BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NZ_CP034943	607,592	A→C	5.9%	E145D (GAA→GAC)	EO946_RS03185 →	collagen‑like protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP034943	607,592	0	A	C	5.9%	319.8 / 2.3	137	E145D (GAA→GAC)	EO946_RS03185	collagen‑like protein
Reads supporting (aligned to +/- strand): ref base A (67/56); new base C (9/4); total (76/61)
Fisher's exact test for biased strand distribution p-value = 3.86e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 141 total aligned reads displayed.

ACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACC  >  NZ_CP034943/607454‑607730

 ccAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGc                                                                                                                                          <  1:1637385/140‑1 (MQ=255)

     ccGGAGCGACAGGAGCGACAGGGGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGCGAGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTCCTGGGGAAGCCGGa                                                                                                                                      >  1:2888133/1‑140 (MQ=255)

     ccGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGGCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCCCCGGGAGCCACAGGGGCTGCGGGGGACGACGGa                                                                                                                                      >  2:1738283/1‑140 (MQ=18)

     ccGGAGCGACAGGAGCGACAGGAGCGACAGGAGCATCCGGCGAAGCTGGACCAGCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGa                                                                                                                                      <  2:3997077/140‑1 (MQ=255)

         agcgacaggagcgacaggagcgacaggAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAg                                                                                                                                  >  1:3008840/1‑140 (MQ=255)

             ccccgagcgccaggagcgccaggaccAACCGGCGAAGCAGCACCAGCTGGAGCGACGGGAGCGACAGCAGCTACCGGGCACCCCGGACCAGCCGGGGCCACGGGACCCACAGGGGATACTGGGGAAGCCGGACCAGCCgg                                                                                                                              <  1:157167/136‑1 (MQ=21)

             acaggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCgg                                                                                                                              <  1:2412507/140‑1 (MQ=255)

                   gcgacaggagcgacaggagcTACCGGGGACGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                                                        <  2:1228949/140‑1 (MQ=255)

                      acaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACCGGAGCTCCCGGGGAAGACGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTCCGGGGGCAGCCGGACCCCCCGGAGCGACAgg                                                                                                                     >  2:3709290/1‑140 (MQ=21)

                      acaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGTCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                                                     >  1:2819085/1‑140 (MQ=255)

                      acaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                                                     >  1:1636533/1‑140 (MQ=255)

                       caggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGa                                                                                                                    <  2:3124719/140‑1 (MQ=255)

                        acgagcgccaggcgcTCCCGGGGAAGCAGGACCCCCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAg                                                                                                                   <  1:2264644/138‑1 (MQ=18)

                           agctcaaggagcTACCGGCGCAGCTGGACGCGCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACCGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                                                                                <  1:2320793/134‑1 (MQ=18)

                           agcgacaggagcTCCCGGGGAAGCTGGACCAGCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                                                                                <  2:3693106/140‑1 (MQ=255)

                             cgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTCCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTAcc                                                                                                              >  1:1430455/1‑140 (MQ=255)

                             cgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTGcc                                                                                                              >  1:678109/1‑140 (MQ=255)

                               acaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCCGCCGGGGCCACGGGAGCGACAGGGGCTACTGGGGAAGCCGGACCCGCCGGCGCGACAGGAGCTACCgg                                                                                                            >  1:73117/1‑140 (MQ=255)

                                     gcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAg                                                                                                                   <  1:173885/127‑1 (MQ=255)

                                        aCCGGCGCAGCCGGACCCGCCGGAGCGACGGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCgg                                                                                                   <  2:1823230/140‑1 (MQ=17)

                                          cGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACGGGAGCCACAGGGGCTACGGGGGAAGCCGGACGAGCCGGAGCGACCGGTGGGACCGGGGAAGCCGGag                                                                                                 >  2:1683957/1‑139 (MQ=18)

                                          cGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCAAGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTCCCGGGGAAGCCGGAc                                                                                                 >  2:695917/1‑140 (MQ=255)

                                             ggAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACCGGGGCGACTGGGGAAGCCGCACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCggggcgg                                                                                              >  2:1041743/1‑135 (MQ=18)

                                             ggAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAg                                                                                              >  1:768044/1‑140 (MQ=255)

                                             ggAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACCGGAGCCACAGGGGCTACAGGGCAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGCGAAGCCGGAcccg                                                                                              >  2:2153179/1‑138 (MQ=18)

                                             ggAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGCGCCACGGGAGCCACAGGGGCTACTGGGGACGCCGGACCAGCAGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAg                                                                                              >  1:737555/1‑140 (MQ=255)

                                             ggAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGCGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGCGAAGCCGGACCaa                                                                                              >  2:428590/1‑139 (MQ=255)

                                             ggAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGCTTAAACACCACAACCCGCCCCCAAGGGAGCCACACCGGCTGGTTGCGAAGCCGGACCTGCCGCAGCGACAGGAGCTCCCGGGGACGCCGGAccgg                                                                                              >  1:1279644/1‑138 (MQ=12)

                                             ggAAGCGGGACCAGCGGGAGCGACGGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGGTCCTACGGAGGCACAGGGGATAAGGGGCACGCCGGAGCAGCAGGAGAGACGGGAGGTCCCGGGGAAGACGGAGCat                                                                                              >  2:1879314/1‑139 (MQ=12)

                                              gccccgggACCAGCCGCAGCGACGGGAGCCACCGGCGCGACCGGGGAAGCCGCACCAGCCGGCGCCACGGGAGCCTCAGGGGCTTCTGGTGAAGCCGGACCTGCGGGAGCGACTGGAGCTACCGGGGAAGCCGGACCAGc                                                                                             <  2:3545319/134‑1 (MQ=17)

                                              gAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGc                                                                                             >  2:3222806/1‑140 (MQ=255)

                                              gAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCaac                                                                                             >  2:152452/1‑138 (MQ=11)

                                              gAAGCTGGACCAGCGGGAGCGACGGGAGCGACAGGAGCGACCGGGGAAGCCGGACCTGCCGGAGCCACGGCAGCCACTGGCTCTCGCGCGGCACCCGGACCGACCGGAGCGACAGGAGATCCGGGGTACGGCGGACCAGc                                                                                             >  2:247396/1‑140 (MQ=9)

                                               aaGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGTCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                                                            <  2:2819085/140‑1 (MQ=255)

                                                 gcgggACCAGCTGGAGCGACGGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCTCAGGGGCTACTGGGGAAGCCGGACCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                                                                          <  2:817961/137‑1 (MQ=255)

                                                 ccggctgcAGCGGGAGCCACGGGAGCGCCCGGAGCTACCGGGGAAGCCGGACCAGCCGGCGCCACGGGAGCCACAGGGGCTACTGGGGACGACGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCgg                                                                                          <  2:1530518/133‑1 (MQ=11)

                                                  ccggcccAGCCGGCGCGACGGGAGCGCCAGGAGCCACCGGGGACGCCGGACCAGCCGGCGCCACGGGCGCCAGTGGGGCATGTGGGGTTGCCGGACCAGGCGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGa                                                                                         <  1:26082/135‑1 (MQ=14)

                                                   tGGACCAGCTGGAGCGACGGGAGCGCCAGTAGCTAGCGGTGAAGCCGGACCAGCGGGTGCGACGGGTGCCACAGGTGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAg                                                                                        <  2:2888133/140‑1 (MQ=17)

                                                       cccccgcgagcgccgGGCGCGACAGGAGCTCCCGGGGCCGCCGGCCCAGCGGGCGACACGGGAGCCACCGGGGCTACTGGGGAAGCCGGACCTGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGac                                                                                    <  2:387894‑M1/133‑3 (MQ=255)

                                                       ccAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACGGGGGAAGCCGGACCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGac                                                                                    <  2:2372539‑M1/140‑3 (MQ=255)

                                                         aGCTGGAGCGACGGGAGCGACAGGAGCTCCCGGTGAAGCCGGACCCGCGGGGGCAACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAg                                                                                  <  1:1952093/140‑1 (MQ=17)

                                                          tcTGGAGCGACGGGAGCTCCCGGAGCTCCCGCAGAACCCGGACCACCCGGCGCCACGGGAGCCACAGGCGCTACTGGGGAAGCGGGACCCCCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                 <  1:1419587/139‑1 (MQ=17)

                                                          gccgcaGCGCCGGGCGCGACAGCAGCTACCGGCGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                 <  1:3206695/135‑1 (MQ=17)

                                                          gCTGGAGCGACGGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCAGCCGGGGCGACGGGAGCCACTGGGGCTAGTGGGTAAGCCGGACCAGCCGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                 <  1:1070901/140‑1 (MQ=17)

                                                          gCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCAGGAGCGACAgg                                                                                 <  1:2064359/140‑1 (MQ=255)

                                                          gCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGCGGCCACGGGAGCCACAGGGGCTCCTGGCGAAGCCGGACCAGCGGGAGCGCCAGGAGCTCCGGGGGATGACGGTCCAGCCGGAGCGCCAgg                                                                                 >  2:2428006/1‑140 (MQ=17)

                                                          ccgggcgCGACGGGAGCGACAGGAGCTACCGGCGCCCCCGGACCACCCGGGGCCACGGGAGCCCCAGGGGCAACGGGGGACGCGGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                 <  1:3867920/134‑1 (MQ=14)

                                                           cTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCCGCCGGAGCGACAGGa                                                                                >  1:3732414/1‑140 (MQ=255)

                                                               cgcttcGGGAGCCCCAGGAGCTACCGGGGCAGCCGGAGCAGCGGGCGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                                            <  1:2040701/135‑1 (MQ=14)

                                                               aGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCCCCGGAGCCACAGGGGCTACTGGGGAAGACGGACCAGCCGGACCGACAGGAGCTACCGGGGAAGCCGGACCCGGCGGCGCGACACGAGCtc                                                                            >  1:2153997/1‑139 (MQ=17)

                                                               aGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                                            >  1:532091/1‑140 (MQ=255)

                                                               aGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                                            <  1:2467888/140‑1 (MQ=255)

                                                               aGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTa                                                                            >  1:459913/1‑140 (MQ=255)

                                                                   aCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGTGCCACGGGAGCGACAGGGGCTACTCGTGACGCCGGACCAGCCGGAGCGCCAGGAGCAACCTGGGACGCCGGACCAGCCGGAGCGACAGGAGcgcgcgg                                                                        >  1:3778292/1‑134 (MQ=14)

                                                                   aCGGGAGCGACAGGAGCTACCGGAGAAGCCGGACCAGCCGGAGCGACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTCCCgg                                                                        >  1:3687773/1‑140 (MQ=14)

                                                                    cGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGCCGGGAGCCACAGGGGCGTCGCGGCAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACTGGAGCGACCggg                                                                       >  2:1932502/1‑140 (MQ=14)

                                                                    cGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACCGGGGCGACTGGGGAAGGCGGACCAGCGGGAGCGACCGGAGCTACGGGGGACGCCGGACCAGCCGGTGCGacgggagcgcccggg                                                                       >  1:2940155‑M1/1‑125 (MQ=255)

                                                                    cGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAg                                                                                                                            >  1:2789323/1‑87 (MQ=255)

                                                                    cGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAg                                                                                                                            <  2:2789323/87‑1 (MQ=255)

                                                                    cGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGc                                                                                                                  >  2:729143/1‑97 (MQ=255)

                                                                    cGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGATACCggg                                                                       >  1:100359/1‑140 (MQ=255)

                                                                        aGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                   <  1:835147/140‑1 (MQ=255)

                                                                          cGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGcc                                                                 <  2:1430455/140‑1 (MQ=255)

                                                                                     cccGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACCGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCgg                                                      <  1:1269749/139‑1 (MQ=255)

                                                                                     aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCGACCGGGGAAGCCGGCCCacacgg                                                      >  1:666187/1‑135 (MQ=17)

                                                                                     aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCgg                                                      >  1:3663399/1‑140 (MQ=255)

                                                                                     aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCAGGACCAGCCGGAGCGCCAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGCCAGGAGCTACCGGGGAAGCCGGACCAACCgg                                                      >  1:210688/1‑140 (MQ=255)

                                                                                          ggAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACGGGGGAAGCCGGACCACCCGGAGCGACAGGAGCACCCGGGGCCGCCGGACCAGCCGCAGCgc                                                 >  1:2269185/1‑139 (MQ=17)

                                                                                           gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                                                                                <  1:3547509/76‑1 (MQ=255)

                                                                                           gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                                                                                >  2:3547509/1‑76 (MQ=255)

                                                                                           gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                                <  1:361856/140‑1 (MQ=255)

                                                                                           gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                                <  1:1153347/140‑1 (MQ=255)

                                                                                              gCCGGACCAGCCGGGGCCCCGGGCGCCTCAGGGGCTACTGGCGAAGCCGGACCAGCCGGAGCCACAGGAGCTCCCGGCGAAGCCGGACCAGCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAgg                                             <  1:1034162/140‑1 (MQ=17)

                                                                                                cGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAg                                           >  1:349043/1‑140 (MQ=255)

                                                                                                cGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCCACCGGAGCGACAGGAg                                           >  1:1662616/1‑140 (MQ=255)

                                                                                                        ccGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACggga                                   >  2:1123606/1‑139 (MQ=255)

                                                                                                        ccGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGCAGCCGGGCCTAGCGGAGCGACAGGAGCTACCggg                                   >  1:1586292/1‑140 (MQ=17)

                                                                                                        ccGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCAGGAGCGACAGGAGCGACAGGGGAAGCCGGACCAACCGGAGCGCCAGGAGCAAcagcg                                   >  1:3392722/1‑136 (MQ=17)

                                                                                                                 cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAg                                                                                                                            >  1:3317676/1‑42 (MQ=255)

                                                                                                                 cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGACGCCGGa                          >  1:924502/1‑140 (MQ=255)

                                                                                                                 cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCggg                                   <  2:885984/131‑1 (MQ=255)

                                                                                                                 cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCggg                                   >  1:885984/1‑131 (MQ=255)

                                                                                                                 cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                          >  2:1273872/1‑140 (MQ=255)

                                                                                                                 cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                          <  1:2578010/140‑1 (MQ=255)

                                                                                                                 cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGATCGGGGACTCCGGACCAACCGGAGCTACAGGAGCAAACGGGGATGCGGGa                          >  1:622025/1‑140 (MQ=14)

                                                                                                                      gCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGc                     <  2:1636533/140‑1 (MQ=255)

                                                                                                                       ccACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGa                                            >  1:2772481/1‑116 (MQ=255)

                                                                                                                       ccACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGa                                            <  2:2772481/116‑1 (MQ=255)

                                                                                                                           aGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAg                <  2:2245395/140‑1 (MQ=255)

                                                                                                                              ggCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGCGAAGCCGGACCAGCCGGAGCGa             >  1:2069504/1‑140 (MQ=255)

                                                                                                                               gCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGCGAGCCCGGACCAGCCGGAGctcc            >  2:3950316/1‑137 (MQ=14)

                                                                                                                                 caCTGCGGACGCCGGACCCGCCGGCGCCACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAg          <  1:2669656/139‑1 (MQ=14)

                                                                                                                                  ccgggggAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAACCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCTGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg         <  1:3939354/137‑1 (MQ=255)

                                                                                                                                  aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGCAGCCGGACCAACCGGAGCGACCGGAGCGCCCGGGGCAGCCGGACAAACCGGAGCgcccgg         >  2:609040/1‑135 (MQ=11)

                                                                                                                                  aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCAACCGGCGAAGCCGGACCAGCCGGAGCTACCGGAGCGACCGGCGCGCCCGGAGCAGCCGGAgacgcagc         >  2:3471282/1‑133 (MQ=11)

                                                                                                                                  aCTGGGGAAGCCGGACCAGCCGGAGCGACACGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGTCCGGAGCTCCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg         <  1:3939355/140‑1 (MQ=255)

                                                                                                                                    cggcccaGCCGGACCCCCCGGACCGACAGGAGCTACCGGGCACGCCGGACCAGCGGGAGCGACAGGCGCTCCCGGGGACGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAg       <  2:644663/134‑1 (MQ=14)

                                                                                                                                        gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGAGACGCAGGAACAACCGCAGCGACATGAGCTACAGGGGACTCAGGACCAGCCGGAGCGCCAGGAGCTAc   >  1:2773157/1‑140 (MQ=14)

                                                                                                                                         aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGGCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGTAGCTCAAGGGGAAGCCGGACCAGCCGGAGCGACACGAGCTccc  >  1:344714/1‑140 (MQ=14)

                                                                                                                                         aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGAGCGACTGGAGCGAcc  >  1:803072/1‑140 (MQ=255)

ACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACC  >  NZ_CP034943/607454‑607730

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`