BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	607566 =	157 (0.840)	9 (0.050) +CGCTCCGGT	4/252	9.2	6.0%	coding (409/1125 nt)	EO946_RS03185	collagen‑like protein
*	?	NZ_CP034943	= 607637	147 (0.780)	9 (0.050) +CGCTCCGGT	4/252	9.2	6.0%	coding (480/1125 nt)	EO946_RS03185	collagen‑like protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 157 total aligned reads displayed.

GCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAG  >  NZ_CP034943/607428‑607701

gcgacaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCAc                                                                                                                                        <  1:470253/140‑1 (MQ=255)

gccacaggagcAACCGGGGAAGCCGCACCACCCGCAGCGACAGGAGCGACAGGAGCGACAGGCCCTCCCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCAc                                                                                                                                        <  1:1134176/137‑1 (MQ=18)

 cgacaggcgcCCCCGGGGAACCCGGACCAGCCGGAGCGCCAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACg                                                                                                                                       <  2:2085397/140‑1 (MQ=18)

   ccacgcgcTACCGCGGAAGCCGGACCCCCCGGAGCGACAGGCGCGACAGGAGCGACAGGAGCTACCGGGGCAGCTGGTGCAGCTGCCGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg                                                                                                                                     <  2:1122378/134‑1 (MQ=18)

   acaggagcTACCGGGGCAGCCGGACCAGCCGGACCGCCAGGAGCGACAGGAGCCACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg                                                                                                                                     <  1:675742/140‑1 (MQ=255)

   acaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg                                                                                                                                     <  2:43497/140‑1 (MQ=255)

   acaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg                                                                                                                                     <  1:1579824/140‑1 (MQ=255)

     cggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGTGCTACCGGGGAAGGTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAg                                                                                                                                   <  2:1847095/139‑1 (MQ=255)

      ggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGc                                                                                                                                  >  1:1965971/1‑140 (MQ=255)

         gcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcac                                                                                                                               <  2:2335259/140‑1 (MQ=255)

         ccgaCCGGGGCAGCCGGACCACCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTCCCGGGTAAGGTGGACCAGCTGGAGCGACGGGCGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcac                                                                                                                               <  1:156034/137‑1 (MQ=21)

          ctccgggggAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcaca                                                                                                                              <  1:429934/135‑1 (MQ=255)

          cgcccGGGGAAGCCGGACCACCCGGAGCGCCCGGAGCGACCGGAGCCCCAGGAGCTCCCGGGGCAGCTGGACCAGCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcaca                                                                                                                              <  2:200912/137‑1 (MQ=17)

          cTACCGGGGAAGCCGGACCAGCCGGATCGACTCGAGCGACTGTAGCGACAGGAGCTACCGTCGCAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCGGTGCCACGGGAGCcaca                                                                                                                              <  2:1680244/140‑1 (MQ=18)

          cTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcaca                                                                                                                              <  1:487268/140‑1 (MQ=255)

            ccgggggCAGCCGGACCAGCCGTAGCGACAGGAGCGACTGGAGCCCCCTGAGCTACCGGGGAAGCTGGACCAGCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg                                                                                                                            <  2:423147/137‑1 (MQ=17)

            aCCGGGGCAGCCGGACCAGCCGGAGCTCCAGGAGCGACAGGAGCTACAGGAGCTACCGGGGAAGCAGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg                                                                                                                            <  2:2518711/140‑1 (MQ=18)

            aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg                                                                                                                            <  1:713484/140‑1 (MQ=255)

            aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg                                                                                                                            <  1:2854790/140‑1 (MQ=255)

                 ggAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg                                                                                                                            <  2:2123138/135‑1 (MQ=255)

                 ggAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg                                                                                                                            >  1:2123138/1‑135 (MQ=255)

                  gAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGCGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGGGCCACGGGAGCGACAGGGGGTag                                                                                                                      >  2:1805346/1‑139 (MQ=255)

                  gAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACCGGGGCTAc                                                                                                                      >  2:1452333/1‑140 (MQ=255)

                          aCCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAg                                                                                                              >  1:1725510/1‑140 (MQ=255)

                          aCCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCGGGACCAACTGGAGCGACGGGAGCCACAGGAGCTACCGGGGAAGACGGACCAGCCGGGGCCACGGGAGCACCACTGGCTCCTCGGGacg                                                                                                              >  1:868834/1‑138 (MQ=18)

                               ccggagcgaccggagcgaCAGGCGCTACCGGCGCTCCCGGCGAAGCTGGACCCGCTGGAGCGACGGGAGCGACAGGTGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGa                                                                                                         <  2:2826265/140‑1 (MQ=21)

                               ccGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCGGGCGGGGCCACGGGAGCCACAGGGGCTGCGGGGGTAGCCggg                                                                                                         >  2:1431584/1‑139 (MQ=21)

                               ccGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGa                                                                                                         >  2:478078/1‑140 (MQ=255)

                               ccGGAGCGACAGGAGCGACAGGAGCCACAGGACCAACCGGCGAAGCTGGAACAGATGGAGCGACGGGAGCTCCCGCAGATACAGGTCAAGCATGACAAGACAGGGCCACCGGAGCCACAGGGGCAACTGGGGAAGACGGa                                                                                                         >  1:2226131/1‑140 (MQ=16)

                               ccGGAGAGAGAGGAGCGACCGGTGAGACTGGATATACCGGCGTAGCTGGTCCAGCCGGAGCGACGGGAGCGACTGGTGCTACGGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGa                                                                                                         <  2:2398137/140‑1 (MQ=18)

                               ccGGACCGACAGGAGCGACAGGAGCGACAGGAGCTCCCGGCGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGa                                                                                                         <  2:2397400/140‑1 (MQ=255)

                               caggagcgacaggagctccaggagctacaGGAGCTCCAGGTCCAGCTGGACGTCCTGGAGCCACGGGAGCGCCAGGAGCTACCGGGGAAGCCGGACCCGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGa                                                                                                         <  2:83364/138‑1 (MQ=18)

                                    gcgccaggcgcgacaggagcgaccggaGCTCCCGGGGCAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGc                                                                                                    <  1:1024999/140‑1 (MQ=21)

                                    gcgacaggagcgacaggagcgacaggaGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGc                                                                                                    <  1:978155/140‑1 (MQ=255)

                                       acaggagcgacaggagcgacaggagcTTCCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACTGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCgg                                                                                                 <  1:2663367/140‑1 (MQ=255)

                                       acaggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTCCGGGGGACGCCGGACCAGCCgg                                                                                                 >  2:594011/1‑140 (MQ=255)

                                       acaggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGTGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCgg                                                                                                 <  1:2703863/140‑1 (MQ=255)

                                       acaggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGGGCGACGGGAGCCACAGGGGCTCCTGGGGCCGGCGGAGCAGCCgg                                                                                                 >  2:2077590/1‑140 (MQ=18)

                                        ccggagcgacgggagccacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCAc                                                                                                                                        <  1:825834/98‑1 (MQ=255)

                                        ccggagcgacgggagccacaggagcTACCGGGGAAGCTGGACCAGCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCAc                                                                                                                                        >  2:825834/3‑100 (MQ=11)

                                           gagcgaccggagcgacaggagcTCCCGGGGAAGCTGTACCAGCTGGAGCGACGGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCg                                                                                             <  2:2682351/140‑1 (MQ=255)

                                            agcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACAGGGGAAGCAGGACCAGCCGGTGCCACGGGAGCGACAGGGGCTACTGTGGAAGCCGGACCAGCCGCAGCGa                                                                                            >  1:1849788/1‑140 (MQ=21)

                                             gcgaccggagcgccaggagcTTCCGGGGCAGCTGGACCCGCTGGAGCGACGGGAGCGACAGGAGCTCCCGGTGAAGCCGGACCAGCCGGCGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                           <  2:2491948/140‑1 (MQ=21)

                                             gcgacaggagcgacaggcgcTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                           <  1:2240871/140‑1 (MQ=255)

                                             gccccgcgagcgacccgagcTACCGCGTCTGCAGGCCCAGCTGGAGCGACGTGAGCGACAGGAGCACCCGGGGCAGCCGGACCAGCCGGGGCCACGGGAGCCACTGGGGATACTGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                           <  2:1712619/133‑1 (MQ=18)

                                                acaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACCGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCgcccgg                                                                                        >  2:2174232/1‑135 (MQ=255)

                                                  aggagcgacaggagcgacCGGCGCAGCCGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAg                                                                                      <  1:1650132/140‑1 (MQ=255)

                                                  agccccgacaggagcGACCGGGGCACGTGGACCAGCCGCCCCGACGGGAGCTACAGGCGCTTCGGGTGCAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAg                                                                                      <  1:2312611/135‑1 (MQ=18)

                                                      gcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTAc                                                                                  >  1:2447784/1‑140 (MQ=255)

                                                         tcaggagcTACCGGGGACGCGGGACCAGCTGGAGCGTCGGGCGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGATACTGGGGAAGCCGGACCCGCCGGAGCGACAGGAGCTACCgg                                                                               <  2:684445/139‑1 (MQ=21)

                                                         acaggagcTCCCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgg                                                                               <  2:684342/140‑1 (MQ=255)

                                                          caggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg                                                                              <  2:1851624/140‑1 (MQ=255)

                                                            gcagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCAACTGGCGAAGCCGGACCAGCAGGAGCGACAGGAGCTACCGGGGa                                                                            >  1:2864055/3‑140 (MQ=255)

                                                                cTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACCGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGcc                                                                        >  1:2579501/1‑140 (MQ=255)

                                                                  aCCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCCCGGGAGCAACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGAGTGGAGCTAACGGGGAAGCggg                                                                      >  1:58934/1‑140 (MQ=21)

                                                                  aCCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGAc                                                                                                        >  2:1557773/1‑106 (MQ=255)

                                                                  aCCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACGGGGGAAAGCGGACCAGCCGGAGCCACAGGAGCTACCGGGGAAGCCgg                                                                      >  2:1775702/1‑140 (MQ=255)

                                                                    cGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCCACGGGAGCCACAGGGGCTACTGGGGCAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                    >  2:1209648/1‑140 (MQ=255)

                                                                    cGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGCGAAGCAGGACCAGCCGGGGCCACGGGAGCCACAGGGGCAACAGGGGCAGGCGGACCAGCCGGAGCGACCGGACCTACAGGGGCAGCCGGAc                                                                    >  2:2413190/1‑140 (MQ=18)

                                                                       ggAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAg                                                                 >  1:1147482/1‑140 (MQ=255)

                                                                        gAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCCGCCGGGGCCACGGGAGCCACAGGGGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGc                                                                >  1:2452627/1‑140 (MQ=255)

                                                                        gAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCaac                                                                <  1:1557560/140‑3 (MQ=255)

                                                                        gAAGCTGGACCAGCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCaac                                                                >  2:1557560/1‑138 (MQ=255)

                                                                           gCTGGACCAGCTGGAGCGACGGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                                             <  1:2808843/140‑1 (MQ=255)

                                                                           gCTGGACCAGCTGGAGCCACGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACCGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                                             <  1:831633/140‑1 (MQ=255)

                                                                             tGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCATCCGGGGCGACGGGAGCCACAGGGGCTACTGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAg                                                           >  1:1128561/1‑140 (MQ=255)

                                                                                 ccAGCTGGAGCGCCGGGACCGACAGGAGCTACCGGGGAAGCGGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                       <  1:1440757/140‑1 (MQ=255)

                                                                                 ccAGCCGGAGCGACGGGCGCGACCGGAGCTACCGGGGAAGCCGCACCCGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                       <  1:540643/140‑1 (MQ=17)

                                                                                    gCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                    >  2:479679/1‑140 (MQ=255)

                                                                                     cTGGAGCGACGGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGCGCCACGGGAGCCACAGGGGCTACTGGGGAAGACGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGa                                                   >  1:1504400/1‑140 (MQ=255)

                                                                                      tGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAg                                                  <  1:1230265/140‑1 (MQ=255)

                                                                                         cgCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                               <  1:1355953/139‑1 (MQ=255)

                                                                                         cgCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                               <  1:1185030/139‑1 (MQ=255)

                                                                                         aGCGACGGGAGCCACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACGGGAGCGACAGGGGCTACGGGGGACGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGACGCCGGACCACCCGGAGCGCCAGgcgcgg                                               >  2:2193365/1‑138 (MQ=11)

                                                                                             aCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg                                                                                                                            >  1:1952963/1‑59 (MQ=255)

                                                                                             aCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg                                                                                                                            <  2:1952963/59‑1 (MQ=255)

                                                                                             aCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGACGGCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCCACggg                                           >  2:559003/1‑140 (MQ=255)

                                                                                              cGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg                                          <  1:1452333/140‑1 (MQ=255)

                                                                                              cGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg                                          <  1:2169431/140‑1 (MQ=255)

                                                                                              cGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGCCTACTGGCGAAGCCTGAACAGCCGGAGCGACAGGAGCTACCGGGTAAGCCGGAACAGCCGGAGCGACAGGAGATCCCggg                                          >  1:26259/1‑140 (MQ=17)

                                                                                               gggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                                                   >  2:1932128/1‑98 (MQ=255)

                                                                                               gggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                                                   <  1:1932128/98‑1 (MQ=255)

                                                                                               gggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCTGCCGCAGCGACAGGAGCTACCgggg                                         >  2:2161395/1‑140 (MQ=255)

                                                                                               gggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGACCTACCGGGGAAGCCGGACCACCCGGAGCGACCGGAGCTACCgggg                                         >  1:2047655/1‑140 (MQ=255)

                                                                                                    cGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCCCAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGCAGcc                                    >  1:1557119/1‑140 (MQ=255)

                                                                                                    cGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGcc                                    >  1:1294547/1‑140 (MQ=255)

                                                                                                    cGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCGACTGGGGCAGCCGGACCCGCCGGAGCGACAGGAGCTACCGGGGCCGCCGGACCAGCCGGAGCGCCAGGAGCTACGCGGGCAGcc                                    >  1:1600104/1‑140 (MQ=14)

                                                                                                       cAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcaca                                                                                                                              <  2:2701743/47‑1 (MQ=255)

                                                                                                       cAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcaca                                                                                                                              >  1:2701743/1‑47 (MQ=255)

                                                                                                               aCCGGCGAACCAGGACCAGCCGGCGCCCCGGGCGCCAACGGTGCAACTGGCCACGCGGGACCACCCGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCgg                         <  2:626122/140‑1 (MQ=14)

                                                                                                                ccGGTGAAGCCGGACCAGCCGGCGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGa                        <  1:316810/140‑1 (MQ=255)

                                                                                                                 cGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAg                       <  2:2579501/140‑1 (MQ=255)

                                                                                                                     gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCgcc                   >  2:1947581/1‑138 (MQ=255)

                                                                                                                        gCCCGACCACCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAgg                <  1:1673424/140‑1 (MQ=255)

                                                                                                                          cGGACCCGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAg              <  1:1431584/140‑1 (MQ=255)

                                                                                                                          cGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAg              <  1:478078/140‑1 (MQ=255)

                                                                                                                          cGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAg              <  1:2025016/140‑1 (MQ=255)

                                                                                                                                  ccGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCggg      >  2:874373/1‑140 (MQ=255)

                                                                                                                                      ggCCACGGGAGCCACAGGGGCTAGTGGGGAAGGCGGACCAGCCGGAGCGAGAGGAGCTACCGGGGACGCCGGACCACCCGGAGCGCCAGGAGCGACGGGGGACGCAGGACCACGCGGAGCGGCGGGAGCGAcctgcgggg  >  1:1016176/1‑133 (MQ=255)

                                                                                                                                      ggCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAg  <  1:874373/140‑1 (MQ=255)

GCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAG  >  NZ_CP034943/607428‑607701

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.