Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP034943 | 549,085 | 0 | C | A | 22.8% | 332.0 / 31.3 | 171 | Q33K (CAA→AAA) | EO946_RS02865 | PLP‑dependent aminotransferase family protein |
Reads supporting (aligned to +/- strand): ref base C (68/64); new base A (0/39); total (68/103) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.51e-11 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 172 total aligned reads displayed.
GTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGC > NZ_CP034943/548947‑549221 | tttCACACAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCaaa < 2:792168/140‑1 (MQ=255) tttCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCaaa < 2:195789/140‑1 (MQ=255) cacaAAAAAATGCATACCAGTTATGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATGTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAATCATGCATCAGGGGCGTATTCAAAAAg < 2:2024210/140‑1 (MQ=255) gCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTc < 2:2511062/140‑1 (MQ=255) gTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCaa > 1:109254/1‑140 (MQ=255) gTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCaa > 2:1043585/1‑140 (MQ=255) gTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCaa > 2:366420/1‑140 (MQ=255) gTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCaa > 2:361190/1‑140 (MQ=255) ttAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCaaa > 2:1764981/1‑140 (MQ=255) aacaacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCTCTATTTCAAAGAAAACATGCATCAGGGGCGAATTCAAAAAGGAATGAAGCTCCCTTCAAAAAGACTcc > 1:1119306/1‑140 (MQ=255) aacaacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTcc > 1:527317/1‑140 (MQ=255) aacaacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTcc > 2:199944/1‑140 (MQ=255) caacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTg > 2:1089868/1‑140 (MQ=255) caacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTg > 2:2357629/1‑140 (MQ=255) cccAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCg > 2:958918/1‑140 (MQ=255) aaaTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGt < 2:718142/140‑1 (MQ=255) aaaTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGt < 1:2603905/140‑1 (MQ=255) aaaTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGt < 2:613905/140‑1 (MQ=255) tGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAg < 2:620547/140‑1 (MQ=255) gATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCt < 2:1963861/140‑1 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGc < 2:26071/129‑1 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCttt > 2:1290219/1‑140 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATGCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGc > 1:26071/1‑129 (MQ=255) atCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTc < 2:2430926/133‑1 (MQ=255) atCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTc > 1:178226/1‑140 (MQ=255) cACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCa < 2:1838404/140‑1 (MQ=255) cACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCa < 2:206635/140‑1 (MQ=255) cACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCa < 2:1219385/140‑1 (MQ=255) aCGCTTTTTTTTAATAGAAATCTGTTTATTCCGATTTATTAGCAGCTTTATCGCTATTTCAAATAAAACATGAATCTGGGGCTTATTCAAAAAGTAATGAAGCTCCCTTCCAAAAGACTCCTGGCTTGTCAGCTTTCCAt < 1:2451375/140‑1 (MQ=255) cGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATc < 2:2563112/140‑1 (MQ=255) gCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCa > 1:1501704/1‑140 (MQ=255) gCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCa > 1:133577/1‑140 (MQ=255) cTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGt > 1:155582/1‑140 (MQ=255) cTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGt > 2:2651457/1‑140 (MQ=255) cTTTTTTGAATAGAAATAGGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAACGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGt < 1:652622/140‑1 (MQ=255) ttttttAATATAATTGTGTATATTCCGTTTTATCAGCTGTTTTATCGATTTTTCAAAGAAAACATGCATCCGGGGCGTATTAAAAAAGGAATGAAGCTCCCTTCAAAACGACTCCTGGCGATTAAGCTTTCCATCAGTCa < 2:285115/140‑1 (MQ=255) tttttGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCa > 1:1078689/1‑140 (MQ=255) tttttGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCa > 1:2572323/1‑140 (MQ=255) tttttGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCa > 1:2111379/1‑140 (MQ=255) ttttAATATAAATATGTATATTCCTCTTTATCAGCAGCTTTATCGATATTTCAAATAAAAAATGCATCAGGGGCTTATTCAAAATGTAATGAAGCTCCCTTCAAAAAGACTCCTGGCGAGTAAGCTTTCCATCAGTCaaa < 2:2568693/140‑1 (MQ=255) ttttAATAGAATTGTGGATATTCCGATTTATCAGCAGTTTTATCGCTTTTTCAAACAAAACATGCATCTGGGGCTTTTTAAAAATGTAATGAAGCTCCCTTCCAAAAGACTCCGGGCGATTAAGCTTTCCATCAGTCaaa < 2:2487936/140‑1 (MQ=255) tttGAATATAAATGTGTATATTCCGCTTTATCAGCAGCTTTATCTATATTTAAAAGAAAACATGCATCCGGGGCGTATTAAAAAAGGAATGAAGCTCCCTTCCAAAACACTCGTGGCTAGTCAGCTTTCCATCAGTCaaa < 2:777777/140‑1 (MQ=255) aTCTGTATATTCCGCTTTAGCACCAGCTTTACCGCTATTACAAAGAAAACATGCATCAGGGGCTTATACAAAAAGTAATGAAGCTCCCTTCCAAAACACTCCTGGCGAGTCAGCTTACCATCAGTCAAACGACTGTAGaa < 2:2633101/140‑1 (MQ=255) cTGTATATTCCTCTTTATCAGCAGCTTTATCGATTTTTAAAACAAAACATCCAGCCGGGGCTTATAAAAAAAGCAATGAAGCTCCCTTCCACAACACTCCTGGCGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACg < 1:958918/140‑1 (MQ=255) cTGGATATTCCGTTTTATCAGCAGCTTTATCTCTATTTCAAAGAAAACAGGAATCAGGGGCGTATTAAAAAAGGAATGACGCTCCCTTCAAAACGACTCCTGGCGAGTCAGCTTACCATCAGTCAAACGACTGTAGAACg < 2:1501704/140‑1 (MQ=255) tCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAATCATGCATCCGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATg > 1:760030/1‑140 (MQ=255) cgatttAACAGAAGCTTTAGCGCTATTTCAAACAAAACATGCATCAGGGGCGTATACAAAAAGGATTGAAGCTCCCTTCCAAACCCCGCCTGGCGCGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGaa < 2:1699958/137‑1 (MQ=255) cGCTTTATCAGCAGCTTTAGCGCTATTTAAAACAAAACATGCATCAGGGGCGTATTAAAAAAGCAATGACGCTCCCTTCCAAAACACTCCTGGCGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGaa < 2:1561033/140‑1 (MQ=255) cTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGa < 2:2621826/118‑1 (MQ=255) tttATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAg > 1:1840839/1‑140 (MQ=255) ttATCAGCATGTTTATCGCTTTTTCAAACAAAACAGGCATCGGGGGCGTATTAAAAACGCAATGAAGCTCCCTTCCAAACGACGCCTGGCGAGTCAGGTTTCCACCAGACAAACGACTGTAGAACGTGCCTATGAACAGc < 2:318602/140‑1 (MQ=255) ttATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGTAATGAAGCTCCCTTCCAAACGACTCCTGGCGAGTCAGCTTTCCATCCGTCAAACGACTGTAGAACGTGCCTATGAACAGc < 2:536550/140‑1 (MQ=255) tATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCTTATGAACAGCt > 1:554946/1‑140 (MQ=255) ggcTTTATCGCTATTTCAAACAAAACATGCATCCGGGGGTTATTAAAAAAGGAATGACCCTCCCTTCCAAACCACTCCTGGCGAGGCAGCTTGCCATCAGACAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:698504/139‑1 (MQ=255) ggcTTTATCGATATTTCAAACAAAACATGAATCAGGGGCGTATTCAAAAAGGAATGAACCTCCCTACCAAAAGACTCCTGGCGAGTCAGCTTTCCACCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:2671717/139‑1 (MQ=255) agttttATCGATATTAAAAAAAAAACATTCATCTGGGGCTTATTAAAAAAGGAATCACGCTCCCTCCCAAAAGAATCCGGGCGATAAAGCTTCCCAACCGACACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:1632851/137‑1 (MQ=255) agcTTTATCGCTTTTTCACTTAAAACAGGCATCCGGGGCGTTTTCAAAACGGAATGACGCTCCCTTCCAACCGCCGCCTGGCGAGTCAGCTTGCCACCCGACACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:2668996/140‑1 (MQ=255) agcTTTATCGCTATTTCAAATAAAAAATGCATCCGGGGCGTATTAAAAAAGGAATGAAGCTCCCTTCCAAACCACTCCTGGCGAGACAGCTTTCCCTCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:1323364/140‑1 (MQ=255) agcTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTAAAAAAGGAATGAAGCTCCCTTCCAAAAGACCCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:118128/140‑1 (MQ=255) agcTTTATCGCTATTTAAAATAAAACAGGCATCAGGGGCGTATTAAAAAAGGAATGACGCTCCCTTCAAAAAGACTCCTGGCCAGTCAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:1815410/140‑1 (MQ=255) agcTTTATCGCTATTACAAAGAAAACAGGCATCCGGGGCGTATTCAAAAAGGAATGAAGCTCCCTCCCAAACCCCGCCTGGCGTGTCAGCTTGCCATCCGACAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:1078689/140‑1 (MQ=255) agcTTTATCGATATTTCAAACAAAACATGCATCAGGGGCGTATTAAAAAAGTAATGAAGCTCCATTCCAAAACACTCCTGGCGAGTCAGCTTTCCATCAGACACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:1942207/140‑1 (MQ=255) agcTTTATCGATATTACAAACAAAAAATGCATCCGGGGCTTATTAAAAAAGGAATGAAGCGCCCTTCCAAAACACGCCTGGCGAGACCGCTTTCCACCAGACACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:135798/140‑1 (MQ=255) agcTTTATCGATAGTTCAAACACAACAGGCATCAGGGGCGTATTCAAATCGCAATGAAGCCCCCTTCCAAAAGACTCCCGGCGAGTCAGCTGTCCATCCCCCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:1622468/140‑1 (MQ=255) agatttATCGCTTTTTAAAACAAAAAATGAATCCGGGGCTTATACAAAAAGCAATCAAGCTCCCTACCAAACCACGCCTGGCGAGTCAGCTTACCACCCCTCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:1409598/137‑1 (MQ=255) agatttATCGATATTTCAACCAAAACATGCATCCGGGGCTTATAAAAAAAGTATTGAAGCTCCCTTCAAAAACACCCCGGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:2233322/137‑1 (MQ=255) acttttATCGCTATTACCAAAAAAACAGCCACCAGGGGCTTATTAAAAAAGGACTCAAGCTCCCTCCCAAAACACTCGTGGCGCGAACGCTTACAATCAGCCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:409087/137‑1 (MQ=255) accTTTATCCCTATTTCACACAAAACATGCATCTGGGGCGTATCAAAAAATGAATCAAGCTCCCTACCAAAAGCCTCCTGCCGAGTCTCCTTTCCATCCGCCCCACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:78385/138‑1 (MQ=255) gcTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGctgctg > 1:2380406/1‑140 (MQ=255) cTTTTTCGTTATTTCAATGAAATCATGCATCTGTGTGGTTTTAAAAATCGATTGAAGCTCCGTTACAAAACTCTGTTGGCGAGTGTGTTTTCCTGAATTCACCCGACTGTTGATCGTGCCTATGAACAGCTTGctgctgt < 2:340681/140‑2 (MQ=255) cTTTATCGCTATTTCAAAGAAAACCTGCATCAGGGGCTTATTCAAAACGGAATGACGCCCCCTTCCAAACCCCTCCTGGCGAGTCAGCTTTCCAACAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:863706/140‑1 (MQ=255) cTTTAGCGCAATTTCAAACAAACAATCACTCCGGGGCTTTTTCAAAAAGGATTTATGAGCCCTTCAAAAAGACTCCGGGCGAGTCACCTTCCCATCAGAAAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:2280298/140‑1 (MQ=255) atttATCGCTATTAAAAACAAAACATGCATCAGGGGCGTATACAAAAAGGAATTAAGCTCCCTTCCAAAACCCCCCTGCCGAGTCAGCTTTCCATCAGTAAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:2576476/139‑1 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATc > 2:1277026/1‑140 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATc > 1:2671717/1‑140 (MQ=255) tttCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGACTGAAGCTCCCTTCCAAAAGTCTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCGGAGGGCTATATCg > 2:2597386/1‑140 (MQ=255) tttCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCg > 2:1330008/1‑140 (MQ=255) ttCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTTGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAAAGTGCCTATGAACAGCTTTCTGCTGAGGGCTATATCGt > 2:372467/1‑140 (MQ=255) aataaaaaaTGAATCCGGGGCGTATAAAAAAAGTAATGAAGCGCCCTTCCAAAAGACTCGTGGCGAGTCAGCTTCCCATCAGAAAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 1:1043585/137‑1 (MQ=255) aataaaaCATGCATCTGGGGTTTATAAAAAATGTAATGAAGCCCCCTACAAAAAGACTCGTGGCGATTCTGTTTTCAATCAGACAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 1:361190/137‑1 (MQ=255) aaaaaaaCATGCATCCGGGGGTTTTTAAAAAAGGATTTCAGCGCCCTCCCAAACGACTCCGGGCGAGACAGCTTTCAATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 1:366420/137‑1 (MQ=255) aaGAAAACATGCATCCGGGGCGTATTCAAAAAGGAATGACGCTCCCTTCCAAACCACGCCGGGCGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 1:2316466/140‑1 (MQ=255) aaGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTCTATCGTGAGc > 2:1938245/1‑140 (MQ=255) aaCATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGcc > 1:1419127/1‑140 (MQ=255) cATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCaagaag > 2:2091301/1‑140 (MQ=255) aTCCGGGGCGTATTCAAAAAGGAATGACGCTCCCTACCAAAACACTCCGGGCGAGTCAGCTTCCCAACAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGc < 1:1992198/140‑1 (MQ=255) cAGGGGCGTATTCAAAAATCAATGAAGCTCCCTTCCAAAACACCCCGGGCCAGTCAGCTTTCCATCAGTCCCACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCgg < 1:1529624/140‑1 (MQ=255) ggggCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGAt > 1:1261903/1‑140 (MQ=255) tagacAAACAGCAATGACGCTCCCTCCCCAACGACCCGGGGCCCGGCAGCTTCCCAGCAGGCACACGACTGTAGAACGTGCCTATGACCAGCTTGCTGCGGAGGGCTATATCGTGAGGCAGCCAAGAAGCGGATGGTTTg < 1:736572/136‑1 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCt > 1:1140867/1‑51 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGACGCGGATGGTTTg > 2:1443677/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:1693350/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 2:2148647/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:2183013/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg < 2:1693350/140‑1 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 2:1342618/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:926719/1‑140 (MQ=255) aTTCAAAACCCAATGAAGCGCCCTTCCAAAAGACTCCTGGCCAGTCAGCTTGCCATCCGGAACACGACTGTAGAACGTGCCTATGAACAGCTTGCAGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGc < 1:2623670/140‑1 (MQ=255) aTTAAAAAAGGAATGAAGCTCCCTTCAAAAAGACTCGTGGCGTGTCAGCTTTCCATCAGACAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGc < 1:1656436/140‑1 (MQ=255) aTTAAAAAAGGAATGAAGCTCCCTCCCAAACCACTCCGGGGGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGc < 1:2480244/140‑1 (MQ=255) | GTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGC > NZ_CP034943/548947‑549221 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |