| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,996,857 | C→A | 8.6% | intergenic (‑163/+43) | purA ← / ← EO946_RS20530 | adenylosuccinate synthase/VOC family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,996,857 | 0 | C | A | 8.6% | 418.4 / 8.1 | 163 | intergenic (‑163/+43) | purA/EO946_RS20530 | adenylosuccinate synthase/VOC family protein |
| Reads supporting (aligned to +/- strand): ref base C (82/62); new base A (2/17); total (84/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.28e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 175 total aligned reads displayed.
TCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACGGGTTCT > NZ_CP034943/3996718‑3996994 | tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTACATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTAATAGCATTCTcc > 2:3018041/1‑140 (MQ=255)tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAATCGTTTTCTCATCGCATTGTcc > 1:1162206/1‑140 (MQ=255)tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAATCGTTTTCTCATCGCATTGTcc > 2:803125/1‑140 (MQ=255)tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 2:647868/1‑140 (MQ=255)tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 2:3433989/1‑140 (MQ=255)tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 1:372794/1‑140 (MQ=255)tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 1:1246256/1‑140 (MQ=255)tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAAAAGAAAGTCAATTGTAAATACGAACAATAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTAAAATCGTTTTCTCATCGCATTGTcc > 1:2520943/1‑140 (MQ=255) gATTCTATTCAAACATATCAAGTTTATCAGTGAATAAACAGAAAGTCAATTGTAAATCCCCACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTAGAAGCTTTTTCTCATCGCATTGTCCTAAAAAg < 2:4014391/140‑1 (MQ=255) gATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAg > 1:407190/1‑140 (MQ=255) gATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAg < 2:1542169/140‑1 (MQ=255) ttCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGAGTTTTCTCATCGCATTGTGCTAAAAAGCt > 2:3115727/1‑140 (MQ=255) tttaaacaaaTCAAGTTTATCAGTGAAGTAACAGAAAGTCTATTGTAAATCCGATAATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 1:3651619/137‑1 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 1:326646/140‑1 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 1:3987684/140‑1 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 2:527012/140‑1 (MQ=255) acaaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTGGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACtt > 2:4018248/1‑140 (MQ=255) acaaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAATCGTTTTCTCATCGCAGTGTCCTAAAAAGCTCGTGAAACtt > 1:2040409/1‑140 (MQ=255) acaaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACtt > 1:2456505/1‑140 (MQ=255) aaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTa > 2:1711809/1‑140 (MQ=255) tATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGc > 2:434781/1‑140 (MQ=255) aTCGGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCa < 1:1726890/140‑1 (MQ=255) aTCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCa < 1:711641/140‑1 (MQ=255) cAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACg < 2:3414807/140‑1 (MQ=255) gTGAAGAAACAGACAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCTTTTTCTCATCGCATTGTCCTAAAAACCTCGTGAAACTTTTATCCTTTTGCACGaa < 2:825877/140‑1 (MQ=255) gaagaaACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCTTGAAACTTTTATCATTTAGCACGaaaa > 1:3548652/1‑140 (MQ=255) gaagaaACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGaaaa > 1:2774330/1‑140 (MQ=255) agaaACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAag < 2:774873/140‑1 (MQ=255) agaaACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAag < 2:372794/140‑1 (MQ=255) taaaGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACATTTATCCTTTAGCACGAAAAAGAGTTACt < 2:2360886/139‑1 (MQ=255) gAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAATCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACt > 1:3231935/1‑140 (MQ=255) gAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACt > 1:1495484/1‑140 (MQ=255) gAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACt < 2:2463221/140‑1 (MQ=255) aaaGTCAATTGTAAATCCGAACATTAAATTACTGTAACCCAATATTCGTTCGCTTCCATTCGATTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACtt < 2:1662452/140‑1 (MQ=255) aaaGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACtt < 2:185371/140‑1 (MQ=255) aaTTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGa < 2:417112/140‑1 (MQ=255) ttGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGata < 1:1330784/140‑1 (MQ=255) ttGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGata > 2:3465090/1‑140 (MQ=255) ttGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGata < 2:563071/140‑1 (MQ=255) ttGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGata < 2:3985300/140‑1 (MQ=255) ttGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGata > 1:3829843/1‑140 (MQ=255) ttGTAAATCCGAACATTAAATTAATGTAAATCAATATACGTTCGCTTCCAATCGTTTTACAAGCGTTTTCTCATCGCATGGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGGTACTTGCCTGaga > 1:3994986/1‑138 (MQ=255) ttGTAAATCCGAACAGTAAATTAATGTAAATCCAGATTCGTTCGCTTCCACTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAACAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGata < 1:2341256/140‑1 (MQ=255) tGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGatat < 1:2440328/140‑1 (MQ=255) tGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGatat < 1:2030915/140‑1 (MQ=255) tAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATcc < 2:254792/140‑1 (MQ=255) gAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGt > 1:1996951/1‑140 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTa > 1:1248479/1‑140 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTa > 1:2829852/1‑140 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTa > 2:1527203/1‑140 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTa < 1:1117798/140‑1 (MQ=255) attttAATTCATTTTTCGTTCGCTACCATTGTTTTTAAAAGGTTTTTGTAATCGCTTTTTCCTAAAAAGCTCTTGAAACTTTTATCCTTTAGAACGAAAAAGTTTTACTTGCCTGATATCCCTTTTGTATTCATAAAAAc < 2:2736340/136‑1 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGa > 2:869704/1‑140 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGa > 1:1925613/1‑140 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGa > 2:1767400/1‑140 (MQ=255) aaTCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCg > 1:1435770/1‑140 (MQ=255) aTCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGc > 2:1420394/1‑140 (MQ=255) aTCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGc > 2:200269/1‑140 (MQ=255) tCACTATGCGTGCGCTTCCATTCGTTTTACAAGCGTTTTCTATTCGCATTGTACTAAAAAGCTCGTCAAACTTTTATCCTTTAGCCCGAAAAAGAGTTACTTGCCTGATATCCCTTTGGTATTAATAAAAACGACTCGcc < 2:3183156/140‑1 (MQ=255) tatTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAAcc > 1:10575/1‑140 (MQ=255) tatTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCACTTTTTTATTCATAAAAACGACTCGCCAAcc > 2:2990047/1‑140 (MQ=255) cgttcgCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACTAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCTTTACAACGACTCGCCATCCGTcc > 2:2053905/1‑140 (MQ=255) cgttcgCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGACAAACGTcc > 2:1847627/1‑140 (MQ=255) ttcgTTTCCATTGTTTTTAAAAGCGTTTGCACATCGCTTGTTCATAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGTGTTACTTGCCTGATATCCCTTTTGTATTAATAAAAACGACTCGCCAACCGTCCgg < 2:3659412/140‑1 (MQ=255) ttcgGTTCAATTCGTTTTACATGCGTTTTCTCAACGATTTGTCCTAAAAAGCTGGTGAAACTTTTATCCTTTAGCACCAAAAAGAGTTAGTGGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCgg < 2:1607064/140‑1 (MQ=255) ttcgCTTCCATTCTTTTTAAAAGCTTTTTCTCATCGAATTGTCCAAAAAACCTCGTGAAACTTTTATCCTTTAGCACTAAAAATAGTTACTGGCCTGATATCCCTTTTGTATTCAAAAAAACGACTCGCCAACCGTCCgg < 2:1089634/140‑1 (MQ=255) ttcgCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCgg > 1:701549/1‑140 (MQ=255) ttcgCTTCCATTCGTTTAACAAGCTTTTTCTCATCGAATTGTCATAAAAAGATCTTTAAATTTTTATCCTTTCGCACGAAAATGAGTTACTTGCGTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCgg < 2:3103274/140‑1 (MQ=255) tgcgCTTCCTTTCGTTTTACAAGCTTTTTCTCATCGCATTGTCCTAAAAAGCTGGTTAAACTTTTATCCTTTAGCACCAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCgg < 2:2830554/138‑1 (MQ=255) tcgCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGata < 1:871943/99‑1 (MQ=255) tcgCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGa > 1:1089634/1‑140 (MQ=255) tcgCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGa > 1:3900704/1‑140 (MQ=255) cgCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGAt > 1:529649/1‑140 (MQ=255) cgCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGAt > 2:352995/1‑140 (MQ=255) gCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATc > 2:162487/1‑140 (MQ=255) cTTCCATTCGTTTTACAAGCGTTTTCTCCTGGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCGTTTAGCTCGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTAGGCATAAACACGTGTCGCCAACCGTCCGGATcc > 1:2848016/1‑140 (MQ=255) cTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATcc > 1:928152/1‑140 (MQ=255) cTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATcc > 2:3356019/1‑140 (MQ=255) caaTTGGTTTTACAAGCGTTTGCCCTTCGAATTGTCCTAAAACGCTCGTGAAACTTTTATCCTTTCGCACTAAAAATAGTTCGTTGCCTGATATCCCTTTTGTATTCATAAACACGACTCGCCAACCGTCCGGATCctct < 2:3241594/138‑1 (MQ=255) aTTCTTTTTAAAAGGGTTTTCTCATCGAATTGTCCTAAAAAGCTCGTGAAACTTTTATCATTTAGCCCGAAAAAGTGTTACTTGCCTGATATCCCTTTTGTATTAATAAAAACGACTCGCCAACCGTCCGGATCCTCTAt < 2:468934/140‑1 (MQ=255) tttACAAGCGTTTTCTCATCGCATTGTCCTCAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAACAAGAGTTACTTGCCTGATATCCCTTTTGTATTCACTACAAAGACTCGCCAACCGTCCGGATCCGCTTTCGGCAc > 2:2327481/1‑140 (MQ=255) tttACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTGTTATCCTTTAGCACGACAAAGAGTTACTTGCCTGATATCCCTGTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCAc > 2:887350/1‑140 (MQ=255) ggTTTTCTCATCTATTTGTCAAAAAAACCTCTTGAAAATTTTAACCTTTAGAACTAAAAATAGTTACTTGCCTGATATCCATTTTGTATGAAAAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCAt < 2:1495484/139‑1 (MQ=255) ctttttCTAATCTCTTTGTCATAAAAAGATCTTTAAAATTTTATCCTTTAGCACTAAAAAGTGTTAGTTGCATGATATCCCTTTTGTATTAATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCAt < 2:2435892/138‑1 (MQ=255) cGTTTTCTCATCTCTTTGTCCTAAAAAGCGCGTCAAAATTTTATCCTTTAGCACTAAAAAGAGTTACTTGCCTGATAGCCCTTTTGTATTCAAAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCAt < 2:1330583/140‑1 (MQ=255) cGTTTTCTCATCGCATTGTCATAAAAAGCTGGTTAACATTTTATCCTTTAGCCCCAAAATGTGTTTCTTGCCTGATATCCCTTTTTTTTTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCAt < 2:661471/140‑1 (MQ=255) cGTTTTCAAATCGAATTGTCCTAACACGCTCGTGAAACTTTTCACCTTTACCACGAAAAAGAGTTACTTGCCTGATAACCCTTTTGTATTCAAAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCAt < 1:968957/140‑1 (MQ=255) cGTTTTAACATCGCTTTGTCCTAAAACGCTCGTTAAACTTTTATCCTTTCGCACCAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCAt < 2:1404224/140‑1 (MQ=255) ttttCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTGTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATgg > 2:1176360/1‑140 (MQ=255) ttttCTCATCGAATTTTCATAAAAAGCTCTTTAAATTTTTATCCTTTAGAACGAAAAATTGTTAGTTGCATGATATCCATTTTGTTTTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATgg < 2:3231935/140‑1 (MQ=255) tttCTCTTCGATTTTTCATAAAAAGCTCGTTAAATTTTTATCATTTAGAACTAAAAAGAGTTAGTTGCGTTATTTCCGTTTTTTTTTAATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGc < 1:3115727/140‑1 (MQ=255) tttCTCATCGCTTTGTCATAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTAATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGc < 2:2752767/140‑1 (MQ=255) ttgctcAGCGCAGTGTCCTACACACGTCGTGAAACTTTTAGCCTTTCGCACGAAAACGCGTTAGGTCCCTTATCTCCCTTGTGTATAAATAAACACGACTCGCCAACCCTCCGGATCCTCTATCGTCACGCCTCCAGGGc < 1:3973511/137‑1 (MQ=255) tCGCTTTGTCCTAAAAAGCTGGTCAAACTTTTATCCTTTACCACTAAAAAGTGTTAGTTGCCTTATATCCCTTTTGTATTAAAAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTa < 1:844462/140‑1 (MQ=255) tCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTa > 2:143260/1‑140 (MQ=255) cGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTAc > 2:3835585/1‑140 (MQ=255) cGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTAc > 1:3033044/1‑140 (MQ=255) cGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTAc > 2:3629014/1‑140 (MQ=255) cGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTAATAAAAACGACTCGCCAAACGTCCGGATACTCTATCGTCACTCCTCAAAGCCTCCAGTAc > 2:960766/1‑140 (MQ=255) tCCAAAAACGCGCGTGAAATTTTTATCCTTTCCCACCAAAATGAGTTACTTGCCTTATATCCCTTTTGTATTCAAAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACGGGTtct < 1:1526438/140‑1 (MQ=255) | TCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACGGGTTCT > NZ_CP034943/3996718‑3996994 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |