New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP034943 = 607474118 (0.860)7 (0.060) 3/242 7.7 6.5% coding (317/1125 nt) EO946_RS03185 collagen‑like protein
?NZ_CP034943 607538 = 96 (0.780)coding (381/1125 nt) EO946_RS03185 collagen‑like protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 120 total aligned reads displayed.

GGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGAC  >  NZ_CP034943/607337‑607612
                                                                                                                                         |                                                                                                                                          
tgatcccggaccagatggacctCCCGGTGCGAGGGGAGCCACGGGAGCTACAGGTGAAGCCGGACAAGCCGGACCACCCGGAGCGACTGGAGCGACTGGAGGTACGGGGGAAGCCGGACCAGCCggagcgacaggagcga                                                                                                                                          <  1:1280414/135‑1 (MQ=17)
ggAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcga                                                                                                                                          <  1:335148/140‑1 (MQ=255)
 gaccccggccccgccggaccaCCGGGCGCGACGGGAGCCCCGGGAGCTACGGGGGAAGCCGGACCAGCCGGACCACCGGGCGCGACTGGAGCGACTGGAGCTACCGGGGAAGCCGGACCAGCCggagcgactggagcgac                                                                                                                                         <  1:286103/136‑1 (MQ=14)
 gAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgac                                                                                                                                         >  1:308478/1‑140 (MQ=255)
 gAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACCGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACCGGAGCGACAGGAGCTACCGGGGAAACCGGAGCAACCggagcgacaggagcgac                                                                                                                                         >  2:2031513/1‑140 (MQ=17)
  aaGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgaca                                                                                                                                        <  2:459096/140‑1 (MQ=255)
    gccggaccagccggaccaCCCGGAGCGCCGGGAGCCACGGGAGCCACCGGGGCCGCCGGCCCAGCCGGACCACCCGGAGCGACAGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacagg                                                                                                                                      <  2:430810/140‑1 (MQ=17)
    gccggaccacccggacaaACCGGAGCCACGGGAGCCACGGGCGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacagg                                                                                                                                      <  1:656379/140‑1 (MQ=255)
      cggaccagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggag                                                                                                                                    >  2:1014141/1‑140 (MQ=255)
         accagccggaccaCCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcga                                                                                                                                 <  1:1485187/140‑1 (MQ=255)
         accagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcga                                                                                                                                 >  2:1262396/1‑140 (MQ=255)
          ccagccggacccACCGGAGCGCCGGGAGCCACGGGAGCTACGGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcgac                                                                                                                                <  2:1877899/140‑1 (MQ=255)
          ccagccggaccaACCGGAGCGACGGGAGACACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACGGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcgac                                                                                                                                <  1:1629500/140‑1 (MQ=255)
             gccggaccaACCGGAGCGACGGGAGCCACGGGATCTACCGGGGAATCCGGACCAGCCGGACCAACCGGAGCGACAGCAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGagcgacaggagcgacaggagcgacagg                                                                                                                             >  1:2085276/1‑140 (MQ=255)
             gccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGagcgacaggagcgacaggagcgacagg                                                                                                                             >  1:2085395/1‑140 (MQ=255)
              ccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGACGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAgcgacaggagcgacaggagcgccagga                                                                                                                            >  2:1413823/1‑140 (MQ=255)
              ccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAgcgacaggagcgacaggagcgacagga                                                                                                                            >  2:441067/1‑140 (MQ=255)
              ccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGagcgacaggagcgaccggagcgacaggc                                                                                                                            >  1:447113/1‑139 (MQ=255)
               cggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGcgacaggagcgacaggagcgacaggag                                                                                                                           <  1:1981183/140‑1 (MQ=255)
                  accaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTa                                                                                                                        >  1:56343/1‑140 (MQ=255)
                      aCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAATCCGGACCAGCCGTAGCAACCGGAGCGACAGGAGCGACAGGAGCTACGGGGGAAGCCGGACCAGCCGGAGCgagcggggcgacgggggcgacgggggcgggcgg                                                                                                                    >  1:1914708/1‑134 (MQ=14)
                      aCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGAGCGACAGGCGCGACggg                                                                                                                    >  1:1352053/1‑140 (MQ=255)
                      aCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCgg                                                                                                                    <  1:2026781/140‑1 (MQ=255)
                      aCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCgg                                                                                                                    <  1:1014141/140‑1 (MQ=255)
                       ccGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGCGCGACAGGAGCTACCggg                                                                                                                   >  2:477525/1‑140 (MQ=255)
                           aGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTCCCGGGGAAg                                                                                                               >  2:674835/1‑140 (MQ=255)
                           aGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAg                                                                                                               >  2:397666/1‑140 (MQ=255)
                               cagggAGCAAATGGACCTACAGGCGCACCCGGACCAGCCGGACCCCCGGGAGCCATCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTgg                                                                                                           <  2:1378284/138‑1 (MQ=14)
                                cGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGa                                                                                                          <  1:168013/140‑1 (MQ=255)
                                cGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGa                                                                                                          >  2:1087577/1‑140 (MQ=255)
                                 gggAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGAc                                                                                                         <  1:1488919/140‑1 (MQ=255)
                                 gggAGCCACGGGAGCGACCGGCGCCGCCGGACCACCCGGACCACCCGGAGCGACAGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGAc                                                                                                         <  2:738856/140‑1 (MQ=14)
                                 cggAGCCACGGGAGCCACCGGCGCAGCCGGACCACCCGCACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGAc                                                                                                         <  2:1225797/139‑1 (MQ=17)
                                  ggAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGCGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGAcc                                                                                                        <  1:1437604/140‑1 (MQ=255)
                                  ggAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCGACCGGGGACGCTGGAcc                                                                                                        >  2:1569431/1‑140 (MQ=255)
                                    aGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAg                                                                                                      <  1:402409/140‑1 (MQ=255)
                                         cGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACCGGAGCGACCGGAGCTACCGGGGAATCCGGACCAGCCGGAGCGCCAGGCGCGACCGGAGCGCCCGGAGCTACCGGGGAAGCTGGACCAGCTggc                                                                                                 >  1:229900/1‑139 (MQ=14)
                                             aGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGa                                                                                             <  1:1795573/140‑1 (MQ=255)
                                              gCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGAc                                                                                            >  1:1807010/1‑140 (MQ=255)
                                                 acgggggATGCGGGACCAGCCGTACCCACCGGAGCGACCGGAGCCACAGGAGCTACCGGGGAAGCCGGACCCGCGGGAGCGACAGGACCGACAGGAGCGACTGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACggg                                                                                         <  1:214850/137‑1 (MQ=14)
                                                 aCCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACggg                                                                                         <  2:308478/140‑1 (MQ=255)
                                                   agggttagccggacccgccggaccACCCGGAGCGACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAg                                                                                       <  2:254313/134‑1 (MQ=17)
                                                       gacgccggaccagccggaccaCCCGGAGCGACAGGAGCGACAGGAGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACTGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGAc                                                                                   <  2:1962272/137‑1 (MQ=255)
                                                       gAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGAc                                                                                   >  1:1277412/1‑140 (MQ=255)
                                                          gccggaccagccggaccaACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAgg                                                                                >  1:910377/1‑140 (MQ=255)
                                                          gccggaccagccggaccaACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAgg                                                                                >  1:1896254/1‑140 (MQ=255)
                                                           ccggaccagccggaccaACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGa                                                                               <  1:2102070/140‑1 (MQ=255)
                                                            cggaccagccggaccaACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcgac                                                                                                                                <  1:368667/90‑1 (MQ=255)
                                                            cggaccagccggaccaACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcgac                                                                                                                                >  2:368667/1‑90 (MQ=255)
                                                            cggaccagccggaccaACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAg                                                                              >  1:572801/1‑140 (MQ=255)
                                                            cggaccagccggaccaACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGCAGCGACAGGAg                                                                              >  1:1208112/1‑140 (MQ=255)
                                                               accagccggaccaACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcta                                                                                                                                          >  1:30973/1‑75 (MQ=255)
                                                               accagccggaccaACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcta                                                                                                                                          <  2:30973/77‑3 (MQ=255)
                                                                    ccggaccaACCGGAGCGACAGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCggg                                                                      <  2:1256502/140‑1 (MQ=255)
                                                                    ccggaccaACCGGAGCGACAGGAGCGACAGGAGCTACGGGGGAAGCCGGACCACCCGGAGCGACACGATCGACAGGAGCGACAGGCGCTGCCGGGGAAGCTGGACCACCGGGAGCGACGGGGGCGGCCGGAGCTGCCggg                                                                      >  2:722457/1‑140 (MQ=17)
                                                                        accaccGGGAGCGACCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCCGCCGGAGCGACAGGAGCGACTGGAGCGACAGGAGCTCCCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAg                                                                  <  1:1324078/140‑1 (MQ=18)
                                                                         ccaACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGc                                                                 <  2:56343/140‑1 (MQ=255)
                                                                         ccaACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGc                                                                 <  2:1896254/140‑1 (MQ=255)
                                                                            aCCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTa                                                                                                                        >  2:1673537/1‑82 (MQ=255)
                                                                            aCCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTa                                                                                                                        <  1:1673537/82‑1 (MQ=255)
                                                                             ccGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGTGCATCAGGAGCTACAGGGGAAGCTGGAGCAGCGGGAGCGGCGGGCGCGACAGGCGGTACCGGGGACGCCGGa                                                             >  1:1201839/1‑140 (MQ=18)
                                                                                   cgccaggtgccactggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGTGCGACTGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                       <  1:992379/137‑1 (MQ=17)
                                                                                   cgccaggagagactggagcTCCCGGGGAAGCCGGACCAGCCGGAGCTCCAGGAGCGACTGGAGCCACTGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                       <  2:1786383/137‑1 (MQ=14)
                                                                                   cgacaggagcgacaggagCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                       <  1:1727410/140‑1 (MQ=255)
                                                                                   cgaatggagccactggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCGACCGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                       <  1:1879422/135‑1 (MQ=14)
                                                                                      tgggagccacaggagcTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggg                                                    >  2:156443/3‑140 (MQ=255)
                                                                                      caggagcgacaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACCGGAGCTACCGGGGAAGCAGGACCAGCGGGAGCGGCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggg                                                    >  2:502540/1‑140 (MQ=255)
                                                                                       aggagcgacaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgggg                                                   >  2:1950757/1‑140 (MQ=255)
                                                                                        ggagcgacaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGc                                                  >  2:1727410/1‑140 (MQ=255)
                                                                                           gcgacaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGCAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCAGCCGGCGCCAc                                               >  1:1224868/1‑140 (MQ=255)
                                                                                            cgacaggagcTCCCGGGGAAGCCGCACCAGCCGGAGCTACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACg                                              <  1:391962/140‑1 (MQ=255)
                                                                                               ccggagcTCCGGGGGAAGCCGGACCAGCCGGAGCTTCAGTAGCGACAGGAGCCAAAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGa                                           <  1:846160/138‑1 (MQ=17)
                                                                                                  gagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGcc                                        <  1:1087577/140‑1 (MQ=255)
                                                                                                   agcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCca                                       >  1:1485030/1‑140 (MQ=255)
                                                                                                    gcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTa                                                                           >  2:84918/1‑103 (MQ=255)
                                                                                                    gcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTa                                                                           <  1:84918/103‑1 (MQ=255)
                                                                                                     cTACCGGGGAAGCCGGACCAGCCGGAGCCACAGGACCGACAGGAGCCACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcaca                                     <  1:1515031/140‑1 (MQ=255)
                                                                                                     cTACAGGTGCAGCCGGACCACCAGGAGCCCAAGGAGCGACAGGAGCTACAGGAGCAACCGGCGAAGCCGGACCACCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcaca                                     <  1:839272/140‑1 (MQ=18)
                                                                                                       cccgctgAACCCGCACCAGCCGGAGCGCCAGGAGCCACAGGAGCTACAGGAGCTCCCGGCGAAGCCGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg                                   <  2:278698/134‑1 (MQ=18)
                                                                                                       aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGACGCAGGACCAGCTGGAGCGACGGGAGCGGCAGCAGATACCGGGGAAGCCGCACCAGCCGGGGCAACTGGAGCCACAgg                                   >  1:153736/1‑140 (MQ=18)
                                                                                                       aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGCCCAGCCGGGGCCCCGGGAGCCACAgg                                   >  2:128934/1‑140 (MQ=255)
                                                                                                         cGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgggg                                 <  2:1807010/140‑1 (MQ=255)
                                                                                                            ggAAGCCGGACCCCCCGCAGCGAGAGGAGCGACAGGAGCGACAGGAGCTCCCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTa                              <  1:294960/140‑1 (MQ=21)
                                                                                                            ggAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTa                              <  1:1266401/140‑1 (MQ=255)
                                                                                                             gAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGGGAGTCAGGACCAAACGGGGGACCTGGCCCACCAGGAGCGACGGGAGCCTCCGGAGCTACCGGGGAACCAGGACCACCCGGGGCCCCGGGCGCCCCCggggggcc                             >  2:2093601/1‑136 (MQ=16)
                                                                                                             gAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTCCCGGCGAACCTGGACCAGCAGCAGCGACGGGAGCGACCGGAGCTACCGGGCAAGCCGGCCCAGCCGGGGCCACGGGCGCCACAGGGGCtca                             >  2:647660/1‑138 (MQ=21)
                                                                                                             gAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGCAGCGGGACCAGCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCCCCGGGGcgcc                             >  2:1805439/1‑137 (MQ=18)
                                                                                                             gAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGACGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTAc                             >  2:1295768/1‑140 (MQ=255)
                                                                                                             gAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTAc                             >  1:489981/1‑140 (MQ=255)
                                                                                                                     cccAGCCGGAGCCACCGGAGCGACAGGAGCGACCGGCGCTACCGGGTAAGCTGGCCCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAg                     <  1:1600083/139‑1 (MQ=21)
                                                                                                                     aCCAGCCGGGGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAg                     <  1:156443/140‑1 (MQ=255)
                                                                                                                     aCCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg                                   <  1:257057/126‑1 (MQ=255)
                                                                                                                     aCCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg                                   >  2:257057/1‑126 (MQ=255)
                                                                                                                     aCCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAg                     <  2:2085395/140‑1 (MQ=255)
                                                                                                                     aCCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAg                     <  1:1449095/140‑1 (MQ=255)
                                                                                                                              agcgacaggagcgacaggagcgacaggAGCTACCGGGGAAGCTGGACCAGCTGGAg                                                                                                >  1:2060012/1‑56 (MQ=255)
                                                                                                                              agcgacaggagcgacaggagcgacaggAGCTACCGGGGAAGCTGGACCAGCTGGAg                                                                                                <  2:2060012/56‑1 (MQ=255)
                                                                                                                                   caggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGCGGACGCGGCACCacagctg       >  2:1510250/1‑134 (MQ=18)
                                                                                                                                    aggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAg      >  1:232916/1‑140 (MQ=255)
                                                                                                                                        gcgaccggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGAc  <  2:1024542/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                          
GGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGAC  >  NZ_CP034943/607337‑607612

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.