Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0349431,730,0750GC35.1% 175.3 / 35.5 115E166Q (GAA→CAA) rodZcell shape determination protein RodZ
Reads supporting (aligned to +/- strand):  ref base G (45/27);  new base C (0/39);  total (45/70)
Fisher's exact test for biased strand distribution p-value = 1.80e-12
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 117 total aligned reads displayed.

CAGCGATGGTAACAATGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAG  >  NZ_CP034943/1729936‑1730208
                                                                                                                                           |                                                                                                                                     
cAGCGATGGTAACAATGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACgaaag                                                                                                                                       >  2:1986715/1‑140 (MQ=255)
          aaCAATGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAagaaga                                                                                                                             >  2:2010582/1‑140 (MQ=255)
               tGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAACGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGACAGGAAaggaagggcaaa                                                                                                                        >  1:2076946/1‑134 (MQ=255)
                gCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAATGAAAAAGAAGATaaaaa                                                                                                                       >  1:1375522/1‑140 (MQ=255)
                gCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATaaaaa                                                                                                                       >  1:1026834/1‑140 (MQ=255)
                 ccGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATaaaa                                                                                                                        >  2:626250/1‑138 (MQ=255)
                 ccGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATaaaa                                                                                                                        <  1:626250/138‑1 (MQ=255)
                  cGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaag                                                                                                                     >  2:1046492/1‑140 (MQ=255)
                  cGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaag                                                                                                                     >  2:2448335/1‑140 (MQ=255)
                  cGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaag                                                                                                                     >  1:849749/1‑140 (MQ=255)
                    cATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaagaa                                                                                                                   >  2:2081811/1‑140 (MQ=255)
                    cATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaagaa                                                                                                                   >  1:1997083/1‑140 (MQ=255)
                    cATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaagaa                                                                                                                   >  2:750130/1‑140 (MQ=255)
                     aTCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaagaag                                                                                                                  >  2:1307564/1‑140 (MQ=255)
                            aaataaatTACCAAAATTTAAAGAAATTACTAAATACAAAAAGATTAAACGATAAAATATAATAAAAGAAACAGCTATTAAAAAGAGGCAGAAACTAAAAAAGAAACGAAATAAAAAGAAGATAAAAAAGAAGAAAGCGa                                                                                                           <  2:2182278/140‑1 (MQ=255)
                            aaaTCAATTACGAAAATTTAAAGAAATTACTAAATACAAAATCATTAAACCCTAAAAGATAATAAAAGCAAAAGCTATGAAAAACAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAACAAGAAAGCGa                                                                                                           <  2:1734206/140‑1 (MQ=255)
                               aaaaTCACTCAAAGTTAACGAAAGTAATAAACCCAAAAATAATAACCGATAAAACATAATCAAAGAAACAGATCTGAAAAAGACGAACACAATAAAAAAGAAACGAAAGAAAAAGAACAAACAAAACAACAACGCGACAg                                                                                                        <  1:2876739/138‑1 (MQ=255)
                                         aatgtcaaaTCAAGTACCAAATCCCAAAACATTAAACGCTAAAATATAATAAAAGCAACATCTCTGAAAAACAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGACGATAAAAAAGAAGAAAGCGACAGTGATAAACTg                                                                                              <  2:1582038/134‑1 (MQ=255)
                                           aGTGAAAGCAAGTACGAAATCCCACAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAATAAGAAAGCGACAGTGATAAACTGga                                                                                            >  2:168061/1‑140 (MQ=255)
                                                 aGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTaa                                                                                      >  2:1446646/1‑140 (MQ=255)
                                                     aGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCa                                                                                  >  1:1644174/1‑140 (MQ=255)
                                                     aGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCa                                                                                  >  1:2041219/1‑140 (MQ=255)
                                                      gtaataaaTCCAAAAACATTCAACGCTAAAACAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAATAAACCAAACAAAAAGAAGATAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCaa                                                                                 <  2:849749/135‑1 (MQ=255)
                                                       tACGAAATCCCAAAATATTAAACTCTAAAAGAGAAACAAAGCAACAGCTCTTAAAAAGAGGAAGACAATAAAAAACAACCCAAAGAAAAAGAAGATAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                <  2:1026834/140‑1 (MQ=255)
                                                       tACGAAATCCCAAAAGATTCACCGATAAAAGATAATCAAAGCAACAGCTCTGAAAAAGAGGCACACACTAAAAAAGAAACGAAACAAAAATAAGATAAAAAATAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                <  2:2151616/140‑1 (MQ=255)
                                                       tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAGAACGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                >  2:1911895/1‑140 (MQ=255)
                                                       tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATCCTAAAGAAGAAAGCGACCGTGATAAAGTGGAGATTAAAGCAAc                                                                                >  1:2128730/1‑140 (MQ=255)
                                                       tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                >  1:880849/1‑140 (MQ=255)
                                                       tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                >  1:1513623/1‑140 (MQ=255)
                                                       tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                >  1:1167249/1‑140 (MQ=255)
                                                       tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                >  1:1801682/1‑140 (MQ=255)
                                                       tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                >  2:1591005/1‑140 (MQ=255)
                                                       tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                >  1:458763/1‑140 (MQ=255)
                                                       tACGAAATCCCAAAAGATTCAACGATAAAAGAGAATAAAAGCAAAATCTCTGAAAAAGAGGCAGACACAAAAAAAGAAACTAAATAAAAAGAACATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                <  2:710735/140‑1 (MQ=255)
                                                       tACGAAATCCCAAAACATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                >  1:2578320/1‑140 (MQ=255)
                                                       tACGAAATCCAAAAAGATTCAACGCTAAAAGACAAACAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                <  2:1375522/140‑1 (MQ=255)
                                                       cactaaaTCCAAAAATATTAAACCATAAAACAGAATCAACCCAACACCTCTTAAAAAGAGGCAGACACTAAAAAACAAACCAAACAAAAACAACAAAAAAAACAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                <  1:2727193/136‑1 (MQ=255)
                                                         ctaaaaCCCAAAATATTCAACGCTAAAATATAATCAAAGCAACAGCTCTTAAAAATAGGCATACACTAAAAAACAAACGAAAGAAAAACAAGATAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTg                                                                              <  2:1110251/138‑1 (MQ=255)
                                                         ctaaaTCCAAAAAGATTAAACTCTAAAAGAGAATAAAAGAAACAGATCTTAAAAAGAGGCATAAAATAAAAAATAAACCAAACAAAAAGAAGATAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTg                                                                              <  2:2497011/138‑1 (MQ=255)
                                                         ctaaaTCCAAAAAGATACAACGATAAAATAGAATCAAAGAAACAGCTCTTAAAAATAGGAAGAAACTAAAAAAGAAACCAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTg                                                                              <  2:127326/138‑1 (MQ=255)
                                                         ctaaaCCCAAAAAGATTCAACTAAAAAACAGAATCAAAGAAACAGCTCTAAAAAATAGGCACACAATAAAAAATAACCGAAACAAACACAACATAAAAAAGAAGACCGCGACAGTGATAAACTGGAGATTAAAGCAACTg                                                                              <  1:2148618/138‑1 (MQ=255)
                                                                ccAAAAGATTCAACGCTAAAAGATAAACAAAGCAACAGCTCTGAAAAAGAGGCAGAAACTAAAAAATAAACGAAAGAAAAAGAACATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGa                                                                       <  2:2869128/140‑1 (MQ=255)
                                                                ccAAAAGAATCAACCAAAAACCAGAAACAACCCAACCGCTCTCAAAAACAGCCACACACTAAAAAACAAACGAACCAAACACAACAAAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGa                                                                       <  1:2192651/140‑1 (MQ=255)
                                                                 cAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGaa                                                                      >  2:1558847/1‑140 (MQ=255)
                                                                 cAAAAGATTCAACGATAAAAGATAATAAAAGCAACAGATATTAAAAAGAGGCAGACAATAAAAAACAAACGAAACAAAAAGAAGAAAAAAAACAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGaa                                                                      <  1:2139897/140‑1 (MQ=255)
                                                                 aaaaaGATTAAACGATAAAACACAAACAAAGCAACAGCTCTGAAAAAGAGCCACAAAAAAAAAAACAACCCAAACAAAAACAACATAAAAAACACCACCGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGaa                                                                      <  1:648418/139‑1 (MQ=255)
                                                                   aaaGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAgc                                                                    >  2:2727193/1‑139 (MQ=255)
                                                                    aaGATTCAACGATAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCATACACAAAAAAACAAACGAAACAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAggg                                                                   <  2:1982941/140‑1 (MQ=255)
                                                                         taaactatAAAATAGAATAAAAGCAAAAGATATTAAAAAGAGGCAGAAACTAAAAAAGAAACGAAAGAAAAAGAAAATAAAAAAGAAGAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCAtt                                                              <  2:464308/133‑1 (MQ=255)
                                                                         taaaCGATAAAACAGAAAAAAAGAAACAGCTCTTAAAAAGCGCCATAAAATAAAAAACAAACGAAACAAAAAGAAGATAAAAAAGACCAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCAtt                                                              <  2:169166/138‑1 (MQ=255)
                                                                         tCAACGCTAAACGACAAACAAAGCCACCGCTCTGAAAAAGAGGCACACACTAAAAAACAAACCAAAGAAAAAGAACATAAAAAAGAACCAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCAtt                                                              <  2:459958/140‑1 (MQ=255)
                                                                            actaaaaaaGAGAACAAAAGCAACAGCTCTGAAAAAGAGGCACACACTAAAAAACAAACCAACCAAAACGAACATAAAAACCAAGAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                           <  1:1986715/135‑1 (MQ=255)
                                                                            accatAAAAGAGAATCAAACCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAATACACGAAAGAAAAAGAAGAAAAAAAACAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                           <  1:2870923/136‑1 (MQ=255)
                                                                            accacaaaaGACAAAAAAACAAACACCTCTCAAAAACACGCAGACAAAAAAAAACAAACCAAACAAAAACAACATAAAAAACCACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                           <  1:2378174/135‑1 (MQ=255)
                                                                            aCGCTAAAATAGAATCAACGCAACAGATATTAAAAAGAGGCATACACTAAAAAATAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                           <  2:1447734/140‑1 (MQ=255)
                                                                            aCGCTAAAAGACAATCAAAGCAACAGATATTAAAAAGAGGCACACACAAAAAAACAAACCAAACAAAAAGAAGATAAAAAACAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                           <  2:1997083/140‑1 (MQ=255)
                                                                            aCGCTAAAACACAATCAAAGAAACAGCTCTGAAAAAGAGCCACACAATAAAAAAGAAACCAAACAAAAAGAACATAAAAAACAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                           <  1:2285150/140‑1 (MQ=255)
                                                                            aCGCTAAAACACAAAAAAACCAACACATCTTAAAAAGACGCAGACACTAAAAAACAAACGAAAGAAAAACAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                           <  2:2800571/140‑1 (MQ=255)
                                                                            aCGCAAAACTAGACTCAACGCAACAGCTCTGAAAAAGAGGCACACAATAAAAAATAAACCAAAGAAAAAGAAGATAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                           <  2:1082278/140‑1 (MQ=255)
                                                                            aCGCAAAAACACAACCAAACCAACAGATATCAAAATCAGCCACACACAAAAAACCAAACCAAACAAAAACACCAAAAAAAACACCAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                           <  1:1715931/140‑1 (MQ=255)
                                                                            aCGATAAATGAAAATAAAAGCAACACTTCTGAAAAATCGGCAGACAATAAAAAATAAACCAAAGAAAAAGAACATAAAAACGACGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                           <  1:2871154/140‑1 (MQ=255)
                                                                            aCGATAAAATAGAATAAAAGCACCAGCTCTGAAAAAGAGTCAGAAACTAAAAAACAAACCAAACAAAACGAACATAAAAAAGAAGACAGCGACAGTGATAAACTGGAGTTTAAAGCAACTGGCACTGAAGGGTCATTacc                                                           <  2:443277/140‑3 (MQ=255)
                                                                            aCGATAAAAGACAATAAAAGCAACAGCTATTAAAAAGAGGCAGACACTAAAAAAGAAACCAAACAAAAACAAGATAAAAAACAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                           <  2:2434545/140‑1 (MQ=255)
                                                                            aCGATAAAACAGAATCAAACCAACAGCTCTAAAAAAGAGCCACACACAAAAAAATAAACCAAACAAAAACAACATAAAAAACACCCCCGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                           <  1:1716165/140‑1 (MQ=255)
                                                                               cTAAAACACAAACAAACCAACAGCTCTTAAAAAGAGGAACACAATAAAAAACAAACCAAACAAAAAGAACAAAAAAAACACCAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGAc                                                        <  1:1292381/140‑1 (MQ=255)
                                                                               aaaaaataaaatAAAACCAACAGCACTGAAAAAGAGCCACAAACTAAAAAACAAACCAAACAAAAACAACAAAAAAACCACCAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGAc                                                        <  1:2652204/138‑1 (MQ=255)
                                                                                    cgataaTCAAAGCAAAAGCTCTGAAAAAGAGGCAGACACTAACAAAGAAACGAACGAAAAACAAGATAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATg                                                   <  2:1406445/136‑1 (MQ=255)
                                                                                    agatAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAACAAAAACAAGATAAAAAAGAAGACAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATg                                                   <  2:2220040/140‑1 (MQ=255)
                                                                                      acaaTAAAACCAACCGATATCAAAAAGAGCCACACACAAAAAAACAAACCAAACAAAAACAACATAAAAACCAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGaa                                                 <  1:728002/138‑1 (MQ=255)
                                                                                        aaTCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGACAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgt                                               >  1:1913309/1‑140 (MQ=255)
                                                                                        aaTCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgt                                               >  1:2789247/1‑140 (MQ=255)
                                                                                        aaTCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgt                                               >  2:680735/1‑140 (MQ=255)
                                                                                        aaTCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgt                                               >  2:2425097/1‑140 (MQ=255)
                                                                                        aaTCAAACAAACCGAACTCAAAAAGAGCCAAAAAATAAAAAAAAACCAAAACAAAAACAACAAAAAACACCACACCGCGACAGTGATAAACTGGAGATTAACGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgt                                               <  1:476724/140‑1 (MQ=255)
                                                                                          tCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTTGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgtgt                                             >  2:351587/1‑140 (MQ=255)
                                                                                          tCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgtgt                                             >  2:1320569/1‑140 (MQ=255)
                                                                                           caacccAACAGATCTCAAAACGCGGCAGACACTAAAAACAAAACCAAACAAAAACACCAAAAAACCCACCCCCGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACGGAAGGGTCATTAACGACTTATGAAGTGTc                                            <  1:2448335/135‑1 (MQ=255)
                                                                                              aGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                >  1:2747451/1‑101 (MQ=255)
                                                                                              aGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                <  2:2747451/101‑1 (MQ=255)
                                                                                                cAACAGATATTAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAACACGAAGATAAAAAAGAAGAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGgcg                                       <  2:1904635/140‑1 (MQ=255)
                                                                                                      ctctGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTgaga                                 >  1:218985/1‑140 (MQ=255)
                                                                                                               agagCCAGACACTAAAAAACAAACGAAAGAAACACAAGATAAACAAGAAGAAAGCGACCGTGATAAACGGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGc                        <  2:2250666/140‑1 (MQ=255)
                                                                                                                gagGCATAAACTAAAAAATAAACGAAAGAAAAATAAGATAAAAAAGCAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCt                       <  2:437786/140‑1 (MQ=255)
                                                                                                                gagGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCt                       >  2:1251419/1‑140 (MQ=255)
                                                                                                                      gACACTAAAAAATAAACCAAAGAAAAATAATATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACt                 <  2:2783652/140‑1 (MQ=255)
                                                                                                                        cacTAAAAAACAAACGAAACAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa               <  2:2128730/140‑1 (MQ=255)
                                                                                                                        caatAAAAAAGAAACGAAATCAAAAGAAGATAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa               <  2:2334449/137‑1 (MQ=255)
                                                                                                                        aacTAAAAAATAAACTAAACAAAAAGAACATAAAAAATAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa               <  2:458763/139‑1 (MQ=255)
                                                                                                                        aaatAAAAAACAAACGAAACAAAAAGAATATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa               <  2:1801682/137‑1 (MQ=255)
                                                                                                                        aaatAAAAAACAAACGAAACAAAAAGAAGATAAAAAAGAATAAAGCGACAGTGATAAACTGGAGATTAAAGCAAGTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa               <  2:2726948/137‑1 (MQ=255)
                                                                                                                          caaaaaaaCAAACGAAAGAAAAATAACATAAAAACGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAg             <  1:2028480/138‑1 (MQ=255)
                                                                                                                          atAAAAAACAAACCAAACAAAAAGAAGATAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAg             <  1:1053289/139‑1 (MQ=255)
                                                                                                                           tAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAgg            >  1:1080233/1‑140 (MQ=255)
                                                                                                                             aaaaaGAAACGAAACAAAAATAAGATAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCa          <  1:1682258/140‑1 (MQ=255)
                                                                                                                                  gAAACGAAAGAAAAAGAACATAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGa     <  2:2585106/140‑1 (MQ=255)
                                                                                                                                  caaaCCAAACAAAATCAACATAAAAAAGACGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGa     <  1:848113/139‑1 (MQ=255)
                                                                                                                                   aaaCGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAAGACTTATTAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTCAAGGCATCAGaa    >  2:200939/1‑139 (MQ=255)
                                                                                                                                     aCGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAATGCATCAGACAg  >  2:1491656/1‑140 (MQ=255)
                                                                                                                                     aCGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAg  >  2:2221819/1‑140 (MQ=255)
                                                                                                                                     aCGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATGCGAGCTCGAACTGAAGGCATCAGACAg  >  1:706407/1‑140 (MQ=255)
                                                                                                                                           |                                                                                                                                     
CAGCGATGGTAACAATGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAG  >  NZ_CP034943/1729936‑1730208

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑