Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0349431,366,1150GC36.5% 134.3 / 32.2 101E205Q (GAA→CAA) ‡EO946_RS07135PepSY domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base G (41/20);  new base C (1/34);  total (42/59)
Fisher's exact test for biased strand distribution p-value = 7.97e-11
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 108 total aligned reads displayed.

CAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATACAAAACAA  >  NZ_CP034943/1365977‑1366254
                                                                                                                                           |                                                                                                                                           
caaAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAaaga                                                                                                                                            >  2:2207101/1‑140 (MQ=255)
caaAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAaaga                                                                                                                                            >  2:1043772/1‑140 (MQ=255)
caaAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCAGGATGATAaaga                                                                                                                                            >  2:1414003/1‑140 (MQ=255)
        acCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTTATCTTCCGGATGATAAAGAAGCGACtg                                                                                                                                    >  2:1961556/1‑140 (MQ=255)
        acCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACtt                                                                                                                                    >  2:2029177/1‑139 (MQ=255)
        acCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACtg                                                                                                                                    >  2:1195579/1‑140 (MQ=255)
          cGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGagtctg                                                                                                                                  >  1:1644446/1‑135 (MQ=255)
          cGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACtgtg                                                                                                                                  >  1:1644458/1‑140 (MQ=255)
          cGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACtgtg                                                                                                                                  >  2:869095/1‑140 (MQ=255)
           gATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGa                                                                                                                                 >  2:2340521/1‑140 (MQ=255)
                   aaaaaCACGCAAACACCCTGGGTGAGCGAGAACCGGGGGGGACAGCGTTTGCCGAATATCTCTAAAAAAGTGAGGGCACTCTAATGTTTGATGTGGTTTTTGATCTTCCGTTGTTTAAAGACGCGACTGTGAAAATTAAt                                                                                                                         <  2:1734771/140‑1 (MQ=255)
                                accctttGCTGAGCTATAACGGGGGGGGACAGCGGATGACGAATAACTCAAAAAATGTGAGGCAACTATAATATTTGATGTGTTTGTTTATCTTCCGGATGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGaa                                                                                                            <  1:535610/135‑1 (MQ=255)
                                acccATGGCTGAGCGATAAACGGGCGGTACCGCGAATCACGAAGACATCCAAAAAAGTTAGGGCACTCTAATTTTTGAAGTGTTTTTTTATCTGCGGTTTTATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGaa                                                                                                            <  2:1389529/138‑1 (MQ=255)
                                aaCCTTTGCTGAGCTATAACCGGGCGGGACAGCGTATTACGCAGATCTCTAAAAAAGTGAGGGCACTCTCATCTTTTATGTGTATGTTTATCTTCCGGATTATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGaa                                                                                                            <  2:285701/140‑1 (MQ=255)
                                     ttGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGtt                                                                                                       >  1:2523649/1‑140 (MQ=255)
                                      tGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTg                                                                                                      >  1:971304/1‑140 (MQ=255)
                                      tGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTg                                                                                                      >  2:203381/1‑140 (MQ=255)
                                        gtGAGCGACAACGGGGGGGGACAGCGGATGACGCAGATCTCTAAAAATGTGAGGCCACTCTCATCTTTGATGGGTTTTTTGATGTTCCGTATTAAAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa                                                                                                    <  1:954366/139‑1 (MQ=255)
                                        cTGAGCGAGACCGGGGGGGCACCGGGGATGACGCAGATCTCTAAAAAAGTGAGCGCACTCTAATGTTTGATGTGTTTGTTTATCTTCCGGATGATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa                                                                                                    <  1:2207101/140‑1 (MQ=255)
                                        cTGAGCGAGAACGGGGGGGTACAGGGTATGACCCAGATCCCCAAAAAATTTAGGGAACTATAATTTTTTATGTGTTTTTTTATCTGCCGTTTCATAACCCCGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa                                                                                                    <  1:2282527/140‑1 (MQ=255)
                                        cTGAGCGACAACGGGGCGGGACCGCGGTTGACGCCTATCTCCAAAAAAGTGAGGGCACTCTAATCTTTGATGTGTATTTTGATCTTCGGTATTATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa                                                                                                    <  1:2543334/140‑1 (MQ=255)
                                        cTGAGCGACAACCGGGGGGGACCGCGGATGACGATCATCACCAAAAAAGTGAGGCCACTCTCATATTTGATTTGTTTTTTGATCTGCGGCATTATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa                                                                                                    <  1:2241088/140‑1 (MQ=255)
                                           aGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAAc                                                                                                 >  1:1902046/1‑140 (MQ=255)
                                           aGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAAc                                                                                                 >  1:672968/1‑140 (MQ=255)
                                           aGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAAc                                                                                                 >  2:2427420/1‑140 (MQ=255)
                                            gctataaaCGGGGGGGACAGGGGATCACGCAGACATCAAAAAACGTTTGCGAACTCTCATCTTTTATGTGTTTGTTGATCTTCCGGTTTATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa                                                                                                <  1:2611946/135‑1 (MQ=255)
                                            gCGAGAACGGGGCGGCACCGCGTATGACCCAGAACCCCAAAAACGGGAGGGCACTCTAATTTTTTAAGGGCATTTTGATTTTCCGGATCATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa                                                                                                <  1:1653927/140‑1 (MQ=255)
                                            ccGACAACCGGGGGGCACCGCGGATCACCAAGAGCTCCAAAAAAGGTAGGCCACACAAATGTTTGAAGTGGTTGTTTATCTTCGGGGGGAACCCCAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa                                                                                                <  1:23761/139‑1 (MQ=255)
                                             gcgccaaCGGGGGGGCACCGCGCATCACGCAGATCTCTAAAAAAGTCCGCGCACTCTCATTTTTCACTGGGTTTTTGATGTTCGGTATTATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa                                                                                                <  1:1381180/135‑1 (MQ=255)
                                             cgacacccgggggggACAGCGTCTGCCGCAGATCTCAAAAAACGTGCGGCCACTCTCATCTTTGACGTGGATGTTCATCTTCGGGTTTATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt                                                                                               <  2:2391719/133‑1 (MQ=255)
                                             cgacacccgggggggACAGCGGATGCCGCATATCCCCAAAAAAGTGAGGCCACTCTAATATTTTACGGGGTTGTTGATCTCCCGGTTGATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt                                                                                               <  1:2058016/133‑1 (MQ=255)
                                             ccacaaccgggcgggACCGGGGATGACGAAGACCTCTAAAAATGTGAGGCCACTCTAATCTTTTAAGTGGTTTTTGATCTTCCGGATCATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt                                                                                               <  1:169790/133‑1 (MQ=255)
                                             cGATAACCGGGCGGGACAGCGTATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATTATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt                                                                                               <  2:2372205/140‑1 (MQ=255)
                                             cGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt                                                                                               >  1:2100332/1‑140 (MQ=255)
                                             cGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt                                                                                               >  1:976547/1‑140 (MQ=255)
                                             cGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt                                                                                               >  1:2710787/1‑140 (MQ=255)
                                             cGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt                                                                                               >  1:1467333/1‑140 (MQ=255)
                                             cGACAAACGGGCGGGACAGCGGATGACGCAGATCTCTAAAAACTTGAGGGCACTCTCATCTTTGAAGTGTATGTTGATCTTCCGGATTATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt                                                                                               <  2:2141890/140‑1 (MQ=255)
                                               cgaACCGGGCGGGAAAGCGGTTCACCCAGAACTCCAAAAAAGGGAGGCCACTAACATCTTTTAAGTGTATGTTGATCTTCCGGATGATAAAAACGCGACTGTGAAAATTAAGGCCTACACCGGAAAGGTTGCAAACAGtg                                                                                             <  2:1238685/139‑1 (MQ=255)
                                               agaCACGGGGGGGACCGCGGATCCCGCACAGCGCTAAATAAGTGAGGGCAATCTCATCTTTTAAGTGTATGTTGATGTTCCGGATGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAGtg                                                                                             <  2:765028/140‑1 (MQ=255)
                                               agaACCGGGCGGGACAGCGGATGACGCAGATCTCCAAAAATGTGAGGGCACTCTCATCTTTTATGTGGATGTTGATCTTCCGGATTATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATtg                                                                                             <  2:1729916/140‑1 (MQ=255)
                                               acacccgggcggcACCGCGTATGACCCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGATGTGGTTGTTGATCTGCGGGTTGATAAACCCGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATtg                                                                                             <  1:251869/135‑1 (MQ=255)
                                                gaAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATtgt                                                                                            >  1:1878518/1‑140 (MQ=255)
                                                    ggggcgggACCGGGGTTGACGAATTTCTCTAAAAAATTGAGGGAACACTAATCTTTGAAGTGGATTTTTATATACCGGATGAAAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGCTTGCAAACATTGTGTAt                                                                                        <  1:424935/139‑1 (MQ=255)
                                                    cgggcgggAACGGGTATGACGCACATCACTAAAAAAGTTAGGGCAGAATCATCTTTTAATTGTTTGTTTATCTTCCGGTTGAAAACTCCGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTAt                                                                                        <  2:2355729/140‑1 (MQ=255)
                                                      ggggggACCGCGTATGACGAAGATCTCTAAAAAAGTGAGGGCACTCTCATCTTTTAAGTGGTTGTTGATCTTCCGGATTATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGa                                                                                      <  2:2246708/137‑1 (MQ=255)
                                                      ggcgggCCAGCGGATGACGCAGATCTCGAAAAAAGTGCGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAACCACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGa                                                                                      <  2:64701/140‑1 (MQ=255)
                                                      ggcgggACAGCGGATCCCGCAGAGCTCGAAAAAAGTGAGGGCACTCTAATCTTTGAAGTGGATGTTGATCTCCCGGATTATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGa                                                                                      <  2:835468/140‑1 (MQ=255)
                                                       gcgggACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGAACTCTCATCTTTGAACTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACAGGAAATGATGCAAACATTGTGTATCAg                                                                                     >  1:704992/1‑140 (MQ=255)
                                                         gggACCGCGGATGACGCAGCTCTCTAAAAAAGTCAGGGCACTCTCATCTTTCAAGTGTATGTTTATCTTCCGGATGATAACGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGa                                                                                   <  2:891520/140‑1 (MQ=255)
                                                         gggACCGCGGATGACGCAGATCTCGAAAATAGTGAGCGCACTCTCATCTTTGAAGTGGATGTTGATGTTCCGGATGATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGa                                                                                   <  2:1439641/140‑1 (MQ=255)
                                                         gggACAGGGGATGACGCACATCTCTAAAAAAGGGAGGCCACTCAAATATTTGACGTGGATGTTGATCTGCGGTATCATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGa                                                                                   <  1:2054117/140‑1 (MQ=255)
                                                                 cGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACgg                                                                            >  2:2527642/1‑140 (MQ=255)
                                                                     tcaCGCAGAGCTCGAAAAAAGTGAGGGCACTCTCATATTTGATGTGGATGTTGATCTTCCGGATTATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAACGGTTGCAAACATTGTGTATGAGGACTGACGGGTtc                                                                        <  2:733838/138‑1 (MQ=255)
                                                                      gACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTtct                                                                       >  2:836613/1‑140 (MQ=255)
                                                                      gACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTtct                                                                       >  2:1677823/1‑140 (MQ=255)
                                                                        cGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCtca                                                                     >  2:1554234/1‑140 (MQ=255)
                                                                           aGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCtcatca                                                                  >  2:1177669/1‑140 (MQ=255)
                                                                             aTCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCaaa                                                                >  2:795047/1‑140 (MQ=255)
                                                                             aTCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCaaa                                                                >  2:876492/1‑140 (MQ=255)
                                                                             aTCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCaaa                                                                >  2:170801/1‑140 (MQ=255)
                                                                             aTCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCaaa                                                                >  2:1659780/1‑140 (MQ=255)
                                                                                  gAAAAAAGTGAGGGCACTCTCATCTTTGACGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATtctc                                                           >  2:1787963/1‑140 (MQ=255)
                                                                                  gAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTTTGAGGACTGACGGGTTCTCATCAAATtctc                                                           >  2:1787907/1‑140 (MQ=255)
                                                                                         gTGAGGGCACTCTCATGTTTCCCGTGGGTGTGGAGCGTCCGGATGATCAACAAGGGCATGGGGACATTAATGCCTACACCCGCCCGGGGGCCACCCTTGTGGCGGAGGACTGACGGGTTCTCAGCAAAGTCTCATCGTtc                                                    >  2:1031805/1‑140 (MQ=255)
                                                                                                cACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGtt                                             <  1:1661227/140‑1 (MQ=255)
                                                                                                cACTCTAATCTTTTATGTGGATGTTTATCTTCCGTTTTCTAACCACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGtt                                             <  2:1132827/140‑1 (MQ=255)
                                                                                                 agtctcATCTTTTACGTGGTTGTTGATCTTCCGTATGAAAACCAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGttt                                            <  1:1754014/138‑1 (MQ=255)
                                                                                                  ctctCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGtttt                                           >  2:717493/1‑140 (MQ=255)
                                                                                                     taatgttttAAGTGGTTTTTTATTGTCCGTTTGATAACAACGCGACTGTGAAAAATAATGCCTACACCCGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCt                                        <  1:925980/135‑1 (MQ=255)
                                                                                                     taaTCTTTGAAGTGGCTGTTGATCTACCGGATGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCt                                        <  1:2027815/138‑1 (MQ=255)
                                                                                                              ttttgtaTGTTGATCTTCCGGATTATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTg                               <  1:2046227/134‑1 (MQ=255)
                                                                                                              atgTGGTTTTTTATCTTCCGTATTAAACACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTg                               <  1:835928/138‑1 (MQ=255)
                                                                                                              acgTGGATGTTGACCTACCGGATTATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTg                               <  1:2019788/138‑1 (MQ=255)
                                                                                                               aGTGTATTTTCATCTGCCGGATTAAAACGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGa                              <  1:1492611/140‑1 (MQ=255)
                                                                                                               aGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGa                              >  2:2386568/1‑140 (MQ=255)
                                                                                                               aGTGGATGTTCAACTTCCGGATTAAAACGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGa                              <  1:601496/140‑1 (MQ=255)
                                                                                                                gTGGATGTTGATCTGCCGTATCATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATGGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAg                             <  1:2523862/140‑1 (MQ=255)
                                                                                                                   taTGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt                          <  2:1277018/139‑1 (MQ=255)
                                                                                                                   gtttttGATCTTCCGGTTTATACAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTAATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt                          <  2:423434/136‑1 (MQ=255)
                                                                                                                   gATGTTGATCTTCCGGATGATAAACCCGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt                          <  2:449614/140‑1 (MQ=255)
                                                                                                                    tttttGTTCTTCCGTATGAAAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgtg                         <  1:1023603/137‑1 (MQ=255)
                                                                                                                    ttGTTGATCTGCCGGATGAAACAGACGCGACTGTGAAAATTAATGCCTCCACCGGAAAGGGTGCAAACAGTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgtg                         <  1:1470495/139‑1 (MQ=255)
                                                                                                                    aTGTTGATGTTCCGGATGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgtg                         <  1:1606848/140‑1 (MQ=255)
                                                                                                                         gATTTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAAc                    <  1:203381/140‑1 (MQ=255)
                                                                                                                          aTCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACt                   >  1:500274/1‑140 (MQ=255)
                                                                                                                          aTCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACt                   >  1:2265034/1‑140 (MQ=255)
                                                                                                                             ttCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCt                                        <  1:1286208/116‑1 (MQ=255)
                                                                                                                             ttCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCt                                        >  2:1286208/1‑116 (MQ=255)
                                                                                                                             ttCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGac                >  2:101701/1‑139 (MQ=255)
                                                                                                                             ttCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGaa                <  1:836613/140‑1 (MQ=255)
                                                                                                                              tCCGGTTGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAAc               <  1:2027955/140‑1 (MQ=255)
                                                                                                                              tCCGGATCAAAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAAc               <  2:1107350/140‑1 (MQ=255)
                                                                                                                                   tttaaaaaGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATa          <  1:1456822/135‑1 (MQ=255)
                                                                                                                                   atgatAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATa          <  1:893789/140‑1 (MQ=255)
                                                                                                                                    tgatAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATac         >  1:969096/1‑140 (MQ=255)
                                                                                                                                       tAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATacaaa      >  1:1248234/1‑140 (MQ=255)
                                                                                                                                          cgaagAGACTGTGAAAATTCATTCCTACACCGGAACGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATacaaaaca   <  1:1945687/139‑1 (MQ=255)
                                                                                                                                          agacgCGACTGTGAAAATGAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATacaaaaca   <  1:95755/140‑1 (MQ=255)
                                                                                                                                           gaagCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATacaaaacaa  <  1:2128944/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                           
CAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATACAAAACAA  >  NZ_CP034943/1365977‑1366254

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: