Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0349431,730,0960GC28.0% 131.9 / 12.1 75E173Q (GAA→CAA) rodZcell shape determination protein RodZ
Reads supporting (aligned to +/- strand):  ref base G (33/21);  new base C (0/21);  total (33/42)
Fisher's exact test for biased strand distribution p-value = 2.67e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

CTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAGTTCTTGGATTCGAGTACGCGATGAA  >  NZ_CP034943/1729959‑1730233
                                                                                                                                         |                                                                                                                                         
cTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAgaagaa                                                                                                                                         >  1:579784/1‑140 (MQ=255)
cTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAgaagaa                                                                                                                                         >  2:1617098/1‑140 (MQ=255)
     aaataaatTACGCAAAGTGAAAGCAATTACGAAATCCCAAACCATTAAAAGATAAAAGAGAAACAAAGCAACAGATATTAAAAAGAGGCATACACTAAAAAAGAAACGAAACAAAAAGAAGATAAAAAAGAAGAAAGCGa                                                                                                                                    <  2:652410/140‑1 (MQ=255)
       agcAATTACGCAAAGTGAGAGCAAGTACGAAATACCAAAAGATTCAACGCAGAAAGAGAAACAAAATAACAGCTCTGAAAAAGAGACAGACACTAAAAAAGAAACGAAATAAAACGAAGAGAAGAAAAAAGAAAATGACa                                                                                                                                  >  2:978250/3‑140 (MQ=255)
            ttaccaaaaGTTAAAGCAATTACTAAATCCAAAAAGATTCAACGCTAAAAGAGAATAAAAGAAACAGCTCTTAAAAAGAGGCAGACAATAAAAAAGAAACGAAACAAAAATAACATAAAAAAGAAGAAAGCGACAGTGAt                                                                                                                             <  2:1751729/134‑1 (MQ=255)
                  aatgTGAAAGCAAGTACTAAATCCAAAAAGATTCAACCCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACAATAAAAAAGAAACCAAACAAACAGAAGATAAAAAACAACAACGCGACAGTGATAAACTg                                                                                                                       <  2:704877/137‑1 (MQ=255)
                  aaaGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTg                                                                                                                       >  2:1317169/1‑140 (MQ=255)
                    aGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGga                                                                                                                     >  2:1406925/1‑140 (MQ=255)
                          aGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTaa                                                                                                               >  2:236825/1‑140 (MQ=255)
                          aGCAAGTACGAAATCCCAAAAGATTCAAAGCTAAAAGAGAATCAAATCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCTACAGTGATAAACTGGAGATTaa                                                                                                               >  2:236826/1‑140 (MQ=255)
                           gCAATTACTAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGAAACAGCTCTGAAAAAGAGGCAGACACTAAAAAATAAACGAAAGAAAAAGAAGATAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTaaa                                                                                                              <  2:1788295/140‑1 (MQ=255)
                           gCAAGTACGAAATCCAAAAAGATTCAACGCTAAAATAGAATAAAACCAACAGCTCTGAAAAAGAGGCACACAATAAAAAAGAAACGAAACAAAAAGAACATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTaaa                                                                                                              <  2:388796/140‑1 (MQ=255)
                               ctACGAAACCCAAACACATTAAACGCTAAAAGAGAATCAAAGCAACCGCTCTGAAACAGCGGCACACACTAAAAAAGAAACGAACCAAACCCAACATAAAACCGACCAACGCGACAGTGATACACTGGAGATTAAAGCaa                                                                                                          <  2:35965/139‑1 (MQ=255)
                               ctACGAAAACCACAAACATACACCGCTACAACAGAATCAAAGCACCAGCTCTGAAAAAGAGGCACACACTAAAACAGAAAGGAAAGAAAAAGAATATAAAAAAGACCAAAGCGACAGTGATAAACTGGAGATTAAAGCaa                                                                                                          <  2:1607745/139‑1 (MQ=255)
                                tACTAAATCCCAAACGATACAACGCTAAAAGATAATAAAACAAACAGCTATAAAAAAGAGGAACACAATAAAAAACAAACGAAAAAAAAACAACAAAAAAAACAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                                         <  1:2540352/140‑1 (MQ=255)
                                tACTAAATCCCAAAATATTAAACGATAAAACATAAAAAACGCAACAGCTCTTAAAAAGAGGAACACAATAAAAAAGAAACCAACGAAAAACAAGATAAAAAAGAAGAAAGCGACCGTGATAAACTGGAGATTAAAGCAAc                                                                                                         <  2:227550/140‑1 (MQ=255)
                                tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                                         >  2:2105411/1‑140 (MQ=255)
                                tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                                         >  2:1288760/1‑140 (MQ=255)
                                tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                                         >  1:539742/1‑140 (MQ=255)
                                tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACAAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                                         >  1:1031834/1‑140 (MQ=255)
                                tACCAAATCAAAAAAGATACAACCCTAAAACAAAATAAAACAAACAGCTATGAAAAAGCGCAACACAAAAAAAAACAAACCAAACAAAAACAACAAAAAAAACACCAACGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                                         <  1:1662683/140‑1 (MQ=255)
                                  cGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTg                                                                                                       >  1:1861329/1‑140 (MQ=255)
                                  agAAATCCCAAAAGATTCAACGATAAAAGATAATCAAAGCAACAGCTCTGAAAAAGAGGCACACACTAAAAAAGAAACGAAATAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTg                                                                                                       <  2:1897137/139‑1 (MQ=255)
                                   taaaTCCCAAAATATTCAACTATAAAAGACAAACAACGCAACCGATCTGAAAAAGAGGCACACACAAAAAAACAAACCAAACAAAAACAAGATAAAAAACAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTgg                                                                                                      <  1:2707354/139‑1 (MQ=255)
                                     aacacaaaaaTATTAAACCATAAAAAACAATAAAACCAAAAGATCTCAAAAACAGGCACACAAAAAAAAACAACCCAAACAAAAACAACATAAAAAACACCAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCa                                                                                                    <  1:2105411/134‑1 (MQ=255)
                                       tCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCTACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGAGACAGTGATAAACTGGCGATTAAAGCAACTGGCACt                                                                                                  >  2:1978330/1‑140 (MQ=255)
                                       tCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACt                                                                                                  >  1:577804/1‑140 (MQ=255)
                                       tCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACt                                                                                                  >  2:2431558/1‑140 (MQ=255)
                                         ccAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGa                                                                                                >  2:897006/1‑140 (MQ=255)
                                         ccAAAAGATTAAACGCTAAAATAGAATCAAAGCAACAGCTCTGAAAAACAGGCAGACACTAAAAAATAAACTAAAGAAAAACAAGATAAAAAAGAAGACAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGa                                                                                                <  2:2448919/140‑1 (MQ=255)
                                         ccAAAAGATTAAACGATAAAACAGAATAAAAGCAACAGCTCTGAAAAAGAGGCACACACTAAAAAAGAAACGAAACAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGa                                                                                                <  2:1034026/140‑1 (MQ=255)
                                         caaaaaTATTAAACCCTAAAATATAATAAAAGCAACCGATCTTAAAAAGAGTCAGACAATAAAAAAGAAACAAAAGAAAAAGAACATAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGa                                                                                                <  2:1031834/138‑1 (MQ=255)
                                          aaaaaGATTAAACGATAAAATATAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAACAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGaa                                                                                               <  2:1861329/139‑1 (MQ=255)
                                             aaGATTAAACGATAAAAGAGAATAAAAGCAACAGCTCTTAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAggg                                                                                            <  2:579784/140‑1 (MQ=255)
                                                  tCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCAtt                                                                                       >  1:62409/1‑140 (MQ=255)
                                                     ccGCTAAAACACACTCAAAGCAACCGCTCTGAAAAACAGCCACACACTAAAAAAGAAACGAAACAAAACCAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                                    <  2:1502730/139‑1 (MQ=255)
                                                     acccTAAACGAGAATCAAACCAACACCTATCAAAAACAGCCATACACTAAAAAACAAACCAAATAAAAAGACCGTAAAAAAGACGAACGCCACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                                    <  1:513595/137‑1 (MQ=255)
                                                     accatAAAATACAATAAAAGAACCCTCTCTCAAAAAGAGCCAGACAATAAAAAACAAACGAAATAAAAAGAACAAAAAAACCAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                                    <  1:1359094/136‑1 (MQ=255)
                                                     aatatAAAAGAGAATCAAAGCAACAGCTCTGAAAAACAGGCAGAAACTAAAAAACAAACGAAACAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                                    <  2:719253/136‑1 (MQ=255)
                                                     aCGCTAAACCACAATAAACCCACCCGCTCTCAAAAAGAGGCAGACAATAAAAAAGAAACGAAAGAAAAAGAAGATAAAAACCAAGACAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                                    <  2:999062/140‑1 (MQ=255)
                                                     aCGCTAAAAGATAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAACAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                                    <  2:557263/140‑1 (MQ=255)
                                                     aCGCTAAAAGACAATCAAACCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAACAAACGAAACAAAAACAAGATAAAAACGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                                    <  2:124634/140‑1 (MQ=255)
                                                     aCGCAAAAACACAATAAAACAAACAGCTCTTAAAAAGAGCAACAAAAAAAAAAACAAACCAAACAAAAACAACAAAAAAAACAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                                    <  1:212741/140‑1 (MQ=255)
                                                          aaaaGATAAAAAAACAAACAGCTCTTAAAAAGAGGCACACAATAAAAAACAAACGAAACAAAAACAACACAAAAACCACCAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACtt                                                                               <  1:673405/140‑1 (MQ=255)
                                                               ataaTAAAAGCAACCGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACCAAATAAAAAGACGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGaa                                                                          <  2:539742/138‑1 (MQ=255)
                                                               agaATCAAAGCAACAGCTCTGAACAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGACGAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGaa                                                                          <  2:2528641/140‑1 (MQ=255)
                                                               acactCACAGCAACAGCTCTGAAAAAGAGGCATACACTAAAAAAGAAACGAAAGAAAAAGACGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGaa                                                                          <  2:1873449/136‑1 (MQ=255)
                                                                 aaTCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                                    >  1:2654187/1‑128 (MQ=255)
                                                                 aaTCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                                    <  2:2654187/128‑1 (MQ=255)
                                                                 aaTCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgt                                                                        >  1:1023222/1‑140 (MQ=255)
                                                                 aaTCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGGGATACAATGGAGATTAAAGCACCTGGCACTGAAGGGTCATTAAGGACTTATGacgc                                                                        >  1:1502730/1‑137 (MQ=255)
                                                                   tCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCACCTGGCACTGAAGGGTCATTAACGACTTATGAAgctg                                                                      >  1:719253/1‑137 (MQ=255)
                                                                            cAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATGAAAGACATATGAAGTGTCCGGCGCTg                                                             >  2:2365451/1‑140 (MQ=255)
                                                                              gCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGATAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCACCTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTgag                                                           >  1:1841830/1‑140 (MQ=255)
                                                                              gCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATTAAGTGTCCGGCGCTgag                                                           >  1:1117375/1‑140 (MQ=255)
                                                                              gCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTgag                                                           >  1:1117186/1‑140 (MQ=255)
                                                                                     aaaaGAGGCAGACAATAAAAAAAAAACGAAAGAAAAAAAACAAAAAAAATAACAACCCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCg                                                    <  1:2704692/140‑1 (MQ=255)
                                                                                     aaaaCAGGCACAAACTAAAAAACAAACCAAACAAAAACAATATAAAAAACAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCg                                                    <  1:2431558/140‑1 (MQ=255)
                                                                                         gagGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACCGTGATAAACTGGAGATTAAAGCACCTGGCACTGACGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGACATTCGAGCt                                                >  1:79994/1‑140 (MQ=255)
                                                                                         gagGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCt                                                >  1:77466/1‑140 (MQ=255)
                                                                                         cagGCAGACACTAAAAAAGAAACTAAAGAAAAAGAAGATAAAAAAGAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCt                                                <  2:109407/139‑1 (MQ=255)
                                                                                              aGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAAc                                           >  1:1314639/1‑140 (MQ=255)
                                                                                                 cacTAAAAAAGAAACTAAACAAAAATAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                                        <  2:2228191/140‑1 (MQ=255)
                                                                                                 aacTAAAAAACAAACGAAACAAAAACAACATAAAAAACAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                                        <  1:2010876/139‑1 (MQ=255)
                                                                                                 aaatAAAAAATAAACGAAACAAAAAGAATATAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                                        <  2:2384717/137‑1 (MQ=255)
                                                                                                      aaaaaTAAACTAAAGAAAAACAAGATAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCa                                   <  1:2533264/140‑1 (MQ=255)
                                                                                                      aaaaaGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCa                                   >  1:1598050/1‑140 (MQ=255)
                                                                                                      aaaaaGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCa                                   >  1:1928508/1‑140 (MQ=255)
                                                                                                            aaaCGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATAAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGAc                             >  2:1911111/1‑140 (MQ=255)
                                                                                                             aaCCAAAGAAAACCCCGATAAACCACACGAAACCGACAGTGATAACCTGGAGAATAAAGCAACTGGCACTGACGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGCACTGAAGGCATCAGACa                            <  2:269545/140‑1 (MQ=255)
                                                                                                              aCGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAg                           >  2:1790951/1‑140 (MQ=255)
                                                                                                              aCGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGAAAGTGATAAACAGGAGATTAAAGCAAATGACACAGAAGGGTCAATAAAGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACACAATGCATCAGACAg                           >  2:2018928/1‑140 (MQ=255)
                                                                                                                gaaagaaaAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAGtt                         >  2:439520/1‑140 (MQ=255)
                                                                                                                gaaagaaaAAGAAGATAAAAAAGAAGAAAGAGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAATGGTCATTAACTACTTATGAAGTGTCAGGCGCTGAGAAATTCGAGCTCGAACTGAATGAATCATACAGtt                         >  2:957641/1‑140 (MQ=255)
                                                                                                                       aacgaagaTAAAAAACAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAGTTCTTGGAt                  <  2:1737297/137‑1 (MQ=255)
                                                                                                                       aaacaaCATAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAGTTCTTGGAt                  <  2:1765762/140‑1 (MQ=255)
                                                                                                                               tAAAAAAGATGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAGTTCTTGGATTCGAGTAc          <  2:1209318/140‑1 (MQ=255)
                                                                                                                                     agaagaAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAAATGAATTCATCAGACAGTTCTTGGATTCGAGTACGCGATg    >  2:1562478/1‑140 (MQ=255)
                                                                                                                                       aagaaAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAGTTCTTGGATTCGAGTACGCGATGaa  <  2:1928508/140‑1 (MQ=255)
                                                                                                                                       aagaaAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAGTTCTTGGATTCGAGTACGCGATGaa  >  2:540280/1‑140 (MQ=255)
                                                                                                                                       aagaaAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAGTTCTTGGATTCGAGTACGCGATGaa  >  2:540255/1‑140 (MQ=255)
                                                                                                                                       aagaaAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAGTTCTTGGATTCGAGTACGCGATGaa  <  2:1598050/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                         
CTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAGTTCTTGGATTCGAGTACGCGATGAA  >  NZ_CP034943/1729959‑1730233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑