BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 1773981	215 (1.150)	3 (0.020)	3/268	10.2	1.5%	coding (12490/15141 nt)	EO946_RS09125	non‑ribosomal peptide synthetase
*	?	NZ_CP034943	= 3717287	175 (0.940)	3 (0.020)	3/268	10.2	1.5%	intergenic (‑189/‑131)	spsA/gerQ	spore coat dTDP‑glycosyltransferase SpsA/spore coat protein GerQ
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 178 total aligned reads displayed.

ATGTTGCTTATGCGCAAATTGCGCTAGGGATACAAACCAATATGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCTATACATCCGGAACATGTTTTGATTGGTTTTCATAAAAAGGAGGAACGATATGAA  >  NZ_CP034943/3717148‑3717422

aTGTTGCTTATGCGCAAATTGCGCTAGGGATACAAACCAATATGAGAAAAGTTTTTGTATGTCTATGAAAAACAGCGGCTGACCAGATTGAAATCTATGCCGTCTGCTGCTCTTGTTCCGAATATTCCAAGCATCAGCCt                                                                                                                                         >  2:2337148/1‑140 (MQ=255)

 tGTTGCTTATGCGCAAATTGCGCTAGGGATACAAACCAATATGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTc                                                                                                                                        >  1:687421/1‑140 (MQ=255)

  gTTGCTTATGCGCAAAGTGCGCTAGGGATACAAACCAATATGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCa                                                                                                                                       <  2:573428/140‑1 (MQ=255)

      cTTATGCGCAAATTGCGCTAGGGATACAAACCAATATGAGAAAAGTTTGTGTATGTCTATGAAAAACCGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAg                                                                                                                                   >  1:2061278/1‑140 (MQ=255)

      cTTATGCGCAAATTGCGCTAGGGATACAAACCAATATGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAg                                                                                                                                   >  1:239047/1‑140 (MQ=255)

      cTTATGCGCAAATTGCGCTAGGGATACAAACCAATATGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAg                                                                                                                                   >  1:536043/1‑140 (MQ=255)

      cTTATGCGCAAATTGCGCTAGGGATACAAACCAATATGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAg                                                                                                                                   >  1:604794/1‑140 (MQ=255)

      cTTATGCGCAAATTGCGCTAGGGATACAAACCAATATGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAg                                                                                                                                   >  1:624289/1‑140 (MQ=255)

      cTTATGCGCAAATTGCGCTAGGGATACAAACCAATATGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAg                                                                                                                                   >  1:1757592/1‑140 (MQ=255)

      cTTATGCGCAAATTGCGCTAGGGATACAAACCAATATGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAg                                                                                                                                   >  1:747341/1‑140 (MQ=255)

      cTTATGCGCAAATTGCGCTAGGGATACAAACCAATATGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAg                                                                                                                                   >  1:947972/1‑140 (MQ=255)

      cTTATGCGCAAATTGCGCTAGGGATACAAACCAATATGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAg                                                                                                                                   >  1:970722/1‑140 (MQ=255)

      cTTATGCGCAAATTGCGCTAGGGATACAAACCAATATGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAg                                                                                                                                   >  1:51500/1‑140 (MQ=255)

      cTTATGCGCAAATTGCGCTAGGGATACAAACCAATATGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAg                                                                                                                                   >  1:1396748/1‑140 (MQ=255)

      cTTATGCGCAAATTGCGCTAGGGATACAAACCAATATGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAg                                                                                                                                   >  1:2649300/1‑140 (MQ=255)

      cTTATGCGCAAATTGCGCTAGGGATACAAACCAATATGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAg                                                                                                                                   >  1:1029836/1‑140 (MQ=255)

      cTTATGCGCAAATTGCGATAGGGATACAAACCAATATGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGAGTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAg                                                                                                                                   >  2:2140103/1‑140 (MQ=255)

            cgcAAATTGCTCTAGGGATACAAACCAATATGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGaaa                                                                                                                             <  2:933929/140‑1 (MQ=255)

            cgcAAATTGCGCTAGGGATACAAACCAATATGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGaaa                                                                                                                             <  1:1528077/140‑1 (MQ=255)

            cgcAAATTGCGCTAGGGATACAAACCAATATGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGaaa                                                                                                                             <  1:1615476/140‑1 (MQ=255)

            cgcAAATTGCGCTAGGGATACAAACCAATATGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGaaa                                                                                                                             <  1:723569/140‑1 (MQ=255)

             gcAAATTGCGCTAGGGATACAAACCAATATGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAag                                                                                                                            <  1:416428/140‑1 (MQ=255)

                           ggATACAAACCAATATGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCa                                                                                                              >  1:1328018/1‑140 (MQ=255)

                              tACAAACCACTATGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCa                                                                                                           <  2:671051/140‑1 (MQ=255)

                                cAAACCAATATGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGc                                                                                                         <  2:1896442/140‑1 (MQ=255)

                                      aaTATGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTaa                                                                                                   >  2:33105/1‑140 (MQ=255)

                                        tatGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTcaaa                                                                                                 >  1:1003841/1‑140 (MQ=255)

                                        tatGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTaaaa                                                                                                 >  1:1003854/1‑140 (MQ=255)

                                        tatGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTaaaa                                                                                                 >  2:2074187/1‑140 (MQ=255)

                                        tatGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTaaaa                                                                                                 >  2:912884/1‑140 (MQ=255)

                                             gaAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGtt                                                                                            >  2:2814091/1‑140 (MQ=255)

                                              aaaaGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTACAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGttt                                                                                           >  1:1082647/1‑140 (MQ=255)

                                              aaaaGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTATTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGttt                                                                                           <  2:1790232/140‑1 (MQ=255)

                                                  gTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCa                                                                                       >  2:116592/1‑140 (MQ=255)

                                                  gTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCa                                                                                       >  2:117712/1‑140 (MQ=255)

                                                   tttGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCAt                                                                                      <  2:747242/140‑1 (MQ=255)

                                                     tgtgTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCg                                                                                    >  1:1676623/1‑140 (MQ=255)

                                                     tgtgTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCg                                                                                    >  2:520540/1‑140 (MQ=255)

                                                     tgtgTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCg                                                                                    >  1:658107/1‑140 (MQ=255)

                                                      gtgtATGTCTATGAAAAACAGCGGCTGCCGAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCgg                                                                                   <  1:1927735/140‑1 (MQ=255)

                                                      gtgtATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCgg                                                                                   >  2:1239012/1‑140 (MQ=255)

                                                             tCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAg                                                                            <  1:381753/140‑1 (MQ=255)

                                                             tCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAg                                                                            <  2:294047/140‑1 (MQ=255)

                                                              cTATGAAATACAGCGGCTGCCCAGATTGAAATCTTTGCCGTCTGCTGCTCATTTTCCGCATATTGCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCTGAGGTGAGt                                                                           <  2:143400/140‑1 (MQ=255)

                                                                 tGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAgg                                                                                <  1:1992788/132‑1 (MQ=255)

                                                                 tGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAgg                                                                                <  1:1992716/132‑1 (MQ=255)

                                                                 tGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAgg                                                                                >  2:1992647/1‑132 (MQ=255)

                                                                 tGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAgg                                                                                >  2:1992788/1‑132 (MQ=255)

                                                                 tGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCAt                                                                        >  1:1082928/1‑140 (MQ=255)

                                                                 tGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCAt                                                                        >  1:1614483/1‑140 (MQ=255)

                                                                     aaaCAGCGGCTGCCCAGCTGGAAATCTATGCCGTCTGCTGCTCTATTTCCGCATATTCCCAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATcgcg                                                                    <  2:1543486/140‑1 (MQ=255)

                                                                     aaaCAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAACTCGTTTTCCATCGGAGGTGAGTCATcgcg                                                                    <  2:373805/140‑1 (MQ=255)

                                                                     aaaCAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATcgcg                                                                    <  1:232744/140‑1 (MQ=255)

                                                                     aaaCAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATcgcg                                                                    <  2:1243860/140‑1 (MQ=255)

                                                                     aaaCAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATcgcg                                                                    <  2:2649389/140‑1 (MQ=255)

                                                                     aaaCAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATcgcg                                                                    <  2:2649300/140‑1 (MQ=255)

                                                                     aaaCAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATcgcg                                                                    <  1:2018954/140‑1 (MQ=255)

                                                                        cAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTGTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAACTCGTTTTCCATCGGAGGTGAGTCATCGCGGAg                                                                 <  2:1942172/140‑1 (MQ=255)

                                                                          gCGTCTGCCCAGATTGAAATCTATGCCGTCTGCTGATCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCg                                                               <  1:2282012/140‑1 (MQ=255)

                                                                          gCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCg                                                               <  2:638581/140‑1 (MQ=255)

                                                                          gCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCg                                                               <  1:2125273/140‑1 (MQ=255)

                                                                            ggCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGtt                                                             <  2:57594/140‑1 (MQ=255)

                                                                            ggCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGtt                                                             <  2:1914585/140‑1 (MQ=255)

                                                                             gCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTATTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGACATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTc                                                            <  1:231892/140‑1 (MQ=255)

                                                                                  ccAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCta                                                       <  2:2370885/140‑1 (MQ=255)

                                                                                          aaaTCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTGTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCTATACATCCg                                               >  2:2114645/1‑140 (MQ=255)

                                                                                             tCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCTATACATCCGGaa                                            <  1:799434/140‑1 (MQ=255)

                                                                                               tATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTc                                                            <  1:2134318/122‑1 (MQ=255)

                                                                                                aTGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCg                                                               <  2:309831/118‑1 (MQ=255)

                                                                                                aTGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCg                                                               >  2:212679/1‑118 (MQ=255)

                                                                                                aTGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCg                                                               >  1:309831/1‑118 (MQ=255)

                                                                                                aTGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCg                                                               >  2:898351/1‑118 (MQ=255)

                                                                                                aTGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCTATACATCCGGAACAt                                         >  2:2374257/1‑140 (MQ=255)

                                                                                                aTGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCTATACATCCGGAACAt                                         >  1:2499555/1‑140 (MQ=255)

                                                                                                aTGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCTATACATCCGGAACAt                                         >  1:2130062/1‑140 (MQ=255)

                                                                                                aTGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCTATACATCCGGAACAt                                         >  2:659002/1‑140 (MQ=255)

                                                                                                aTGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCTATACATCCGGAACAt                                         >  1:708281/1‑140 (MQ=255)

                                                                                                 tGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCTATACATCCGGAACATg                                        >  1:1893974/1‑140 (MQ=255)

                                                                                                      tCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCTATACATCCGGAACATGTTTTg                                   >  2:2706402/1‑140 (MQ=255)

                                                                                                      tCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCTATACATCCGGAACATGTTTTg                                   >  1:1034308/1‑140 (MQ=255)

                                                                                                      tCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCTATACATCCGGAACATGTTTTg                                   >  2:2501062/1‑140 (MQ=255)

                                                                                                        tgctgcTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCAt                                                                                      >  1:2586160/1‑87 (MQ=255)

                                                                                                             ctctTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCTATACATCCGGAACATGTTTTGATTGGtt                            >  1:2669765/1‑140 (MQ=255)

                                                                                                                  tttCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCTATACATCCGGAACATGTTTTGATTgg                              >  1:1427256/1‑133 (MQ=255)

                                                                                                                  tttCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCTATACATCCGGAACATGTTTTGATTgg                              <  2:1427256/133‑1 (MQ=255)

                                                                                                                  tttCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCTATACATCCGGAACATGTTTTGATTGGTTTTCag                       >  1:1729889/1‑139 (MQ=255)

                                                                                                                  tttCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCTATACATCCGGAACATGTTTTGATTGGTTTTCAt                       >  1:2628744/1‑140 (MQ=255)

                                                                                                                      cGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCTATACATCCGGAACATGTTTTGATTGGTTTTCATaaaa                   <  2:708281/140‑1 (MQ=255)

                                                                                                                         atatTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCTATACATCCGGAACATGTTTTGATTGGTTTTCATAAAAagg                <  1:1239012/140‑1 (MQ=255)

                                                                                                                          tatTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCtat                                                      >  1:1293818/1‑101 (MQ=255)

                                                                                                                          tatTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCtat                                                      <  2:1293818/101‑1 (MQ=255)

                                                                                                                                     tCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCTATACATCCGGAACATGTTTTGATTGGTTTTCATAAAAAGGAGGAACGATATg    <  1:627613/140‑1 (MQ=255)

                                                                                                                                      cAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCtat                                                      <  1:166153/89‑1 (MQ=255)

                                                                                                                                      cAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCtat                                                      >  2:166153/1‑89 (MQ=255)

                                                                                                                                      cAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCTATACATCCGGAACATGTTTTGATTGGTTTTCATAAAAAGGAGGAACGATATGa   >  1:2486369/1‑140 (MQ=255)

                                                                                                                                      cAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGGTCATCTATACATCCGGAACATGTTTTGATTGGTTTTCATAAAAAGGAGGAACGATATGa   >  1:1196288/1‑140 (MQ=255)

                                                                                                                                       aGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCTATACATCCGGACCATGTTTTGATTGGTTTTCATAAAAAGGAGGAACGATATGaa  >  2:1906762/1‑140 (MQ=255)

                                                                                                                                       aGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCTATACATCCGGAACATGTTTTGATTGGTTTTCATAAAAAGGAGGAACGATATGaa  >  1:668076/1‑140 (MQ=255)

                                                                                                                                       aGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCTATACATCCGGAACATGTTTTGATTGGTTTTCATAAAAAGGAGGAACGATATGaa  >  1:1714999/1‑140 (MQ=255)

                                                                                                                                       aGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCTATACATCCGGAACATGTTTTGATTGGTTTTCATAAAAAGGAGGAACGATATGaa  >  2:1126036/1‑140 (MQ=255)

ATGTTGCTTATGCGCAAATTGCGCTAGGGATACAAACCAATATGAGAAAAGTTTGTGTATGTCTATGAAAAACAGCGGCTGCCCAGATTGAAATCTATGCCGTCTGCTGCTCTTTTTCCGCATATTCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAAATCGCACCAGCGACTAAAATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCATCTATACATCCGGAACATGTTTTGATTGGTTTTCATAAAAAGGAGGAACGATATGAA  >  NZ_CP034943/3717148‑3717422

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.