New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	607179 =	239 (1.750)	7 (0.050)	3/254	7.9	4.0%	coding (22/1125 nt)	EO946_RS03185	collagen‑like protein
	?	NZ_CP034943	= 607466	114 (0.890)					coding (309/1125 nt)	EO946_RS03185	collagen‑like protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGTCGCTCCCGTCGCTCCGGCTGGTCCAGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGCTGGTCCGGCTGGTCCAGCTTCCCCAGTAGCTCCCGTGGCTCCTGTCGCCCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NZ_CP034943/607325‑607179 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcctgtCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCTGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGTAGCT  <  NZ_CP034943/607466‑607328                                                                                                                                                                                                                                                                                                TGTCGCTCCCGTCGCTCCGGCTGGTCCCGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGCTGGTCCGGCTGGTCCAGCTTCCCCAGTAGCTCCCGTGGCTCCTGTCGCCCCGGCTGGTCCGGCTTCCCCGGTAG                                                                                                                                                    <  2:46118/140‑1 TGTCGCTCCCGTCGCTCCGGCTGGTCCAGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGCTGGTCCGGCTGGTCCAGCTTCCCCAGTAGCTCCCGTGGCTCCTGTCGCCCCGGCTGGTCCGGCTTCCCCGGTAG                                                                                                                                                    <  2:1416553/140‑1 TGTCGCTCCCGTCGCTCCGGCTGGTCCAGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGCTGGTCCGGCTGGTCCAGCTTCCCCAGTAGCTCCCGTGGCTCCTGTCGCCCCGGCTGGTCCGGCTTCCCCGGTAG                                                                                                                                                    <  2:115945/140‑1  GTCGCTCCCGTCGCTCCGGCTGGTCCCGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGCTGGTCCGGCTGGTCCAGCTTCCCCAGTAGCTCCCGTGGCTCCTGTCGCCCCGGCTGGTCCGGCTTCCCCGGTAGC                                                                                                                                                   >  2:1339901/1‑140  GTCGCTCCCGTCGCTCCGGCTGGTCCAGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGCTGGTCCGGCTGGTCCAGCTTCCCCAGTAGCTCCCGTGGCTCATGTCGCCCCGGCTGGTCCGGCTTCCCCGGTAGC                                                                                                                                                   >  2:273607/1‑140      CTCCCGTCGCTCCGGCTGGTCCAGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGCTGGTCCGGCTGGTCCAGCTTCCCCAGTAGCTCCCGTGGCTCCTGTCGCCCCGGCTGGTCCGGCTTCCCCGGTAGCTCCT                                                                                                                                               >  2:545054/1‑140       TCCCGTCGCTCCGGCTGGTCCAGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGCTGGTCCGGCTGGTCCAGCTTCCCCAGTAGCTCCCGTGGCTCCTGTCGCCCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTG                                                                                                                                              >  1:1101083/1‑140        CCCGTCGCTCCGGCTGGTCCAGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGCTGGTCCGGCTGGTCCAGCTTCCCCAGTAGCTCCCGTGGCTCCTGTCGCCCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGT                                                                                                                                             >  2:1280892/1‑140        CCCGTCGCTCCGGCTGGTCCAGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGCTGGTCCGGCTGGTCCAGCTTCCCCAGTAGCTCCCGTGGCTCCTGTCGCCCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGT                                                                                                                                             >  2:514516/1‑140        CCCGTCGCTCCGGCTGGTCCAGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGCTGGTCCGGCTGGTCCAGCTTCCCCAGTAGCTCCCGTGGCTCCTGTCGCCCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGT                                                                                                                                             >  2:1472309/1‑140        CCCGTCGCTCCGGCTGGTCCAGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGCTGGTCCGGCTGGTCCAGCTTCCCCAGTAGCTCCCGTGGCTCCTGTCGCCCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGT                                                                                                                                             >  1:778549/1‑140        CCCGTCGCTCCGGCTGGTCCAGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGCTGGTCCGGCTGGTCCAGCTTCCCCAGTAGCTCCCGTGGCTCCTGTCGCCCCGGCTGGTCCGGCTTCCCCGGTAG                                                                                                                                                    >  2:1530006/1‑133        CCCGTCGCTCCGGCTGGTCCAGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGCTGGTCCGGCTGGTCCAGCTTCCCCAGTAGCTCCCGTGGCTCCTGTCGCCCCGGCTGGTCCGGCTTCCCCGGTAG                                                                                                                                                    <  1:1530006/133‑1        CCCGTCGCTCCGGCTGGTCCAGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGCTGGTCCGGCTGGTCCAGCTTCCCCAGTAGCTCCCGTGGCTCCTGTCGCCCCGGCTGGTCCGGCGTCCCCGGTAGCTCCTGT                                                                                                                                             >  2:400658/1‑140                                                                                                                    CCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGT                                                                                                                  <  1:1657553/59‑1                                                                                                                                GCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTC                                                                                                                        <  1:1345726/41‑1                                                                                                                                 CTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTG                                                                                                          >  2:1047016/1‑54                                                                                                                                 CTTCCCCGGGAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTG                                                                                                          <  1:1047016/54‑1                                                                                                                                     CCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTC                                                                                                                        <  1:1385874/36‑1                                                                                                                                          TAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCTGTCGCTCCGGTTGGTCCGGCTGGT                                                                          <  1:30973/77‑1                                                                                                                                          TAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCTGTCGCTCCGGTTGGTCCGGCTGGT                                                                          >  2:30973/1‑77                                                                                                                                            ggTCCTGTCTCTCCGGCTGGTGCGGCGTCCCCGGTAGCTCCTGTCGCTCCTGTCGGTCCGGTTTGTCCGGATTGTCCGGCTTCCCCGGTTGCTCCCGTTGCTCCCGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCC         <  1:1398104/138‑1                                                                                                                                            ccgCCTGGCGCTCCCGCTGGTCCGGCTTCCCCGGTCGCACCTGTCGCTCCGGTCGCTCCGGTTGGTCCGGATGGTCCGGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCC         <  1:524309/137‑1                                                                                                                                               CCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCTGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGT      <  1:1119676/140‑1                                                                                                                                               CCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCTGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGT      <  1:1024542/140‑1                                                                                                                                               CCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCTGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGT      <  2:1816324/140‑1                                                                                                                                               CCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCTGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGT      >  2:199465/1‑140                                                                                                                                                 ccTCGCGCCGGCTGGTCCGGCTTCGCCGGTCGCTGCGCTCGCTCCTGTCGCTCCGGTTGGTCCGGCGGGTCCGGTTTCCCCGGTAGCTCCGGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGTAG    <  2:1347106/138‑1                                                                                                                                                 TGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCTGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGTAG    <  1:638199/140‑1                                                                                                                                                 TGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCTGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGTAG    >  2:1605784/1‑140                                                                                                                                                 TGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCTGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTT‑CCCGGTAGCTCCCGTGGCTCCCGTCGCTCCCGGTGGTCCGGCTGGGCCGGCTTCGCCGGTAGC   >  2:1408509/1‑140                                                                                                                                                  GTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCTGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGTAG    <  2:1754744/139‑1                                                                                                                                                  GTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCTGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGTAG    >  1:2076708/1‑139                                                                                                                                                  GTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCTGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGTAG    <  2:2076708/139‑1                                                                                                                                                  GTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCTGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGTAG    >  1:1754744/1‑139                                                                                                                                                  GTCGCTCCGCCCGCTCCGGCCGCCCCGGTAGCTCCTGACGCTCCTGGCGCTCCGGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCCGTGGCTCCGGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGTAGC   <  2:159344/140‑1                                                                                                                                                   TCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCTGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGTAGCT  >  1:1252349/1‑140                                                                                                                                                                                                                                                                                                TGTCGCTCCCGTCGCTCCGGCTGGTCCAGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGCTGGTCCGGCTGGTCCAGCTTCCCCAGTAGCTCCCGTGGCTCCTGTCGCCCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NZ_CP034943/607325‑607179 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcctgtCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCTGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCCGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTGGTCCGGCTTCCCCGGTAGCT  <  NZ_CP034943/607466‑607328

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.