Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0349431,366,1090GT31.2% 145.3 / 12.4 96D203Y (GAT→TAT) EO946_RS07135PepSY domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base G (43/21);  new base T (0/29);  total (43/53)
Fisher's exact test for biased strand distribution p-value = 7.27e-11
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

AGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATA  >  NZ_CP034943/1365970‑1366246
                                                                                                                                           |                                                                                                                                          
aGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGgatg                                                                                                                                            <  2:1895223/140‑1 (MQ=255)
  aTCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGgatg‑at                                                                                                                                         <  2:900491/140‑1 (MQ=255)
   tCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATa                                                                                                                                        >  1:87242/1‑140 (MQ=255)
    caacaaAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATaa                                                                                                                                       >  1:213083/1‑140 (MQ=255)
            aaCACCTATTACGAAAAAACACGCCAAAACCATTGCTGAGCTAGAAACTGGGGTCAAAGGGTATGCCGCATATCTCTAAAAAAGTGAGGGCACTCTCATCTTTGATGTGTTTGTTTATCTTCGGGATT‑ATAAAGAAGCGa                                                                                                                               <  2:587747/140‑1 (MQ=255)
            aaCACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGa                                                                                                                               >  1:769064/1‑140 (MQ=255)
                 cGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACtgtg                                                                                                                          >  2:1751362/1‑140 (MQ=255)
                 cGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACtgtg                                                                                                                          >  2:306510/1‑140 (MQ=255)
                          aaaaaGAAGCCAAAACCTTTGCTGAGCGATAAACGGGGGGGACTGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTAATCTTTTATGTGGTTGTTGATCTTCCGGATG‑ATGAAGAAGCGACTGTGAAAATTAAt                                                                                                                 <  2:569320/140‑1 (MQ=255)
                                aatccAAAACATTTGATTAGCTATAAAGGGGCGGTACAGGGTTTTACGATTATCTCTAAAAATTTTAGGGAACTCTCATCTTTTATGTGTATGTTTATGTTCGGGTTG‑ATAAATAAGCGACTGTGAAAATTAATGCCTac                                                                                                           <  2:87242/137‑1 (MQ=255)
                                 agCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTaca                                                                                                          >  1:1931348/1‑140 (MQ=255)
                                       aacatttGGTGCGCGTGAACCGGGCGGTACTGGGTATGACGAATATATCTAAAAAAGTGTGGGCATTATATTTTTTTATGTGTTTTTTGATGTTCCGTTTT‑ATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGaa                                                                                                    <  1:438014/135‑1 (MQ=255)
                                             tGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTg                                                                                              >  1:1533745/1‑140 (MQ=255)
                                               gggAGCGAGAAACGGGGGGGACCGCGGATGACGCAGATCGCGAAAAAAGGGAGGGAACTCTCATCTTTTATGTGGATTTTGTTCTTCCGGTTG‑ATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa                                                                                            <  2:1892964/138‑1 (MQ=255)
                                               ctcaGCGACAACCGGGCGGCCCCGCGCTTGCCGCAGATCACGAAAAATGTCAGGGCACTCACATCTTTGATGTGGATTTTTATCTTCCGTATT‑ATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa                                                                                            <  1:2086575/137‑1 (MQ=255)
                                               cTGACCGAGCACCGGGCGGGACCGGGGATGACCCAGATCTCGAAAAATGTGAGGGCACTCTCATCTTTGACGTGGTTGTTGATCTTCCGCATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa                                                                                            <  2:1285482/140‑1 (MQ=255)
                                                 gAGCGATAACCGGGCGGCACAGCGGATGACGCACAACTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGTTGTTGATCTTCCGGATT‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCaaa                                                                                          <  2:268280/140‑1 (MQ=255)
                                                  aGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAAc                                                                                         >  2:1436678/1‑140 (MQ=255)
                                                  aGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTGTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGACAATTAATGCCTACACCGGAAAGGTTGCAAAc                                                                                         >  2:1814834/1‑140 (MQ=255)
                                                   gctagaACCGGGCGGGACCGGGGATGACGCAGATCTCTAAAAAAGTGAGGGCACTCTAATCTTTGAAGTGGTTGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa                                                                                        <  2:673388/137‑1 (MQ=255)
                                                   gCGATAACCGGGCGGCACAGCGGATGAGGCTGTTCTCTAAAAAAGTGAGGGCAGTCGAATTTTTTACGTGTTTTTTTATGTTCGGGATT‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa                                                                                        <  2:1200115/140‑1 (MQ=255)
                                                   gCGAGACCCGGGGGGGACCGCGGATGACGCACATCTCTAAAAAAGTTAGGGCACCCTCATCTTTGAAGTGGATTTTGATGTTCCGGATT‑ATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa                                                                                        <  2:621525/140‑1 (MQ=255)
                                                   gCGAGAAACGGGCGGCACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTTATCTTCCGGTTT‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa                                                                                        <  2:420417/140‑1 (MQ=255)
                                                   gCGACAAACGGGCGGGACCGCGGATGCCCCATATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGATGTGTATTTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa                                                                                        <  2:184871/140‑1 (MQ=255)
                                                    cGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAACCAt                                                                                       >  1:1158553/1‑140 (MQ=255)
                                                    cGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt                                                                                       >  1:729860/1‑140 (MQ=255)
                                                    cGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt                                                                                       >  1:673388/1‑140 (MQ=255)
                                                     gagaAACGGGCGGGACAGCGGATCACGCACATCTCTAAAAAAGTGTGGGCACTCTCATCTTTTAATTGGATGTTGATCTTCCGGTTT‑ATAAATAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAtt                                                                                      <  2:1390879/140‑1 (MQ=255)
                                                      caaaccggggggcACAGCGTATGACCCAGATACCCAAAAAAGTGAGCCAACTCTAATATTGTAAGTGTTTTTTGATCTCCCGGATT‑ATAACCAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATtg                                                                                     <  1:1353139/135‑1 (MQ=255)
                                                      ataaccggggggtACAGCTGATGATGAATATGTCTAAAATATTTACGGCACTCTAATGTTTTATTTTTATGTTGATCTTGCTGTTT‑TTAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATtg                                                                                     <  2:1295090/135‑1 (MQ=255)
                                                      agacccgggcgggACCGGGTATGACGAATATCTCTAAAAATGTGAGGCCACTCTAATCTTTGAAGTGGATGTTTATCTTCGGTTAT‑AAAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATtg                                                                                     <  1:1855494/135‑1 (MQ=255)
                                                      agaacggggcgggACAGGGGATGACGCACATCTCAAAAAAATTGAGGCAACTCTAATTTTTTAAGTGGTTGTTGATCTTCCGGATT‑AAAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATtg                                                                                     <  1:1855509/134‑1 (MQ=255)
                                                      agaACCGGGGGGGACCGGGTTTGCCGCAGATCTCGAAAAATGTGAGGGCACTCTCATATTTTAAGTGGATGTTGATCTCCCGGATT‑ATAACGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATtg                                                                                     <  2:650750/140‑1 (MQ=255)
                                                      agaAACGGGCGGGACCGCGGATGACGCATATCTCTAAAAAAGTGTGGGCACTCTAATCTTTGAAGTGGAGGTTTATCTTCCGGATT‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATtg                                                                                     <  2:1031937/140‑1 (MQ=255)
                                                      acaacggggcgggACCGCGTATCACGCACATCTCTAAAAAAGTTAGGCCACTCTAATCTTTGACGTGTTTGTTTATCTTCCGGATT‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATtg                                                                                     <  1:1450448/134‑1 (MQ=255)
                                                      acaaccggggggcACAGGGGATTCCGAAGATATCTAAAAATGTGAGGGAAATCTCATATTTGAAGTGGATTTTGATCTTCCGGATT‑ATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATtg                                                                                     <  2:1093620/135‑1 (MQ=255)
                                                         aaCGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGACAGGTTGCAAACATTgtgt                                                                                  >  1:167329/1‑140 (MQ=255)
                                                         aaCGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTgtgt                                                                                  >  1:1750749/1‑140 (MQ=255)
                                                           cgggcgggACCGGGGATGACGAATATCTCAAAAAATTTGAGGGCACTCTAATCTTTGACGTGGAGTTTCATCTTCCGGATG‑ATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTAt                                                                                <  1:278169/140‑1 (MQ=255)
                                                           cgggcgggACAGCGTATGACGCAGTTCTCTAAAAAAGTGAGGGCACTCTCATCTTTCATGTGGATGTTGATCTTCCGGATT‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTAt                                                                                <  2:499521/140‑1 (MQ=255)
                                                           cgggcgggACAGCGTATGACGCAGATCGCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTAt                                                                                <  2:616676/140‑1 (MQ=255)
                                                              gcgggACAGCGGTTCCCGCATATCTCTAAAATAGTTAGGGCATTCTCATATTTGAAGTGGTTGTTGATTTTCGGTTTT‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAg                                                                             <  2:1030527/140‑1 (MQ=255)
                                                                  gACAGCGGATGACGCAGATCTCGAAAAAAGTTAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATTCCTACACCTCAAAGGTTGCAAACATTTTGTATGAGGACt                                                                         >  2:1634083/1‑140 (MQ=255)
                                                                  gACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACAACGGAAAGGTTGCAAAAATTGTGTATGAGGACt                                                                         >  2:1634126/1‑140 (MQ=255)
                                                                  gACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGAATGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACt                                                                         >  2:836123/1‑140 (MQ=255)
                                                                       cGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATCAAGAAGCGAGTGTGAAAATTATTGCCTACACCGGACAGGTTGCAGACATTGTGTCTGAGGACTGCCgg                                                                    >  1:1653230/1‑140 (MQ=255)
                                                                       cGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACgg                                                                    >  2:1845034/1‑140 (MQ=255)
                                                                       cGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACgg                                                                    >  1:1354016/1‑140 (MQ=255)
                                                                       cGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACgg                                                                    >  1:461619/1‑140 (MQ=255)
                                                                            gACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTtct                                                               >  1:844739/1‑140 (MQ=255)
                                                                                 aGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCtcatca                                                          >  2:337784/1‑140 (MQ=255)
                                                                                   aTCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCaaa                                                        >  2:805620/1‑140 (MQ=255)
                                                                                   aTCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCaaa                                                        >  2:1392615/1‑140 (MQ=255)
                                                                                      tccaaaaaaTTGAGGGAAATAAAATCTTTTACGTGGTTTTTTATCTT‑CGGCTGCATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATtc                                                     <  1:541087/137‑1 (MQ=255)
                                                                                        gAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGTACTGACGGGTTCTCATCAAATtctc                                                   >  2:1440017/1‑140 (MQ=255)
                                                                                                  aGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTtctct                                         >  1:54463/1‑140 (MQ=255)
                                                                                                       aCTCTATTCTTTGATGTGTATGTTGATCTTCCGGATT‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGttt                                    <  1:384462/140‑1 (MQ=255)
                                                                                                         tctcATCTTTCACGTGTCTTGTGATCTGCCGTTTC‑ATACAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTc                                  <  1:199576/140‑1 (MQ=255)
                                                                                                         tctcATATTTGAAGTGGATGTTGATGTTCCGGATG‑TTAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTc                                  <  2:466741/140‑1 (MQ=255)
                                                                                                           taaTCTTTTATGTGTATGTTTATCTTCCGGTTG‑ATAAATAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCt                                <  2:1202103/138‑1 (MQ=255)
                                                                                                             aTCTTTGAAGTGGAGTTTTATCTTGGGGATG‑ATACAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCttt                              <  1:1583101/140‑1 (MQ=255)
                                                                                                                ttttAAGTGGATGTTTATCTTCCGGATT‑ATAAATAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCAt                           <  2:461619/140‑1 (MQ=255)
                                                                                                                tttGAAGTGGATGTTGATCTTCCGGATT‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCAt                           <  2:1653230/140‑1 (MQ=255)
                                                                                                                tttGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCAt                           <  2:1354016/140‑1 (MQ=255)
                                                                                                                  tGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGt                         >  2:583230/1‑140 (MQ=255)
                                                                                                                  tGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGt                         >  1:1185206/1‑140 (MQ=255)
                                                                                                                  tGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGt                         >  1:362232/1‑140 (MQ=255)
                                                                                                                  tGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGt                         >  1:1467268/1‑140 (MQ=255)
                                                                                                                  tGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGt                         >  1:1810324/1‑140 (MQ=255)
                                                                                                                    atgTGGATGTTGATCTGCCGGATT‑ATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTg                       <  1:1203794/138‑1 (MQ=255)
                                                                                                                    aattGGATGTTTATCTTCCGTATT‑ATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTg                       <  2:118220/137‑1 (MQ=255)
                                                                                                                    aaGTGTATGTTGATCTTCCGGATT‑ATAAACCAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTg                       <  1:1987730/140‑1 (MQ=255)
                                                                                                                    aaGTGGTTTTTGATCTTCCGTATC‑TTAATCAAGCGACTGTGAAAATTAATGCCTACACCGGAACGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTGTCCTTTCATGTTg                       <  1:1923212/140‑1 (MQ=255)
                                                                                                                    aaGTGGTTGTTGATCTTCCGGATG‑ATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTg                       <  1:2072943/140‑1 (MQ=255)
                                                                                                                     aGTGGTTGTTTATCTTCCGGATT‑ATAACGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGa                      <  2:1000799/140‑1 (MQ=255)
                                                                                                                     aGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGa                      <  2:769064/140‑1 (MQ=255)
                                                                                                                      gTGGATGTTGATCTTCCGCATC‑ATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAg                     <  2:1936689/140‑1 (MQ=255)
                                                                                                                       tGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgt                    >  2:193971/1‑140 (MQ=255)
                                                                                                                       tGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgt                    >  1:145670/1‑140 (MQ=255)
                                                                                                                       tGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgt                    >  2:916604/1‑140 (MQ=255)
                                                                                                                         tttGTTTATCTTCCGGTTT‑ATAACCAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt                  <  1:1876553/138‑1 (MQ=255)
                                                                                                                         tatttttaTCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt                  <  2:631438/133‑1 (MQ=255)
                                                                                                                         taTGTTGATCTTCCGGATT‑ATAAAGAAGCGACTTTTAAAATTAATGCCTACACCGGAAAGGTTGAAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt                  <  2:489554/139‑1 (MQ=255)
                                                                                                                         gtttttGATCTTCCGGATT‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt                  <  2:1931348/136‑1 (MQ=255)
                                                                                                                         gATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt                  >  1:31575/1‑140 (MQ=255)
                                                                                                                         gATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt                  >  2:732193/1‑140 (MQ=255)
                                                                                                                         gATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt                  >  2:291502/1‑140 (MQ=255)
                                                                                                                         gATGTTGATCTTCCGGATG‑ATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt                  <  2:1691837/140‑1 (MQ=255)
                                                                                                                             ttGATCTTCCGGATG‑ATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTaa              <  1:1831967/140‑1 (MQ=255)
                                                                                                                              ttaTCTTCCTTATT‑ATAAATACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTaaa             <  1:377577/138‑1 (MQ=255)
                                                                                                                              tGATCTTCCGGTTG‑ATAAAGCAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTaaa             <  1:459696/140‑1 (MQ=255)
                                                                                                                              tGATCTTCCGCATG‑ATAACCACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTaaa             <  2:257665/140‑1 (MQ=255)
                                                                                                                               gATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAACGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAAc            >  1:484232/1‑140 (MQ=255)
                                                                                                                                 tCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTg          >  2:362972/1‑140 (MQ=255)
                                                                                                                                 tCTGCCGGATG‑ATAACCAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTg          <  2:1736793/140‑1 (MQ=255)
                                                                                                                                   ttCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGaa        >  1:1773093/1‑140 (MQ=255)
                                                                                                                                   ttCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGaa        >  1:1318618/1‑140 (MQ=255)
                                                                                                                                     ccGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACt      >  2:1336301/1‑140 (MQ=255)
                                                                                                                                         atg‑atAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATa  <  2:31575/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                          
AGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATG‑ATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATA  >  NZ_CP034943/1365970‑1366246

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑