New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP034943 767776 =147 (1.070)3 (0.020) 3/244 7.8 2.1% coding (189/645 nt) EO946_RS03930 hypothetical protein
?NZ_CP034943 = 767772 142 (1.150)coding (193/645 nt) EO946_RS03930 hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGGCCTGCTTTTGAATACGAATATCGTTATCCAGATGGTTACCCATGGTCTGGCATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGGCGGCTCCGGCCCTGGCATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGGCGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NZ_CP034943/767916‑767776
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcggcggcggcCCTGGCATTGGTAGCGGCGCTGTGCCTGGCTTCGGCGGCGGCCCTGGCATTGGTAGCGGCGCTGTGCCTGGCTTCGGCGGCGGCTCCGGCCCTGGTATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGGCGGCTCCGGCC  <  NZ_CP034943/767772‑767634
                                                                                                                                                                                                                                                                                        
TGGCCTGCTTTTGACTACGAATAGCGGTCTCCCGAGGGGTACCCATGGTCTGGCATTGGCGGCGGCGCTGTGACTGGCTTCGGCGGCGGCTCCGGCCCTGGCATTGGCGGCGGCGCTGTGCCTGGCTTCGGGGGCGGCGG                                                                                                                                              <  2:283710/140‑1
TGGCCTGCTTTTGAATACGAATATCGTTATCCAGATGGTTACCCATGGTCTGGCATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGGCGGCTCCGGCCCTGGCATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGGCGGCGG                                                                                                                                              <  1:1519162/140‑1
TGGCCTGCTTTTGAATACGAATATCGTTATCCAGATGGTTACCCATGGTCTGGCATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGGCGGCTCCGGCCCTGGCATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGGCGGCGG                                                                                                                                              <  2:383194/140‑1
TGGCCTGCTTTTGAATACGAATATCGTTATCCAGATGGTTACCCATGGTCTGGCATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGGCGGCTCCGGCCCTGGCATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGGCGGCGG                                                                                                                                              <  2:285890/140‑1
TGGCCTGCTTTTGAATACGAATATCGTTATCCAGATGGTTACCCATGGTCTGGCATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGGCGGCTCCGGCCCTGGCATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGGCGGCGG                                                                                                                                              <  2:13315/140‑1
TGGCCTGCTTTTGAATACGAATATCGTTATCCAGATGGTTACCCATGGTCTGGCATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGGCGGCTCCGGCCCTGGCATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGGCGGCGG                                                                                                                                              <  2:1770512/140‑1
TGGCCTGCTTTTGAATACGAATATCGTTATCCAGATGGTTACCCATGGTCTGGCATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGGCGGCTCCGGCCCTGGCATGGGCGGCGGCGCTGTGCCTGGCTTCGGCGGCGGCGG                                                                                                                                              <  2:443564/140‑1
                                                    GCATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGGCGGCTCCGGCCCTGGGATTGGCGGCGGCGCTGTGCCTGGCTTCGGCG                                                                                                                                                     >  1:1194069/1‑81
                                                    GCATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGGCGGCTCCGGCCCTGGCATTGGCGGCGGCGCTGTGCCTGGCTTCGGCG                                                                                                                                                     >  1:530902/1‑81
                                                              CGGCGCTGTGCCTGGCTTCGGCGGCGGCTCCGGCCCTGGCATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGGCGGCGGCCCTGGCATTGGTAGCGGCGCTGTGCCTGGCTTCGGCGGCGGCCCTGGCATTGGTAGCGGCG                                                                                <  2:985006/140‑1
                                                               GGCGCTGTGCCTGGCTTCGGCGGCGGCTCCGGCCCTGGCATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGG                                                                                                                                                    >  1:583009/1‑71
                                                                                CGGCGGCGGCTCCGGCCCTGGCATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGGCGGCGGCCCTGGCATTGGTAGCGGCGCTGTGCCTGGCTTCGGCGGCGGCCCTGGCATTGGTAGCGGCGCTGTGCCTGGCTTCGGCG                                                              >  1:1087864/1‑140
                                                                                                  TGGCATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGG                                                                                                                                                    >  2:1882919/1‑36
                                                                                                  TGGCATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGG                                                                                                                                                    <  1:1882919/36‑1
                                                                                                                             CTTCGGCGGCGGCGGCCCTGGCATTGGTAGCGGCGCTGTGCCTGGCTTCGGCGGCGGCCCGGGCCTGGGTAGCGGCGCTGTGCCTGGCTTCGGCGGCGGCTCCGGCCGTGGGCGTGGCGGCGGCGCTGTGCCTGGCTTCG                 >  2:2093018/1‑140
                                                                                                                                 GGCGGCGGCGGCCCTGGCATTGGTAGCGGCGCTGTGCCTGGCTTCGGCGGCGGCCCTGGCATTGGTAGCGGCGCTGTGCCTGGCTTCGGCGGCGGCTCCGGCCCTGGTATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGG             <  2:272069/140‑1
                                                                                                                                   CGGCGGCGGCCCTGGCATTGGTAGCGGCGCTGTGCCTGGCTTCGGCGGCGGCCCTGGCATTGGTAGCGGCGCTGTGCCTGGCTTCGGCGGCGGCTCCGGCCCTGGTATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGGCG           >  2:1839072/1‑140
                                                                                                                                   CGGCGGCGGCCCTGGCATTGGTAGCGGCGCTGTGCCTGGCTTCGGCGGCGGCCCGGGCATTGGTAGCGGCGCTGTGCCTGGCGTCGGCGGCGGCTCCGGCCCTGGTCGTGGCGGCGGCGCTGTGGCTGGCTTCGGCGGCG           >  2:345500/1‑140
                                                                                                                                      CGGCGGCCCTGGCATTGGTAGCGGCGCTGTGCCTGGCTTCGGCGGCGGCCCTGGCATTGGTAGCGGCGCTGTGCCTGGCTTCGGCGGCGGCTCCGGCCCTGGTCTTGGCGGCGGCGCTGTGCCTGGCTTCGGCGGCGGCT        >  2:1308375/1‑140
                                                                                                                                            CCCTGGCAGTGGTTGCGGCGCTGTTCCTGGCTTCGGCGGCGGCCGTGGCATTGGTAGTGGCGCTGTGCCTTGCTTCGGCGGCGGCTCCGGCGCTGGTATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGGCGGCTCCGGCC  <  1:1784044/140‑1
                                                                                                                                                                                                                                                                                        
TGGCCTGCTTTTGAATACGAATATCGTTATCCAGATGGTTACCCATGGTCTGGCATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGGCGGCTCCGGCCCTGGCATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGGCGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NZ_CP034943/767916‑767776
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcggcggcggcCCTGGCATTGGTAGCGGCGCTGTGCCTGGCTTCGGCGGCGGCCCTGGCATTGGTAGCGGCGCTGTGCCTGGCTTCGGCGGCGGCTCCGGCCCTGGTATTGGCGGCGGCGCTGTGCCTGGCTTCGGCGGCGGCTCCGGCC  <  NZ_CP034943/767772‑767634

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.