc > 1:783709/1‑139 AGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACGGGAGCGAC > 1:734821/1‑140 AGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTAC > 2:2482140/1‑140 AGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCAGGGAGTCATGGGAGCCACAGGAGCTACCGGGGACGCCGGACCACCCGCAGCGACAGGAGCCAC > 2:271237/1‑140 TGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCCTGGGAGCCACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCCACAGGAGCGACCG > 2:2487666/1‑140 TGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACCGGAGCTACCGGGGAAGCCGGAGCAGCCGGAGCGACAGGAGCGACgg > 2:2363601/1‑138 TGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCTACCGGAGCCACCG > 2:152146/1‑140 TGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCCACCG > 2:2026157/1‑140 ACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCCACCGGCGCAACCGG > 2:693485/1‑140 AGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAG < 1:166276/140‑1 CCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCAACCGGGGCAGCCGGAGAAACCGGAGCCACCGGAGCCACCGGAGCgaa > 2:2543595/1‑137 ACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGACGGACCACCCGCAGCCACCGGAGCGACCGGGGaagacg > 2:500318/1‑134 GCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGG < 2:152897/53‑1 GCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGG < 2:1808898/53‑1 GCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCCACCGG > 1:1808898/1‑53 GCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCCACCGG > 1:152897/1‑53 GCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGG > 2:526272/1‑35 GCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGG > 2:400116/1‑35 GCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGG > 2:2541134/1‑35 GCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGG > 2:2508829/1‑35 AGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACA > 2:156292/1‑37 AGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACA < 1:156292/37‑1 ACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTA < 1:1945319/37‑1 ACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTA < 1:1250161/37‑1 ACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTA < 1:1391848/37‑1 ACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTA < 1:1391877/37‑1 ACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTA > 2:1391877/1‑37 ACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTA > 2:1391848/1‑37 ACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTA < 1:2587283/37‑1 GCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAG > 1:1409516/1‑37 GCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAG < 2:1146503/37‑1 GCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAG > 1:1146503/1‑37 caGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGG < 2:1652682/65‑1 caGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGG > 1:1652682/3‑67 ATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/607077‑607210‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGG > NZ_CP034943/607526‑607588 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |