Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP034943 | 1,366,115 | 0 | G | C | 36.5% | 134.3 / 32.2 | 101 | E205Q (GAA→CAA) ‡ | EO946_RS07135 | PepSY domain‑containing protein |
Reads supporting (aligned to +/- strand): ref base G (41/20); new base C (1/34); total (42/59) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.97e-11 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 108 total aligned reads displayed.
CAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATACAAAACAA > NZ_CP034943/1365977‑1366254 | caaAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAaaga > 2:2207101/1‑140 (MQ=255) caaAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAaaga > 2:1043772/1‑140 (MQ=255) caaAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCAGGATGATAaaga > 2:1414003/1‑140 (MQ=255) acCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTTATCTTCCGGATGATAAAGAAGCGACtg > 2:1961556/1‑140 (MQ=255) acCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACtt > 2:2029177/1‑139 (MQ=255) acCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACtg > 2:1195579/1‑140 (MQ=255) cGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGagtctg > 1:1644446/1‑135 (MQ=255) cGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACtgtg > 1:1644458/1‑140 (MQ=255) cGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACtgtg > 2:869095/1‑140 (MQ=255) gATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGa > 2:2340521/1‑140 (MQ=255) aaaaaCACGCAAACACCCTGGGTGAGCGAGAACCGGGGGGG‑ACAGCGTTTGCCGAATATCTCTAAAAAAGTGAGGGCACTCTAATGTTTGATGTGGTTTTTGATCTTCCGTTGTTTAAAGACGCGACTGTGAAAATTAAt < 2:1734771/140‑1 (MQ=255) accctttGCTGAGCTATAACGGGGGGGG‑ACAGCGGATGACGAATAACTCAAAAAATGTGAGGCAACTATAATATTTGATGTGTTTGTTTATCTTCCGGATGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGaa < 1:535610/135‑1 (MQ=255) acccATGGCTGAGCGATAAACGGGCGGT‑ACCGCGAATCACGAAGACATCCAAAAAAGTTAGGGCACTCTAATTTTTGAAGTGTTTTTTTATCTGCGGTTTTATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGaa < 2:1389529/138‑1 (MQ=255) aaCCTTTGCTGAGCTATAACCGGGCGGG‑ACAGCGTATTACGCAGATCTCTAAAAAAGTGAGGGCACTCTCATCTTTTATGTGTATGTTTATCTTCCGGATTATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGaa < 2:285701/140‑1 (MQ=255) ttGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGtt > 1:2523649/1‑140 (MQ=255) tGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTg > 1:971304/1‑140 (MQ=255) tGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTg > 2:203381/1‑140 (MQ=255) gtGAGCGACAACGGGGGGGG‑ACAGCGGATGACGCAGATCTCTAAAAATGTGAGGCCACTCTCATCTTTGATGGGTTTTTTGATGTTCCGTATTAAAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa < 1:954366/139‑1 (MQ=255) cTGAGCGAGACCGGGGGGGC‑ACCGGGGATGACGCAGATCTCTAAAAAAGTGAGCGCACTCTAATGTTTGATGTGTTTGTTTATCTTCCGGATGATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa < 1:2207101/140‑1 (MQ=255) cTGAGCGAGAACGGGGGGGT‑ACAGGGTATGACCCAGATCCCCAAAAAATTTAGGGAACTATAATTTTTTATGTGTTTTTTTATCTGCCGTTTCATAACCCCGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa < 1:2282527/140‑1 (MQ=255) cTGAGCGACAACGGGGCGGG‑ACCGCGGTTGACGCCTATCTCCAAAAAAGTGAGGGCACTCTAATCTTTGATGTGTATTTTGATCTTCGGTATTATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa < 1:2543334/140‑1 (MQ=255) cTGAGCGACAACCGGGGGGG‑ACCGCGGATGACGATCATCACCAAAAAAGTGAGGCCACTCTCATATTTGATTTGTTTTTTGATCTGCGGCATTATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa < 1:2241088/140‑1 (MQ=255) aGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAAc > 1:1902046/1‑140 (MQ=255) aGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAAc > 1:672968/1‑140 (MQ=255) aGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAAc > 2:2427420/1‑140 (MQ=255) gctataaaCGGGGGGG‑ACAGGGGATCACGCAGACATCAAAAAACGTTTGCGAACTCTCATCTTTTATGTGTTTGTTGATCTTCCGGTTTATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa < 1:2611946/135‑1 (MQ=255) gCGAGAACGGGGCGGC‑ACCGCGTATGACCCAGAACCCCAAAAACGGGAGGGCACTCTAATTTTTTAAGGGCATTTTGATTTTCCGGATCATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa < 1:1653927/140‑1 (MQ=255) ccGACAACCGGGGGGC‑ACCGCGGATCACCAAGAGCTCCAAAAAAGGTAGGCCACACAAATGTTTGAAGTGGTTGTTTATCTTCGGGGGGAACCCCAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa < 1:23761/139‑1 (MQ=255) gcgccaaCGGGGGGGCACCGCGCATCACGCAGATCTCTAAAAAAGTCCGCGCACTCTCATTTTTCACTGGGTTTTTGATGTTCGGTATTATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa < 1:1381180/135‑1 (MQ=255) cgacacccggggggg‑ACAGCGTCTGCCGCAGATCTCAAAAAACGTGCGGCCACTCTCATCTTTGACGTGGATGTTCATCTTCGGGTTTATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt < 2:2391719/133‑1 (MQ=255) cgacacccggggggg‑ACAGCGGATGCCGCATATCCCCAAAAAAGTGAGGCCACTCTAATATTTTACGGGGTTGTTGATCTCCCGGTTGATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt < 1:2058016/133‑1 (MQ=255) ccacaaccgggcggg‑ACCGGGGATGACGAAGACCTCTAAAAATGTGAGGCCACTCTAATCTTTTAAGTGGTTTTTGATCTTCCGGATCATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt < 1:169790/133‑1 (MQ=255) cGATAACCGGGCGGG‑ACAGCGTATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATTATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt < 2:2372205/140‑1 (MQ=255) cGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt > 1:2100332/1‑140 (MQ=255) cGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt > 1:976547/1‑140 (MQ=255) cGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt > 1:2710787/1‑140 (MQ=255) cGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt > 1:1467333/1‑140 (MQ=255) cGACAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCTAAAAACTTGAGGGCACTCTCATCTTTGAAGTGTATGTTGATCTTCCGGATTATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt < 2:2141890/140‑1 (MQ=255) cgaACCGGGCGGG‑AAAGCGGTTCACCCAGAACTCCAAAAAAGGGAGGCCACTAACATCTTTTAAGTGTATGTTGATCTTCCGGATGATAAAAACGCGACTGTGAAAATTAAGGCCTACACCGGAAAGGTTGCAAACAGtg < 2:1238685/139‑1 (MQ=255) agaCACGGGGGGG‑ACCGCGGATCCCGCACAGCGCTAAATAAGTGAGGGCAATCTCATCTTTTAAGTGTATGTTGATGTTCCGGATGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAGtg < 2:765028/140‑1 (MQ=255) agaACCGGGCGGG‑ACAGCGGATGACGCAGATCTCCAAAAATGTGAGGGCACTCTCATCTTTTATGTGGATGTTGATCTTCCGGATTATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATtg < 2:1729916/140‑1 (MQ=255) acacccgggcggc‑ACCGCGTATGACCCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGATGTGGTTGTTGATCTGCGGGTTGATAAACCCGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATtg < 1:251869/135‑1 (MQ=255) gaAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATtgt > 1:1878518/1‑140 (MQ=255) ggggcggg‑ACCGGGGTTGACGAATTTCTCTAAAAAATTGAGGGAACACTAATCTTTGAAGTGGATTTTTATATACCGGATGAAAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGCTTGCAAACATTGTGTAt < 1:424935/139‑1 (MQ=255) cgggcggg‑AACGGGTATGACGCACATCACTAAAAAAGTTAGGGCAGAATCATCTTTTAATTGTTTGTTTATCTTCCGGTTGAAAACTCCGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTAt < 2:2355729/140‑1 (MQ=255) gggggg‑ACCGCGTATGACGAAGATCTCTAAAAAAGTGAGGGCACTCTCATCTTTTAAGTGGTTGTTGATCTTCCGGATTATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGa < 2:2246708/137‑1 (MQ=255) ggcggg‑CCAGCGGATGACGCAGATCTCGAAAAAAGTGCGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAACCACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGa < 2:64701/140‑1 (MQ=255) ggcggg‑ACAGCGGATCCCGCAGAGCTCGAAAAAAGTGAGGGCACTCTAATCTTTGAAGTGGATGTTGATCTCCCGGATTATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGa < 2:835468/140‑1 (MQ=255) gcggg‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGAACTCTCATCTTTGAACTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACAGGAAATGATGCAAACATTGTGTATCAg > 1:704992/1‑140 (MQ=255) ggg‑ACCGCGGATGACGCAGCTCTCTAAAAAAGTCAGGGCACTCTCATCTTTCAAGTGTATGTTTATCTTCCGGATGATAACGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGa < 2:891520/140‑1 (MQ=255) ggg‑ACCGCGGATGACGCAGATCTCGAAAATAGTGAGCGCACTCTCATCTTTGAAGTGGATGTTGATGTTCCGGATGATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGa < 2:1439641/140‑1 (MQ=255) ggg‑ACAGGGGATGACGCACATCTCTAAAAAAGGGAGGCCACTCAAATATTTGACGTGGATGTTGATCTGCGGTATCATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGa < 1:2054117/140‑1 (MQ=255) cGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACgg > 2:2527642/1‑140 (MQ=255) tcaCGCAGAGCTCGAAAAAAGTGAGGGCACTCTCATATTTGATGTGGATGTTGATCTTCCGGATTATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAACGGTTGCAAACATTGTGTATGAGGACTGACGGGTtc < 2:733838/138‑1 (MQ=255) gACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTtct > 2:836613/1‑140 (MQ=255) gACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTtct > 2:1677823/1‑140 (MQ=255) cGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCtca > 2:1554234/1‑140 (MQ=255) aGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCtcatca > 2:1177669/1‑140 (MQ=255) aTCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCaaa > 2:795047/1‑140 (MQ=255) aTCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCaaa > 2:876492/1‑140 (MQ=255) aTCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCaaa > 2:170801/1‑140 (MQ=255) aTCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCaaa > 2:1659780/1‑140 (MQ=255) gAAAAAAGTGAGGGCACTCTCATCTTTGACGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATtctc > 2:1787963/1‑140 (MQ=255) gAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTTTGAGGACTGACGGGTTCTCATCAAATtctc > 2:1787907/1‑140 (MQ=255) gTGAGGGCACTCTCATGTTTCCCGTGGGTGTGGAGCGTCCGGATGATCAACAAGGGCATGGGGACATTAATGCCTACACCCGCCCGGGGGCCACCCTTGTGGCGGAGGACTGACGGGTTCTCAGCAAAGTCTCATCGTtc > 2:1031805/1‑140 (MQ=255) cACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGtt < 1:1661227/140‑1 (MQ=255) cACTCTAATCTTTTATGTGGATGTTTATCTTCCGTTTTCTAACCACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGtt < 2:1132827/140‑1 (MQ=255) agtctcATCTTTTACGTGGTTGTTGATCTTCCGTATGAAAACCAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGttt < 1:1754014/138‑1 (MQ=255) ctctCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGtttt > 2:717493/1‑140 (MQ=255) taatgttttAAGTGGTTTTTTATTGTCCGTTTGATAACAACGCGACTGTGAAAAATAATGCCTACACCCGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCt < 1:925980/135‑1 (MQ=255) taaTCTTTGAAGTGGCTGTTGATCTACCGGATGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCt < 1:2027815/138‑1 (MQ=255) ttttgtaTGTTGATCTTCCGGATTATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTg < 1:2046227/134‑1 (MQ=255) atgTGGTTTTTTATCTTCCGTATTAAACACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTg < 1:835928/138‑1 (MQ=255) acgTGGATGTTGACCTACCGGATTATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTg < 1:2019788/138‑1 (MQ=255) aGTGTATTTTCATCTGCCGGATTAAAACGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGa < 1:1492611/140‑1 (MQ=255) aGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGa > 2:2386568/1‑140 (MQ=255) aGTGGATGTTCAACTTCCGGATTAAAACGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGa < 1:601496/140‑1 (MQ=255) gTGGATGTTGATCTGCCGTATCATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATGGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAg < 1:2523862/140‑1 (MQ=255) taTGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt < 2:1277018/139‑1 (MQ=255) gtttttGATCTTCCGGTTTATACAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTAATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt < 2:423434/136‑1 (MQ=255) gATGTTGATCTTCCGGATGATAAACCCGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt < 2:449614/140‑1 (MQ=255) tttttGTTCTTCCGTATGAAAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgtg < 1:1023603/137‑1 (MQ=255) ttGTTGATCTGCCGGATGAAACAGACGCGACTGTGAAAATTAATGCCTCCACCGGAAAGGGTGCAAACAGTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgtg < 1:1470495/139‑1 (MQ=255) aTGTTGATGTTCCGGATGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgtg < 1:1606848/140‑1 (MQ=255) gATTTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAAc < 1:203381/140‑1 (MQ=255) aTCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACt > 1:500274/1‑140 (MQ=255) aTCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACt > 1:2265034/1‑140 (MQ=255) ttCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCt < 1:1286208/116‑1 (MQ=255) ttCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCt > 2:1286208/1‑116 (MQ=255) ttCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGac > 2:101701/1‑139 (MQ=255) ttCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGaa < 1:836613/140‑1 (MQ=255) tCCGGTTGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAAc < 1:2027955/140‑1 (MQ=255) tCCGGATCAAAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAAc < 2:1107350/140‑1 (MQ=255) tttaaaaaGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATa < 1:1456822/135‑1 (MQ=255) atgatAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATa < 1:893789/140‑1 (MQ=255) tgatAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATac > 1:969096/1‑140 (MQ=255) tAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATacaaa > 1:1248234/1‑140 (MQ=255) cgaagAGACTGTGAAAATTCATTCCTACACCGGAACGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATacaaaaca < 1:1945687/139‑1 (MQ=255) agacgCGACTGTGAAAATGAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATacaaaaca < 1:95755/140‑1 (MQ=255) gaagCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATacaaaacaa < 1:2128944/140‑1 (MQ=255) | CAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGG‑ACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATACAAAACAA > NZ_CP034943/1365977‑1366254 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |