| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,294,907 | T→A | 6.0% | D288V (GAT→GTT) | eno ← | phosphopyruvate hydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,294,907 | 0 | T | A | 6.0% | 763.7 / 3.2 | 284 | D288V (GAT→GTT) | eno | phosphopyruvate hydratase |
| Reads supporting (aligned to +/- strand): ref base T (120/139); new base A (21/2); total (143/141) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.40e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 291 total aligned reads displayed.
TGCCTACGCCGTTTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCCAGACAGATGGTATTTGCCGTCTTCTTTGTTGTAGAACTCAGAAGATGCAGCATC > NZ_CP034943/3294770‑3295046 | tGCCTACGCCGTTTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCt < 1:648530/140‑1 (MQ=255)tGCCTACGCAGTTTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCt < 1:1009103/140‑1 (MQ=255) gCCTACGCCGTTTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCtt < 2:2912661/140‑1 (MQ=255) ccTACGCCGTTTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAATAAGCTTGTGGCCTTCCCAGTCGTTTTCGTAAATTGCATCtta > 2:503378/1‑139 (MQ=255) ccTACGCCGTTTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAATTCCATATTc > 2:3012353/1‑140 (MQ=255) ccTACGCCGTTTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAATTCCAACTTc > 1:3942820/1‑140 (MQ=255) ccTACGCCGTTTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTc > 1:1736812/1‑140 (MQ=255) ccTACGCCGTTTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTc > 2:1810555/1‑140 (MQ=255) ccTACGCCGTTTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTc > 2:1660750/1‑140 (MQ=255) ccTACGCCGTTTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTc > 2:2509515/1‑140 (MQ=255) ccTACGCCGTTTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTc > 1:219768/1‑140 (MQ=255) ccTACGCCGTTTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTc > 1:1486213/1‑140 (MQ=255) ccTACGCCGTTTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTc > 2:388539/1‑140 (MQ=255) ccTACGCCGTTTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTc > 2:3199117/1‑140 (MQ=255) ccTACGCCGTTTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCAACTTc > 1:2113923/1‑140 (MQ=255) ccTACGCCGTTTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCAATCTTc > 1:944244/1‑140 (MQ=255) ccTACGCCGTTTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTAGTCAAGTCCATCTTc > 1:2962179/1‑140 (MQ=255) ccTACGCCGTTTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTAGTCAAGTACAACTTc > 1:1922097/1‑140 (MQ=255) ccTACGCCGTTGTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATcgtg > 2:2516618/1‑137 (MQ=255) ccTACGCCGTGTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTAGTCAAGTCCAGCttg > 1:2252362/1‑139 (MQ=255) ccTACGCCGTGTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTGTTCGTCCAGTCAATCTTc > 2:634993/1‑140 (MQ=255) gCCGTTTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTGCATGTTCGATag > 2:3920488/1‑140 (MQ=255) gCCGTTTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATat > 2:1359974/1‑139 (MQ=255) gCCGTTTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATag < 1:2405543/140‑1 (MQ=255) gCCGTTTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCAACTTCGATag > 1:389894/1‑140 (MQ=255) gCCGTTTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTAGTCAAGTACATCATGGATag > 1:1300934/1‑140 (MQ=255) tttttGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAgat > 2:1970566/1‑140 (MQ=255) ttttGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAgaga < 1:730426/138‑1 (MQ=255) tttGATACCTTCAGCAAGTTTTTTCGTGTTACTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCATTCGTTTTCGTCAATTCCATCTTCGATagataaga > 2:3849011/1‑135 (MQ=255) tGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGAtt < 2:3091002/140‑1 (MQ=255) tGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGAtt < 2:589956/140‑1 (MQ=255) tACCTTCAGCAAGTTTGTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTggg < 2:3980284/140‑1 (MQ=255) tCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCCAGTCCAACTTCGATAGAGATGATTTGGTAttt > 2:2772516/1‑140 (MQ=255) cAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTGCGATAGAGATGATTTGGTATTTa > 2:1297775/1‑140 (MQ=255) aGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGa > 2:2990521/1‑119 (MQ=255) ttCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGGCAACTCCATCTTCGATAGAGATGATTTGGTATTTATAAACCAtttg > 2:3607437/1‑139 (MQ=255) ttGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTAc < 1:1522949/140‑1 (MQ=255) gTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCa < 1:361948/140‑1 (MQ=255) cGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTACGTACCAGTCa < 1:2989057/140‑1 (MQ=255) agGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCAt < 2:1139835/140‑1 (MQ=255) atcaCCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTGAAGTCCATCTTCGGTATTGATGTTTGGGTATTTATAAACCAGTTGTTAGGTCCAGTGAACCATTTgag > 1:2316031/1‑140 (MQ=255) caCCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTcagca < 2:2158608/140‑1 (MQ=255) caacaaGCTGAACTTTTTTGCCAGGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGAt < 2:2331584/140‑1 (MQ=255) caacaaGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGAt < 2:1446059/140‑1 (MQ=255) acaaGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATTATTGGGTATTTAGAAACCATTTGTTGGTTCCAGTCAACCATTTCATGAGATGt > 1:2512128/1‑140 (MQ=255) acaaGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTTGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCAATTAAGCAGAttt > 1:850573/1‑138 (MQ=255) acaaGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGt < 2:3769112/140‑1 (MQ=255) acaaGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGAATATTGGGTATTTAGAAACCATTTCTTAGTTCCAGTCAACCAATTAAGCAGAttt > 2:2254764/1‑138 (MQ=255) aGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGa < 2:796558/76‑1 (MQ=255) cTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGTTTGGGTATTTATAAACCATTTCTTCGTTCCAGTCAACCATTTAAGCAGATGTTTTca > 2:3379086/1‑140 (MQ=255) aaCTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCCATAGAGATCATTGGGTATTTAGAAACCAATTATTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACaa > 2:1091413/1‑140 (MQ=255) cAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCca < 2:1724325/140‑1 (MQ=255) cAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGGCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCca < 2:1219189/140‑1 (MQ=255) aGACGCTCATTAAGTAGCTTGTGTGATTCCCAGTCGTTTTCGTCAAGTCCATGTTCGATAGAGATGATTGGGTATTTAGAAACCATTTATTCGTACCAGTCAACCATTTCAGAAGATGTTTTCACAACGCCTTCGCcaga < 2:416519/140‑1 (MQ=255) aGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCcaga < 2:2061602/140‑1 (MQ=255) gCTCAGTAAGAAGCTTGTGGCCTTGCCAGTCGTTTTCGTCAAGTCCATCTTCTATATAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCcagacaga < 1:3138522/140‑1 (MQ=255) gCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCcagacaga < 2:1486213/140‑1 (MQ=255) gCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCcagacaga < 1:3964927/140‑1 (MQ=255) gCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCcagacaga < 1:2458811/140‑1 (MQ=255) cTCAGTAAGAAGGTTGTGGCCTTCCCAGTCGTGTTCTTCAAGTCCATCTTCGATAGAGATGATTTGGTATTGAGTCACCATTTCTTCTTACCAGTCAACAATTTAAGGCGATGTTTTAACAACGCCTTCGCCAGACAGAt < 2:2556515/140‑1 (MQ=255) cTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCCAGACAGAt < 2:543470/140‑1 (MQ=255) cTCAGTAAGAAGCTTGTGCCCTTCCCAGTCGTGTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCCAGACAGAt < 2:268095/140‑1 (MQ=255) cAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTGCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTTGTAACCATTTCTTCGGAACAGTCCACCATTTCAGCAGAAGTTTTAACAACCCCGTCGCCCGACCGAggg > 1:3342260/1‑140 (MQ=255) tAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTACAAACCATTTATTCGTACCAGTCAACCATTTCACCAGATGTTTTAACAACGCCTTCGCCAGACAGATGGTAt < 1:2598912/140‑1 (MQ=255) agCTTGTGGCCTTCCCCGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCCAGACAGATGGTATTTGcc < 1:1040200/140‑1 (MQ=255) agCGTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCCAGACAGATGGTATTTGcc < 1:3040293/140‑1 (MQ=255) gCTTGTGGCCTTCCCAGTCGTGTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGGATTTAGAAACCATTTCTTCGTGCCAGTCAACCATTTCAGCAGATGTTTTGACAACGCCTTCGCCAGACAGATGGTATTTGGCg > 1:2724212/1‑140 (MQ=255) gtgGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTGTTCGTTCCAGTCAACCATTTCACCAGATGTTTTCACAACGCCTTCGCCAGACAGATGGTATTTGCCGtcgt > 1:3421485/1‑138 (MQ=255) gtgGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCCAGACAGATGGTATTTGCCGtctt > 2:3153686/1‑140 (MQ=255) gtgGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCCAGACAGATGGTATTTGCCGtctt > 2:1348826/1‑140 (MQ=255) gtgGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCAATTCAGCAGATGTTTTAACAAAGCCATCGCCAGACACATGGTATTTGCCGtcat > 2:3177964/1‑138 (MQ=255) gtgGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCGTCGTACCAGTCAACCATTTAAGCAGATGTTTTCACAACGCCTTCGCCAGACAGATGGTATTTGCCGtcgt > 2:1163873/1‑138 (MQ=255) gtgGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCAATTCTTAGTACCAGTCCAACATTTCAGCAGATGTTTTCACAAAGCCTTCGCCAGACCGATGGTATTTTACGtctt > 1:2923412/1‑140 (MQ=255) gtgGCCTTCCCAGTCGTTTTCGTCAAGTCCAACGTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCAATTAAGCAGATGTTTTCACAACCCCATCGCCAGACAGATGGTATTTGCCCtctt > 1:612086/1‑140 (MQ=255) gtgGCCTTCCCAGTCGTTTTCGTCAAGTACATCTTCGATAGAGATGATTGGGTTTTTAGAAACCATTTGTTGGTACCAGTCAACCATTTCATCAGATGTTTTCAAAACGCCTTCGCCACACAGATGGTATTTGCCGtgtt > 1:3827160/1‑140 (MQ=255) gtgGCCTTCCCAGTCGTTTTCGTCAACTCCAACGTCGATATAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCACCAGATGTTTTCACAACGCCTTCGCCAGACAGATGGTATTTGCCGtctt > 2:2815843/1‑140 (MQ=255) gtgGCCTTCCCAGTCGTTTTCGGCAAGTCCATCTTCGATAGAGATTATTGGGGATTTAGAAACCAATTCTTCGTACCAGTCCACCAATTAAGCAGATGTTTTAAAAACCCCGTCGCCCCACACATGGTATTTTCCGtctg > 1:1152059/1‑139 (MQ=255) gtgGCCTTCCCAGTCGTTGTCGTCCAGTCCATCTTCGTTAGTGTTTATTGGGGATTTAGAAACCATTTCGTCGTACCAGTCAACCAGTTCAGCAGATGTTTTCACAACGCCTTCGCCAGACAGATGGTATTTGCCggcgg > 1:2797308/1‑136 (MQ=255) gtgGCCTTCCCAGTCGTGTTCGTCAAGTCCATCTTCGATAGATATTATTGGGTATTTAGAAACCATTTATTAGTACCAGTCAACCATTTCAGCAGATGTTTTAAAAACGCCTTCGCCAGACAGATGGTATTTTGCGtcgt > 1:506954/1‑138 (MQ=255) ggCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCCAGACAGATGGTATTTGCCGtcttct < 2:95430/140‑1 (MQ=255) ggCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCCAGACAGATGGTATTTGCCGtcttct < 1:1109949/140‑1 (MQ=255) ggCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCCAGACAGATGGTATTTGCCGtcttct < 2:1112362/140‑1 (MQ=255) gCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCCAGACAGATGGTATTTGCCGTcttctt < 1:3684676/140‑1 (MQ=255) gCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCCAGACAGATGGTATTTGCCGTcttctt < 2:862270/140‑1 (MQ=255) gCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCCAGACAGATGGTATTTGCCGTcttctt < 2:1736812/140‑1 (MQ=255) gCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCCAGACAGATGGTATTTGCCGTcttctt < 1:3246211/140‑1 (MQ=255) gCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCCAGACAGATGGTATTTGCCGTcttctt < 2:3226744/140‑1 (MQ=255) cTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCCAGACAGATGGTATTTGCCGTCTTCTttg < 2:3252508/140‑1 (MQ=255) ttCCCAGTCGTGTTCGTCAAGTCCAACTTCGATAGAGATGATTGGGTCTTTAGAAACCATTTCTTCGTACCAGTCAAACAATTAAGCACATTGTTTCACAAAGCCATCGCCAGACAGATGGTATTTGCCGTCGTCTgtgt > 2:703915/1‑140 (MQ=255) tCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTATTAACCATTTAGTCGTACCAGTCAACCATTTCAGCACATGTTTTCACAACGCCGTCGCCCGACACATGGGATTTTCCGTCTTCTttgtt > 2:2529929/1‑140 (MQ=255) cAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCCAGACAGATGGTATTTGCCGTCTTCTTTGTTGTa < 1:1353681/140‑1 (MQ=255) aGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCCAGACAGATGGTATTTGCCGTCTTCTTTGTTGTAg < 1:397221/140‑1 (MQ=255) aGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCCAGACAGATGGTATTTGCCGTCTTCTTTGTTGTAg < 1:3203679/140‑1 (MQ=255) ttCGTCAAGTCCATCTTCGATAGAGATTATTTGCTATTTAGAAACCATTTCTTAGTACCAGTCAACCATTTCAGCAGATGTTTTAAAAAAGCCATCGCCACACAGATGGTATTTGCCGTCTTCTTTGTTGTAGaaaacag > 2:343042/1‑135 (MQ=255) ttCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATTTTTTCACAACCCCTTCGCCAGACAGATGGTATTTGCCGTCTTCTTTGTTGTAGAACTCag > 2:1017389/1‑140 (MQ=255) ttCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCGTCGCCAGACAGATGGTATTTGCCGTCTTCTTTTTTGTAGAACTCag > 2:3712850/1‑140 (MQ=255) ttCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTAAGCACATGTTTTCACAACGCCTTCGCCAGACAGATGGTATTTGCCGTCTTCTTTGTTGTAGAACtaat > 2:2428213/1‑137 (MQ=255) ttCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTAGTACCACTCAACCATTTCAGCAGATGTTTTAACAACGCCTTCGCCAGACAGATGGTATTTTCCGTCTTCTTTGTTGTAGAACTCag > 2:1301876/1‑140 (MQ=255) tCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCCAGACAGATGGTATTTGCCGTCTTCTTTGTTGTAGAACTCaga < 2:390417/140‑1 (MQ=255) tCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCCAGACAGATGGTATTTGCCGTCTTCTTTGTTGTAGAACTCAGAAGATGCAGCATc > 2:1849815/1‑140 (MQ=255) | TGCCTACGCCGTTTTTGATACCTTCAGCAAGTTTTTTCGTGTTTGTAACGAAGAGGTCATCACCAACAAGCTGAACTTTTTTGCCAAGACGCTCAGTAAGAAGCTTGTGGCCTTCCCAGTCGTTTTCGTCAAGTCCATCTTCGATAGAGATGATTGGGTATTTAGAAACCATTTCTTCGTACCAGTCAACCATTTCAGCAGATGTTTTCACAACGCCTTCGCCAGACAGATGGTATTTGCCGTCTTCTTTGTTGTAGAACTCAGAAGATGCAGCATC > NZ_CP034943/3294770‑3295046 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |