Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0349433,219,8230AC22.1% 256.4 / 12.9 127intergenic (+3/‑58)oxdC/EO946_RS16675oxalate decarboxylase/regulatory YrvL family protein
Reads supporting (aligned to +/- strand):  ref base A (54/45);  new base C (0/28);  total (54/73)
Fisher's exact test for biased strand distribution p-value = 2.19e-08
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 129 total aligned reads displayed.

ATGTATCTTTAAACCAATGGCTTGCAATGCTTCCTGAAACATTAGTTCAACAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGCTCTTTATAAAGTACTCGCTGGCCGCGACAGCAGTGGTGTTGAC  >  NZ_CP034943/3219687‑3219960
                                                                                                                                         |                                                                                                                                          
aTGTATCTTTAAACCAATGGCTTGCAATGCTTCCTGAAACATTAGTTCAACAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACg                                                                                                                                        >  1:1500266/1‑140 (MQ=255)
 tttataTTTAAACCATGGGTTTGAAATGCTTCCTGAAACATTAGTTCAACAGAATCTGCATTTAGGAAAATACTTTACTGATATTCTTTCCAATGAAAAGCATCCGGTTGT‑AAAAAATAAATCCAGTAAATAAAAC‑ACGa                                                                                                                                       <  2:533566/138‑1 (MQ=255)
 tttATTTTAAAACCAAGGGTTTGCATTGTTTCCTGAAACATTTTTTAAACAGAATTTTTTTTTAGCAAAAGACTTTACTTATATTCTTGCTAAACAAAAGCATCGGTTTTT‑AAAAAATAAATGCAGTAAATAAAAA‑ACGa                                                                                                                                       <  2:531866/138‑1 (MQ=255)
 tttATCTTTAAACCAATGGCTTTCAATGCTTCCTTAAACATTATTTCAACAGCATCTTTATTTAGGAAAAGAATTTACTGATTTTATTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGa                                                                                                                                       <  2:648176/138‑1 (MQ=255)
 tGTATCTTTAAACCAATGGCTTGCAATGCTTCCTGAAACATTAGTTCAACAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGa                                                                                                                                       >  1:772627/1‑140 (MQ=255)
 tGTATCTTTAAACCAATGGCTTGCAATGCTTCCTGAAAAATTAGTTCAACAGCATCTTGATTTAGTAAAATAATTTACTGATATTCTTTCTAAAGAAAAGCATCCGGTTTT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGa                                                                                                                                       <  2:436384/140‑1 (MQ=255)
     tCTTTAAACCAATGGCTTGCAATGCTTCCTGAAACATTAGTTCAACAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAg                                                                                                                                   >  2:434211/1‑140 (MQ=255)
     tCTTTAAACCAATGGCTTGCAATGCTTCCTGAAACATTAGTTCAACAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAg                                                                                                                                   >  2:1025324/1‑140 (MQ=255)
          aaaCCAATGGCTTGCAATGCTTCCTGAAACATTAGTTCAACAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGc                                                                                                                              >  2:1510671/1‑140 (MQ=255)
           aaCCAATGGCTTGAATTGCTTCCTGAAAAATTATTACAACAGCATGTTTATTTAGTAAAAGACTTTACTTATTTCCTTTCGAAACAAAAGCATCCGGTTTT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCa                                                                                                                             <  2:1924361/140‑1 (MQ=255)
            aCCAATGGCTTGCAATGCTTCCTGAAACATTAGTTCAACAGCATCTTGATTTAGGACAAGACTTTACTCATATTCTTTCGAAAGAAAAGCATCCGTTTGT‑ACAAAAGAAATGCAGTAAATAAAAA‑ACGACATGCTTGctg                                                                                                                            >  2:1167662/1‑138 (MQ=255)
                aTGGCTTGCAATGCTTCCTGAAACATTAGTTCAACAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCagagag                                                                                                                        >  1:1747088/1‑140 (MQ=255)
                aTGGCTTGCAATGCTTCCTGAAACATTAGTTCAACAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCagagag                                                                                                                        >  1:1838977/1‑140 (MQ=255)
                 tGGCTTGCAATGCTTCCTGAAACATTAGTTCAACAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGc                                                                                                                       >  1:243854/1‑140 (MQ=255)
                 tGGCTTGCAATGCTTCCTGAAACATTAGTTCAACAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGc                                                                                                                       >  2:389663/1‑140 (MQ=255)
                 tGGCTTGCAATGCTTCCTGAAACATTAGTTCAACAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGc                                                                                                                       >  1:511/1‑140 (MQ=255)
                 tGGCTTGCAATGCTTCCTGAAACATTAGTTCAACAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGc                                                                                                                       >  2:1832378/1‑140 (MQ=255)
                      tGCAATGCTTCCTGAAACATTAGTTCAACAGCATCTTGATTTAGGAAAAGACTTTACTGATACTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCg                                                                                                                  >  2:879765/1‑140 (MQ=255)
                        cAATGCTTCCTCAAACATTAGTCAAACAGCATCTTGATTTAGCAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAACAAATGCAGTAAATAAAAC‑ACGACCAGCTTGCAGAGAGCAATCGtt                                                                                                                <  2:1398280/140‑1 (MQ=255)
                        aattgtttCCTCAAACTTTAGTTCACCCGCATCTTGATTTAGTAAAAGAATTTACTGATATGGTTTCCAAACAAAAGCACCCGGTTTT‑AAAAAATAAATGCCGTAAATAAAAC‑ACGACCAGCTTGCAGAGAGCAATCGtt                                                                                                                <  2:338217/134‑1 (MQ=255)
                        aaaTTCTTCCTCAAAAATTATTTAAACAGCATCTTGATTTAGCAAAAGACTTTACTGATATTCTTTCTAAAGAAAAGCATCCGTTTGT‑AAAAAATAAATGCATTAAATAAAAC‑ACGACCAGCTTGCAGAGAGCAATCGtt                                                                                                                <  2:1500266/139‑1 (MQ=255)
                        aaaTGATTCATCAAACATTATTTCAACAGCATTTTGATTTAGGAAAAGACTTTACTTATATTCTTTCTAAACAAAAGAATCCGGTTTT‑AAAAAACAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGtt                                                                                                                <  2:1388451/139‑1 (MQ=255)
                             cTTCCTGAAACATTAGTTCAACAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTg                                                                                                           >  2:1239985/1‑140 (MQ=255)
                             cTTCCTGAAACATTAGTTCAACAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGCTgtctc                                                                                                           >  1:2043070/1‑139 (MQ=255)
                               tCCTCAAACTTTATTACAACAGAATTTTTTTTTTGTAAAATACTTTAATTTTATTCTTTCGAAATAAAAGAATCGGGTTCT‑AAAAAAAAAATCCAGAAAAAAAAAC‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCa                                                                                                         <  1:2098848/140‑1 (MQ=255)
                               tCCTCAAACTTTAGTTAAACAGCATTTTTTTTTAGTAAAAGATTTTCATGATATTCTTCCCAAAGAAAAGCATCGGTTTGA‑AAAAAAGAAAGGCAGAAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCa                                                                                                         <  1:2098856/140‑1 (MQ=255)
                               tCCTCAAACATTAGTTCAACAGAATCTTTATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAACAAATCCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCa                                                                                                         <  2:1459949/140‑1 (MQ=255)
                                ccTGAAACATTAGTTCAACAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCaa                                                                                                        >  2:643211/1‑140 (MQ=255)
                                ccTGAAACATTAGTTCAACAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCaa                                                                                                        >  2:688455/1‑140 (MQ=255)
                                ccTGAAACATTAGTTCAACAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCaa                                                                                                        >  2:273762/1‑140 (MQ=255)
                                ccTGAAACATTAGTTCAACAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCAGCCGGTTGT‑AAAAAAGTAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCaa                                                                                                        >  2:379742/1‑140 (MQ=255)
                                cattaaaCATTATTTCAACCCCTTCTTGATTTAGTAAATGACTTTACTGATATTCTTTCGAAACAAAAGCATCCGGTTTT‑AAAAAATAAATGCATTAAATAAAAC‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCaa                                                                                                        <  2:1264038/136‑1 (MQ=255)
                                 ctcaaaCATTAGTACAACAGAATCTTTATTTAGCAAAAGACTTTACGTATATTCTTTCCAAAGAAACGCATCCGGTTGT‑AAAAAAGAAATCCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAg                                                                                                       <  2:1723284/137‑1 (MQ=255)
                                 ctcaaaCATTAGTAAAACTCAATCTTTATTTACCAAAATATTTTAGTCATATTCTTTATAAAAAAAAGCATCCGGTTGA‑AAAAAACAAATGCATTAAAAAAAAC‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAg                                                                                                       <  1:1595193/137‑1 (MQ=255)
                                 ctcaaaCATTAGTAAAACACCATTTTGTGTTAGCAAAACAATTTACTGAAATTATTACGAAATAAAAGCATCCGTTTGT‑AAAAAACAAATCCAGAAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAg                                                                                                       <  1:1529423/137‑1 (MQ=255)
                                 cTGAACCATTTGTTCAACCGCATCTTGATTTAGGAAAAGACTTTACTGATTTTCTTTCGACAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAg                                                                                                       <  2:1536550/140‑1 (MQ=255)
                                 cTGAAACATTAGTTAAACAGCATCTTTATTTAGCAAAAGACTTTACTGATATTCTTACTAACCAAAAGCATCCGGTTGT‑AAAAAAGAAAGCCAGTAAATAAAAC‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAg                                                                                                       <  2:448484/140‑1 (MQ=255)
                                 cTGAAACATTAGTACACCAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCGGGTTTT‑AAAAAAGAAATGCAGAAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAg                                                                                                       <  2:1335506/140‑1 (MQ=255)
                                  tGAAACATTAGTTCAACAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGc                                                                                                      >  1:726798/1‑140 (MQ=255)
                                  tGAAACATTAGTTCAACAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGc                                                                                                      >  2:433548/1‑140 (MQ=255)
                                    aaaCATTAGTTCAACAGCATCTTTATTTAGCAAAATACTTTACTTATATTCTTTCGAAAGAAAAGCAGCGGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCt                                                                                                    <  2:1109198/140‑1 (MQ=255)
                                         ttattaaaaCAGAATATTTATTTAGAAAACTAATTTACTGATATTATTTCTAAATAAAAGAAT‑CGGTTTT‑AAAAAAAAAAATCAATAAAAAAAAACACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTtata                                                                                               <  1:549541/133‑1 (MQ=255)
                                          tAGTTAAACACCAATTTTTTTTAGTAAAATATTTTAGTTATTTTATTTCTAAACAAAAGC‑TCCGTTTTTAAAAAAACAAAGCCATTAAAAAAAAC‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATaa                                                                                              <  1:193033/140‑1 (MQ=255)
                                            tttaaaCAGAATCTTGATTTAGGAAAAGACTTAACTGATAGTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAACA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAgg                                                                                            <  2:2086794/136‑1 (MQ=255)
                                            tttCAACCGATTCTTGATTTAGGAAAAGAATTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAGATGCTGTAAATAAAAC‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAgg                                                                                            <  2:105481/139‑1 (MQ=255)
                                              taaaCAGCATTTTTATTTTGCAAAATAATTTACTTATATTTTTTCTAAATAAAAGCATCCGTTTTT‑AAAAAATAAATGCATTAAATAAAAC‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGgag                                                                                          <  2:772627/138‑1 (MQ=255)
                                              taaaCAGCATCTTTATTTAGAAAAAGAATTTACTGATATTGTTTCTAAATAAAAGCATCGGTTTGT‑AAAAAAGAATTGAATTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGgag                                                                                          <  2:564079/138‑1 (MQ=255)
                                              taaaCAGAATCTTTATTTAGTAAAAGACTTTACTTATATTCTTTCGAAAGAAAAGCATCCGGTTTT‑AAAAAAGAAATCCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGgag                                                                                          <  2:1817429/138‑1 (MQ=255)
                                                 aCAGAATCTTGTTTTATTAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGAAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATg                                                                                       <  2:2060942/140‑1 (MQ=255)
                                                  cAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAACAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACGAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTGTATAAGGAGATGt                                                                                      >  1:741678/1‑140 (MQ=255)
                                                  cAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCTATCGTTCTCTGCAAGCCTTTATAAGGAGATGt                                                                                      >  1:838556/1‑140 (MQ=255)
                                                  cAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGt                                                                                      >  1:923447/1‑140 (MQ=255)
                                                  cAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGt                                                                                      >  1:923384/1‑140 (MQ=255)
                                                  cAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGt                                                                                      >  1:883555/1‑140 (MQ=255)
                                                  cAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGt                                                                                      >  1:1557520/1‑140 (MQ=255)
                                                  cAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGt                                                                                      >  1:745697/1‑140 (MQ=255)
                                                  cAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGt                                                                                      >  2:217612/1‑140 (MQ=255)
                                                  cAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGt                                                                                      >  1:575971/1‑140 (MQ=255)
                                                       tCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAg                                                                                 >  1:2049055/1‑140 (MQ=255)
                                                               tAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACAt                                                                         >  1:1067292/1‑140 (MQ=255)
                                                                          tttACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAATCCTTTATAAGGAGATGTACCAGTGAAACATCAAATttcttc                                                              >  2:2096315/1‑140 (MQ=255)
                                                                            tACTTATATTCTTTCGAAAGAAAAGCATCCGTTTGT‑AAAAAATAAATGAATTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCaa                                                            <  2:902027/140‑1 (MQ=255)
                                                                            tACTTATATTCTTTCCAAATAAAAGAATCGTTTTTA‑AAAAAAAAAATGCAGAAAAAAAAAC‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCaa                                                            <  1:1239985/140‑1 (MQ=255)
                                                                            tACTGATATTCTTTCGAAAGAAAAGCATCGGTTTTT‑AAAAAAGAAATGCATTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCaa                                                            <  2:257876/140‑1 (MQ=255)
                                                                            tACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCaa                                                            >  1:986960/1‑140 (MQ=255)
                                                                                 atatTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGc                                                       >  1:374968/1‑140 (MQ=255)
                                                                                 atatTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGc                                                       >  1:1902138/1‑140 (MQ=255)
                                                                                   atTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCtt                                                     >  1:845428/1‑140 (MQ=255)
                                                                                   atTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCtt                                                     >  1:818046/1‑140 (MQ=255)
                                                                                   atTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCtt                                                     >  1:735855/1‑140 (MQ=255)
                                                                                        ttCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGGTCTCTGCAAGCCTTTATAAGGAGATGTAACAGTGAAACATCAAATTTCTTCAAAACCCTAATTGc                                                >  1:1219900/1‑140 (MQ=255)
                                                                                            aaataaaAGCATCCGTTTTT‑AAAAAATAAATGCATTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGct                                            <  2:1644993/140‑1 (MQ=255)
                                                                                            aaagaaaagaATCCGGTTTA‑AAAAAAGAAATGAATTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGct                                            <  2:116903/140‑1 (MQ=255)
                                                                                            aaagaaaAGCATCCGTTTGT‑AAAAAAGAAATGCATTAAATAAAAC‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGct                                            <  2:78920/140‑1 (MQ=255)
                                                                                            aaacaaaAGCATCCGGTTGT‑AAAAAATAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGct                                            <  2:786993/140‑1 (MQ=255)
                                                                                             aagaaaAGCATCCGTTTTT‑AAAAAATAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGctc                                           <  2:1747088/140‑1 (MQ=255)
                                                                                              agaaaCCCATCCGGTTTT‑AAAAAATAAACCCATTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGctct                                          <  1:389663/140‑1 (MQ=255)
                                                                                              acaaaaGCCTCCGTTTTA‑AAAAAATAAATCCATTAAATAAAAC‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGctct                                          <  1:230074/138‑1 (MQ=255)
                                                                                                 aaaGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGCTCTTta                                       <  2:2006196/140‑1 (MQ=255)
                                                                                                   agaacccGTTTAT‑AAAAAACAAATCCATTAAATAAAAC‑ACGACCAGCTTTCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGCTCTTtata                                     <  1:1832378/135‑1 (MQ=255)
                                                                                                   aGCATCCGGTTTT‑AAAAAATAAATGCAGTAAATAAAAC‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGCTCTTtata                                     <  2:948356/140‑1 (MQ=255)
                                                                                                                     aacaaaTGCAGTAAATAAAAC‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGCTCTTTATAAAGTACTCGCTGGCcgc                    <  1:1011072/137‑1 (MQ=255)
                                                                                                                     aacaaaTCCATTAAATAAAAC‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGCTCTTTATAAAGTACTCGCTGGCcgc                    <  2:374968/137‑1 (MQ=255)
                                                                                                                     aaaaaaTCCAGAAAAAAAACC‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGCTCTTTATAAAGTACTCGCTGGCcgc                    <  1:273762/137‑1 (MQ=255)
                                                                                                                     aaGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGCTCTTTATAAAGTACTCGCTGGCcgc                    <  2:42329/140‑1 (MQ=255)
                                                                                                                     aaGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGCTCTTTATAAAGTACTCGCTGGCcgc                    <  2:154592/140‑1 (MQ=255)
                                                                                                                     aaGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGCTCTTTATAAAGTACTCGCTGGCcgc                    <  1:688455/140‑1 (MQ=255)
                                                                                                                     aaGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGCTCTTTATAAAGTACTCGCTGGCcgc                    <  2:2049055/140‑1 (MQ=255)
                                                                                                                     aaGAAATGCAGTAAATAAAAA‑ACGACCAGCTAGCAGAGAGCAATCGTTCTCTGCAAGCCTTTCTACGGAGATGTACCAGTGAAACATCAAATTTCTTCACAACGCTTATTGCGGCTCTTTATAAAGTACTCGCTGGCcgc                    <  2:2022919/140‑1 (MQ=255)
                                                                                                                       caaaTGCAGTAAATAAAAC‑ACGACCAGCGTGCAGAGAGCAATCGTTCTCTGCATGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGCTCTTTATAAAGTACTCGCTGGCCGCGa                  <  2:267891/139‑1 (MQ=255)
                                                                                                                          gagatttaaataaaAC‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGCTCTTTATAAAGTACTCGCTGGCCGCGAcag               <  1:1744889/134‑1 (MQ=255)
                                                                                                                          atccAGTAAATAAAAC‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGCTCTTTATAAAGTACTCGCTGGCCGCGAcag               <  1:521094/137‑1 (MQ=255)
                                                                                                                             cattaaataaaAC‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGCTCTTTATAAAGTACTCGCTGGCCGCGAcagcag            <  1:1657083/137‑1 (MQ=255)
                                                                                                                             cAGTAAATAAAAC‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGCTCTTTATAAAGTACTCGCTGGCCGCGAcagcag            <  1:639756/140‑1 (MQ=255)
                                                                                                                             cAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGCTCTTTATAAAGTACTCGCTGGCCGCGAcagcag            <  2:12255/140‑1 (MQ=255)
                                                                                                                                taaataaaAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGCTCTTTATAAAGTACTCGCTGGCCGCGACAGCAgtgg         >  1:2005894/1‑140 (MQ=255)
                                                                                                                                  aataaaAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGCTCTTTATAAAGTACTCGCTGGCCGCGACAGCAgtggtg       <  2:1055000/140‑1 (MQ=255)
                                                                                                                                  aataaaAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGCTCTTTATAAAGTACTCGCTGGCCGCGACAGCAgtggtg       >  1:1243324/1‑140 (MQ=255)
                                                                                                                                  aataaaAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGCTCTTTATAAAGTACTCGCTGGCCGCGACAGCAgtggtg       >  1:1243463/1‑140 (MQ=255)
                                                                                                                                      aaaa‑aCGCCGAGCTTTCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGCTCTTTATAAAGTACTCGCTGGCCGCGACAGCAGTGGTGTTGa   <  1:1149210/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                          
ATGTATCTTTAAACCAATGGCTTGCAATGCTTCCTGAAACATTAGTTCAACAGCATCTTGATTTAGGAAAAGACTTTACTGATATTCTTTCGAAAGAAAAGCATCCGGTTGT‑AAAAAAGAAATGCAGTAAATAAAAA‑ACGACCAGCTTGCAGAGAGCAATCGTTCTCTGCAAGCCTTTATAAGGAGATGTACCAGTGAAACATCAAATTTCTTCAAAACGCTTATTGCGGCTCTTTATAAAGTACTCGCTGGCCGCGACAGCAGTGGTGTTGAC  >  NZ_CP034943/3219687‑3219960

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑