| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,514,854 | T→G | 10.9% | intergenic (+58/+1) | EO946_RS07915 → / ← EO946_RS07920 | YlaH‑like family protein/YlaI family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,514,854 | 0 | T | G | 10.9% | 403.4 / 10.9 | 180 | intergenic (+58/+1) | EO946_RS07915/EO946_RS07920 | YlaH‑like family protein/YlaI family protein |
| Reads supporting (aligned to +/- strand): ref base T (61/93); new base G (24/2); total (85/95) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.70e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 180 total aligned reads displayed.
TCGCTGCGCTGATTTTAATCATTTACAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTGGCACATATATGTATGGATTGGGCGGTTTCG > NZ_CP034943/1514723‑1514989 | tcgCTGCGCTGATTTTAATCATTTACAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCGGCTGTtttttt > 1:1584655/1‑140 (MQ=255)tcgCTGCGCTGATTTTAATCATTTACAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTAttttt > 1:214948/1‑140 (MQ=255)tcgCTGCGCTGATTTTAATCATTTACAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCGTTAttttt > 1:3127417/1‑140 (MQ=255) cgctgcgctgATTTTAATCATTTACAAAATTCGGCTGTATCAGTCGAAAAGGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTGTTGTATGGTAAAGCGGCCGCTTTAtttttt > 2:128918/1‑140 (MQ=255) cgctgcgctgATTTTAATCATTTACAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTAtttttt > 1:3772874/1‑140 (MQ=255) cgctgcgctgATTTTAATCATTTACAAAATTCGGCGGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGACGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCGTTAtttttt > 1:2348466/1‑140 (MQ=255) cgctgcgctgATTTGTATCATTTACAAAATTCGGGTGTATCAGTCGTAAATGGGACAGTCTGCAAAATCATAAACAGACTCAGCTGAGAAGCTGTGGGTTTTGTTGGGTTGGGTCTGGTACAGCGGCGGGTGTAtttgtg > 2:2940211/1‑137 (MQ=255) gctgcgctgATTTTAATCATTTACAAAATTCGGCTTTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTTTATGGTAAATCGGCCGCTTGATTTTTTg > 2:3140888/1‑140 (MQ=255) gctgcgctgATTTTAATCATTTACAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTg > 2:3549296/1‑140 (MQ=255) gctgcgctgATTTTAATCATTTACAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCGTTAttttttt > 2:2418935/1‑139 (MQ=255) cgctgATTTTAATCATTTACAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGAcgt > 2:2735571/1‑138 (MQ=255) ctgATTTTAATCATTTACAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGGatttt > 1:757246/1‑140 (MQ=255) ctgATTTTAATCATTTACAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGAgtttt > 2:114061/1‑140 (MQ=255) aTTTTAATCATTTACAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGTctgtttgt > 2:3668611/1‑138 (MQ=255) aTTTTAATCATTTACAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGActttttct > 2:824504/1‑140 (MQ=255) aTTTTAATCATTTACAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGActttttct > 1:2967582/1‑140 (MQ=255) aTTTTAATCATTTACAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTGTTTAcgttttgt > 1:3148678/1‑138 (MQ=255) aTTTTAATCATTTACAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCGTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGActttttgt > 2:3673798/1‑138 (MQ=255) caTCATTTACAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTGTGTGTGTTGTATGGTAAAGCGGCCGCTTTATTTTTTGTCTTTTTCtttttt > 2:1816163/2‑140 (MQ=255) aaTCATTTACAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCATCGGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCGTTTTTTTTTGTGtttttttttttt > 1:642612/1‑140 (MQ=255) aaTCATTTACAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCtttttt > 2:444967/1‑140 (MQ=255) aaTCATTTACAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCtttttt < 2:3478675/140‑1 (MQ=255) aTTTACAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGc < 1:2444440/140‑1 (MQ=255) aTTTACAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGc < 1:3743080/140‑1 (MQ=255) aTTTACAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGc < 1:3742410/140‑1 (MQ=255) aTTTACAAAATTCGGCTGTATCAGTAGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGc < 1:2748660/140‑1 (MQ=255) tttACAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTTACTTTTTGgttttttttgt > 1:3004546/1‑137 (MQ=255) tttACAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCt > 1:949322/1‑140 (MQ=255) tttACAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCGTTATTTTTTGAGTTTTTGTTTTTTTTGCt > 1:1849051/1‑140 (MQ=255) cAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTcc < 1:707545/140‑1 (MQ=255) ttCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTGTATTTTTTGTCTTTTTGTTTTTTTTGCTGTCCCGGGt > 2:3788986/1‑140 (MQ=255) cGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTc < 2:2121030/140‑1 (MQ=255) aaaaGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGATGTCCCGGGTGAAAAGTGAATTTTCCCg > 2:2032635/1‑140 (MQ=255) aaaaGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTAATTTTTTACTTTTTGTTTTTTTTGCGTTACCCGGTGAAAATTGAATTTTCCCg > 1:1896348/1‑140 (MQ=255) aaaaGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTGTTGTGTTGTGTATGGTAAAGCGGCCGCTGTATTTTTTGACGTTTTGTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTACCg > 2:136284/1‑140 (MQ=255) ggACAGTCTGCAAAATCATAACAAGACTCAGCTGAGAAGCTGAGTCATTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTGTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGtttac < 1:1918966/140‑3 (MQ=255) gACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGTCTTTTTCTTTTTTTTGGTTTACCGGGTGAAAAGTTTATTTTACCGttttaa > 1:2533294/1‑138 (MQ=255) gACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTAATTTTTGACTTTTTCATTTTTTTGCTGTCCAGGGTGAAAATTTAATATTCACGttttaa > 2:727370/1‑138 (MQ=255) cAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGc < 2:3166214/140‑1 (MQ=255) gTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGGTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTACCGTTTTGAGcag > 2:719877/1‑138 (MQ=255) gTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTTACGTTTTGTTTTTTTTTGTTTGCCGGGTGAAAAGTGAATTTTCCCGGTTTAAGGCg > 1:833773/1‑140 (MQ=255) gTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCg < 2:1191622/140‑1 (MQ=255) gTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCGTTATTTTTTGACTTTTTCTTTTTTTTGCTGTACCGGGTGAAAAGTGAATTTTACCGTTTTGAGCCg > 2:1299206/1‑140 (MQ=255) gTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTATTTTTGTTTTTTGTATGTTAAAGCGGCCGCTTTTTTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCg < 2:918982/140‑1 (MQ=255) cAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCGTTTTTTTTTTTGTTGTTGTTTTTTTTGCTGTCCCGGGTGTAAATTGTATTTTACCGGTTTGAGCCGgtctt > 1:1886790/1‑140 (MQ=255) aaaTCATAAATAGACTCAGCGGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTGGCTGGCCCGGGTTAAAAGTGAATTTTCCGGTTTTCAGCCGTtcttct < 2:1289995/140‑1 (MQ=255) aaaTCATAAAAAGACTCAGGTTCGAAGCTGAGTATTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTtcttct < 2:489513/140‑1 (MQ=255) cATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGGCGGTTTGTTTTTTTTGGTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGGTCTTCTGttt > 1:2815859/1‑140 (MQ=255) cATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCGTTATTTTTTGAGGTTTTGTTTTTTTTTGTGTCGCCGGTGAAAAGTGAATTTTACCGGTTTAAGCCGTTGGTCTGttt > 1:329693/1‑140 (MQ=255) cATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCGTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCGCGGTTTCAGCCGTTCTTCTGttt > 2:2580705/1‑140 (MQ=255) tAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCGTTATGTTTTGACGTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTACCGTTTTAAGCCGTTCGTGTGttttt > 2:3564882/1‑140 (MQ=255) aaaGACTCAGCTGAGCAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGGGAAAAGTGAATTGTCCCGTTTTCAGCCGTTCTTCTGTTTTTTgg < 2:1660360/140‑1 (MQ=255) aaGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTGTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATGTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTggg < 2:175587/140‑1 (MQ=255) aaGACTCAGCTGAGAAGCTGAGTATTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTggg < 2:1474621/140‑1 (MQ=255) aCTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCGGTTTTTTTTGTCTTTTTGTTTTTTTTTGTGTCGCGGGGGGAAAGTGAATTTTGCCGGTTTGAGGCGGTGTTGTGTTTTTTggggac > 1:1250517/1‑137 (MQ=255) aCTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGGATGGTAAAGCGGCCGCTTTAGTTTTTGACTTTTTCTTTTTTTTTCTGTACCGGGTGAAAAGTTAATTTTCCCGGTTTCAGCCGTTCTTATGTTTTTTTGGCaa > 2:306282/1‑140 (MQ=255) aCTCAGCTGAGAAGCTGAGTCTTTGTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTTACTTTTTCTTTTTTTTGCTGTACCGGGTGAAAAGTTAATTTTCCCGTTTTCAGCCGTTCTTGTGTTTTTTTTGCaa > 2:604426/1‑140 (MQ=255) tCAGCTGAGAAGCTGAGTCTTTTTTTGTTTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGCCTTTTTCTTGTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATc < 2:3899283/140‑1 (MQ=255) tCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATc < 2:1960535/140‑1 (MQ=255) tCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATc < 2:257676/140‑1 (MQ=255) aGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGGATGGTAAAGCGGCCGCGTTATTTTTTTACGTTTTGGTTTTTTTGGTTTCCCGGGTGAAAAGTGAATTTTGCCGTTTTGAGCCGGTGGTGTGTTTTTTGGGGGATCCg > 1:2870897/1‑140 (MQ=255) cTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAACGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGt < 2:1738977/140‑1 (MQ=255) cTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTGTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGt < 2:365812/140‑1 (MQ=255) cTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTGTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGt < 1:3074754/140‑1 (MQ=255) gaAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTTACTTTTTATTTTTTTTTGTTTGCCGGGTGAAAATTTAATTTTACCGTTTTGATCCGGTCTTCGGTTTTTTTGGCAATCACGTCGTg > 1:511718/1‑140 (MQ=255) aaGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCCATCCGGTCGTgg < 2:2653043/140‑1 (MQ=255) aaGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCGTTATTTTTTGAGTTTTTGTTTTTTTTGGTGTCCCGGGTGAAAAGTTAATTTTACCGTTTTGAGCCGTGGTTGTGTTTTTTTGGCAATACGGGCGTgg > 1:2738336/1‑140 (MQ=255) cagAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGGCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCAt < 1:2657205/138‑1 (MQ=255) cTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCGATCCGGTCGTGGCAt < 1:2380210/140‑1 (MQ=255) cTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTATTTTTTTTTCTGTACCGGGTGAAAAGTGAATTTTACCGTTTTCAGCCGTTCTTCTTTTTTTTTGGCAATACGGTCGTGGCAt > 2:1520086/1‑140 (MQ=255) tGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCAtt < 1:2287326/140‑1 (MQ=255) gAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCGTTATTTTTTTTGATTTTCTTTTTTTTTGTTTCCCGGGTGTAAAGTGTATTTTGCCCTTTTTATCCGGTGTTCTTTTTTTTTTGGAATCCGGTCGTGGGATTc > 1:3160207/1‑140 (MQ=255) tCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTTAATTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTg < 1:4014067/140‑1 (MQ=255) tCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGCAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTg < 2:448150/140‑1 (MQ=255) cTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTgg < 2:1586536/140‑1 (MQ=255) cTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTgg < 1:3505999/140‑1 (MQ=255) cTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTCGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTgg < 1:444967/140‑1 (MQ=255) ttttttgttttttgTATGGTAAAGCGGCCTCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTGGca < 1:2418935/140‑1 (MQ=255) ttttttGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTGGca < 2:1535904/140‑1 (MQ=255) ttttttGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTGGca < 2:329693/140‑1 (MQ=255) ttttttGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTGGca < 2:2815859/140‑1 (MQ=255) ttttttGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTGGca < 2:655911/140‑1 (MQ=255) ttttttGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTGGca < 2:2394935/140‑1 (MQ=255) ttttttGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTGGca < 2:2319656/140‑1 (MQ=255) ttttGTGTTTTGTTTGGTAAAGCGGGCGCTTTATTTTTTGACTTTTTGTTTTTTTTGCTGTCCCGGGTGTAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTGGcaca < 1:544166/140‑1 (MQ=255) ttttGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATGCCTGGcaca < 1:3794157/140‑1 (MQ=255) ttttGTGTTGTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTGGcaca < 1:1001447/140‑1 (MQ=255) tcttGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTGACTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTGGcaca < 2:3735742/138‑1 (MQ=255) ttGTGTTTTGTATGGTCACGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGGCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTGGCACata < 2:2896434/140‑1 (MQ=255) ttGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTGGCACata < 1:1238650/140‑1 (MQ=255) ttGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTGGCACata < 1:2614884/140‑1 (MQ=255) ttGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTGGCACata < 2:1849051/140‑1 (MQ=255) ttGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTGGCACata < 2:3004546/140‑1 (MQ=255) ttGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTGGCACata < 2:204469/140‑1 (MQ=255) ttGTGGTTTGTATGGTCAAGCCGCCGGTTTATTTTTTGACTTTTGCTTTTTTTTGCGGGCCCGGGTGAAAAGTGAATTGTCCCGTTGTCAGGCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTGGCACata < 2:2581071/140‑1 (MQ=255) tgtgTTTTGTATGGAAACGCGGCCGCTTTTTTTTTTGAGTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTGGCACatat < 2:812542/140‑1 (MQ=255) tttGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTGGCACATAtatgta < 1:3564882/140‑1 (MQ=255) ttGTATGGTATACCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTGTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTGGCACATAtatgtat < 2:2052045/140‑1 (MQ=255) cGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTTCTGTACCCGGTTAAAAGTGAAATTTACCGTTTTAATCCGTTCTTCTGTTTTTTGGGGAATCCGGTAGTTGCATTACTGGCACAAATATGTATTGATTTGGCGGtt > 2:22466/1‑140 (MQ=255) ccGCTTTATTTTTTTACTTTTTGTTTTTTTTGCTGTCCCCGGTGAAAAGTGAATTTTCCCGTTTTAAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTGGCACATATATGTATGGATTGGGGGGTTTCg > 2:1429250/1‑140 (MQ=255) | TCGCTGCGCTGATTTTAATCATTTACAAAATTCGGCTGTATCAGTCGAAAAAGGGACAGTCTGCAAAATCATAAAAAGACTCAGCTGAGAAGCTGAGTCTTTTTTTGTGTTTTGTATGGTAAAGCGGCCGCTTTATTTTTTGACTTTTTCTTTTTTTTGCTGTCCCGGGTGAAAAGTGAATTTTCCCGTTTTCAGCCGTTCTTCTGTTTTTTGGGCAATCCGGTCGTGGCATTCCTGGCACATATATGTATGGATTGGGCGGTTTCG > NZ_CP034943/1514723‑1514989 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |