| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,097,399 | C→A | 5.4% | Q48K (CAA→AAA) | EO946_RS05675 → | MarR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,097,399 | 0 | C | A | 5.4% | 619.9 / 8.7 | 206 | Q48K (CAA→AAA) | EO946_RS05675 | MarR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (102/87); new base A (2/14); total (105/101) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.40e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 211 total aligned reads displayed.
ATACAGATCATACGAAACGCAACATTTTTGAATTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTT > NZ_CP034943/1097262‑1097538 | aTACAGATCATACGAAACGCAACATTTTTGAATTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCaa < 1:3629658/140‑1 (MQ=255)aTACAGATCATACGAAACGCAACATTTTTGAAGTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGTGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCaa < 1:2183174/140‑1 (MQ=255) aTCATACGAAACGCAACATTTTTTAATTAAATCCTTAGATAATTAATCAGCACGAGAAATGGGAGGTGATCATTAAATCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCg > 2:1117356/1‑140 (MQ=255) aTCATACGAAACGCAACATTTTTGAATTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCg > 1:978493/1‑140 (MQ=255) aTCATACGAAACGCAAAATTTTTTAATTATATGCGGAGCTAATTAATCAGCAGGAGAAATGGGAGTGGCTCATTAAAGACTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCg > 2:572416/1‑140 (MQ=255) aTACGAAACGCAACATTTTTGAATTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATg > 1:2100277/1‑140 (MQ=255) aCGAAACGCAACATTTTTGAATTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGTCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATGATCGATGAc > 1:3399584/1‑140 (MQ=255) aCGAAACGCAACATTTTTGAATTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGAc > 2:1737115/1‑140 (MQ=255) aCGAAACGCAACATTTTTGAATTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGAc > 1:2193515/1‑140 (MQ=255) cGAAACGCAACATTTTTGAATTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACa < 1:3462031/140‑1 (MQ=255) cGAAACGCAACATTTTTGAATTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACa < 1:3864454/140‑1 (MQ=255) cGAAACGCAACATTTTTGAATTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACa < 1:1879467/140‑1 (MQ=255) cGAAACGCAACATTTTTGAATTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACa < 2:1424709/140‑1 (MQ=255) aaaCGCAACATTTTTGAATTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTTAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGa < 2:2663243/140‑1 (MQ=255) aaaCGCAACATTTTTGAATTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGa < 2:2694129/140‑1 (MQ=255) aaaCGCAACATTTTTGAATTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGa < 2:665791/140‑1 (MQ=255) aCGCAACATTTTTGAATTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGaaa > 1:3481252/1‑140 (MQ=255) aCGCAACATTTTTGAATTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGaaa > 1:2716353/1‑140 (MQ=255) aaCATTTTTGAAGTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCa > 2:1956316/1‑140 (MQ=255) ttttGAATTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGttc > 2:2763027/1‑140 (MQ=255) gAATTATATGCGGAGCTCATTCATCAGCCGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGttctttc < 2:2317959/140‑1 (MQ=255) aTTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTtctttctt < 2:2730370/140‑1 (MQ=255) aTTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTtctttctt < 2:1152157/140‑1 (MQ=255) aTTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTtctttctt < 2:924834/140‑1 (MQ=255) aTTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTtctttctt < 2:425912/140‑1 (MQ=255) atatGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTtgtg < 2:3224727/140‑1 (MQ=255) atatGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTtgtg < 1:3164974/140‑1 (MQ=255) atatGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTtgtg < 1:3700122/140‑1 (MQ=255) tatGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTgtgt < 1:1121743/140‑1 (MQ=255) cGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTggg < 2:2104595/140‑1 (MQ=255) cGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTggg < 1:157986/140‑1 (MQ=255) cGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTggg < 2:3753663/140‑1 (MQ=255) aGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTGAATTATCGATGACAGAAATTAATGTTCTTTCTTGTGTTGGGTAc > 2:717510/1‑140 (MQ=255) aGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGGGTTGGGGAc > 2:3474981/1‑140 (MQ=255) gCTCATTCATCAGCAGGAGACATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCACTTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACa < 1:2954762/140‑1 (MQ=255) gCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACa < 1:31090/140‑1 (MQ=255) gCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACa < 1:3367482/140‑1 (MQ=255) gCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACa < 1:1821034/140‑1 (MQ=255) cTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACaa > 1:1499374/1‑140 (MQ=255) cTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACaa > 1:1345199/1‑140 (MQ=255) attcatCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACTGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGa > 2:2768797/1‑140 (MQ=255) attcatCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTgg < 1:1400735/131‑1 (MQ=255) ttcatCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATAGATTACAGAAATTGATGTTATTTCTTGTGTTGGGGACAATGat < 2:3273735/140‑2 (MQ=255) cagcagGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACcaat < 2:3724997/140‑1 (MQ=255) cagcagGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACcaat < 2:3840823/140‑1 (MQ=255) cagcagGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACcaat < 1:3080352/140‑1 (MQ=255) agcagGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACcaatc > 2:3493598/1‑140 (MQ=255) agcagGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACcaatc > 2:82496/1‑140 (MQ=255) agcagGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTAAATTATCGATGACAGAAATTCATGTTCTTTCTTTTGTTGGGGACAATGAACaaatc > 2:2891859/1‑140 (MQ=255) agGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACcaatcaat > 2:2801327/1‑140 (MQ=255) agGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACcaatcaat > 1:3314989/1‑140 (MQ=255) gagaAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGt > 1:168044/1‑140 (MQ=255) gagaAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGt > 2:1324102/1‑140 (MQ=255) agaAATGGGAGGGGCTCATTAAAGCCTTGTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTc < 2:2808229/140‑1 (MQ=255) gaAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACa < 2:1260316/122‑1 (MQ=255) gaAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACa > 1:1260316/1‑122 (MQ=255) gaAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGAAATAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATTTCa > 1:867483/1‑140 (MQ=255) aaaTGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCAc < 2:3235215/140‑1 (MQ=255) aggggAGGGGCTCATTAAACCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGTAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGt < 2:2368634/138‑1 (MQ=255) aTGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGTGGACAATGAACCAATCAATGTCACGt > 2:3423758/1‑140 (MQ=255) aTGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGt > 2:2570545/1‑140 (MQ=255) ggAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGTGGAAAATGAACCAATCAATGTCACGTCTa > 1:82527/1‑140 (MQ=255) aGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTAtt > 2:3620390/1‑140 (MQ=255) aGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTAtt > 1:2508482/1‑140 (MQ=255) ggCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCa > 1:1700937/1‑140 (MQ=255) ggCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCa > 1:345458/1‑140 (MQ=255) cTCATTAAAGCCTTTTTGGCTGACGAATTGGAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGa > 2:907731/1‑140 (MQ=255) ttAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGaaaaa < 2:1499374/140‑1 (MQ=255) gCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCATTCAATGTCACGTCTATTGCAGAAAAAATGaa < 1:2783238/140‑1 (MQ=255) gCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGaa < 2:4904/140‑1 (MQ=255) ttttGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTc > 1:3815901/1‑113 (MQ=255) ttttGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACg > 1:519491/1‑140 (MQ=255) ttttGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACg > 1:2173284/1‑140 (MQ=255) ttttGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACg > 1:2758258/1‑140 (MQ=255) tGGCTGACGAATTGAATAATCTCGATGTCGAGAAGGGGTGTAAATGTCAATTATCGATGACAGAAATTCATGTTCTTTGTTGTGTTGGGGACATTGAACCAATCAATGTCACGTCTTTTGCAGAAAAAATGAATACGACa < 2:1800201/140‑1 (MQ=255) gggCTGACGAAGTGACGCAGCTCCCTGGCGAGCACGGGAGTAAAAGTCACTTACCGAAGACCGAACTTCATGTTCGTTTTGGTGTGGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACa < 2:3186810/139‑1 (MQ=255) gCTGACTATTTTAAGACGCTCGATGTCGAGCACGGTAGTAATTATAATTTATCTCTTACAGAATTTCATTTTTTTTGTTGTGTTGGGTAAAATGAACAAATAAATGTCACGTTTATTGCATAAAAAATTAATACGACaaa < 2:786380/140‑1 (MQ=255) tGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAg > 2:3523715/1‑140 (MQ=255) gACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGc > 2:618348/1‑140 (MQ=255) gACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGc > 2:1051832/1‑140 (MQ=255) aCGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCg > 2:3867998/1‑140 (MQ=255) ctaaTTGAATACGCGCGATTTCGAGCAGGGTATTAAATCTAAATTATCGATGACATAAATTATTGTTGTTTGTTGTGTTGGGGAAAATCAACAAATCAATGTCACGTCTTTTCCATAAAAAATGAATACGACAAAAGCGa < 2:3335106/138‑1 (MQ=255) cGAATTGAAGACGCTCTATGGCGAGCAGGGGAGTAAATATCAATTATCTATGACAGAAATTCTTTTTGTTTCTTGTGTTGGGGACAATTAACAAATCATTGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGa < 2:3028084/140‑1 (MQ=255) gaagCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATcgc > 1:167072/1‑140 (MQ=255) gCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTTCAGAAAAAATGAATACGAAAAAAGAGACTGTATcgcgaa > 2:2445970/1‑138 (MQ=255) gCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCa > 1:91720/1‑140 (MQ=255) gCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCa > 1:2852497/1‑140 (MQ=255) ctctttGTCGAGCACGGGTTTAAATATAATTTATCTATCACATATATTATTGTTTTTTGTTGTTTTGGGCAAATTGAACAAATAATTTTCACGTCTTTTGCATAAAAAATGAATACCACAAAAGCGACTGTATCGCGCAt < 1:3013458/135‑1 (MQ=255) cTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCAt > 1:2569721/1‑140 (MQ=255) tGTCGAGCACGGTATTAAATCTAAATTATCGATGACACAAATTCTTGTTCTTTCTTGTGTTGGGCAAAATCAACCAAACAATGTCACGTCTTTGGCAAAAAAATTTAACCCCACAAAAGCGACTGTATCGCGCATCAGca < 1:1956316/140‑1 (MQ=255) ggtattAAATATCAATTATCGATCACACAATTTCTTTTTGTTTTTTGTTTTGGGCAAAATCAAAAAATAAATGTCACGTATATTGCACAAAAAATTAATACGAAAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCt < 1:837781/135‑1 (MQ=255) gggAGTAACCCTCATTTATCGATCACAGAATTTCTTGTTGTTTCTTGTGTGGGGGACAATCAACCAATCAATGTCACGTCTATTGCAGAAAAATTGAATACGAAAAACGCGACTGTATCGCGCATCAGCACAAAATTGCt < 2:2040791/140‑1 (MQ=255) gggAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCt > 1:120447/1‑140 (MQ=255) aaTCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGcgcg > 1:2398667/1‑140 (MQ=255) aTCTCAATTATCGATGAAATAAATTCTTGTTCTTTCTTGTTTTGGGTACAATGAACCAATCAATGTCACTTATATTGCATAAAAAATTAATACCACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCgg < 2:1394411/140‑1 (MQ=255) aTCTAATTTATCTATGACATAATTTATTTTTGTTTTTTGTGTTGGGCACAATCAACCAATCAATGTAACGTCTATTCAAAAAAAAATCAATCCCACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCgg < 1:2345770/140‑1 (MQ=255) aTCTAAATTATCTATGACAGAAAGTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATAAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCgg < 2:2242522/140‑1 (MQ=255) aTCTAAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCAGGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCgg < 2:2953810/140‑1 (MQ=255) ctcAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGt > 2:646330/1‑140 (MQ=255) ctcAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGt > 1:2293830/1‑140 (MQ=255) | ATACAGATCATACGAAACGCAACATTTTTGAATTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGACAATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTT > NZ_CP034943/1097262‑1097538 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |