Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | ACB122 | 4,359,633 | C→T | 6.1% | R10H (CGC→CAC) | CJ019_04105 ← | Beta‑peptidyl aminopeptidase BapA |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | ACB122 | 4,359,633 | 0 | C | T | 6.1% | 202.5 / 3.3 | 65 | R10H (CGC→CAC) | CJ019_04105 | Beta‑peptidyl aminopeptidase BapA |
Reads supporting (aligned to +/- strand): ref base C (27/34); new base T (2/2); total (29/36) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.58e-01 |
ACCCCAGTCAGGATGTCGCGGCCGTTGGCGGTGCGTCCTCGCACATTGCTGTGACCGACCCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTCAATCATCAGCAGAACCGGGTCTGCCAATTAATTGCCGGTCTTGACCGTGTTCCACGCA > ACB122/4359501‑4359765 | aCCCCAGTCAGGATGTCGCGGCCGTTGGCGGTGCGTCCTCGCACATTGCTGTGACCGACCCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGCCCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCgg > 1:335572/1‑135 (MQ=255) ccccAGTCAGGATGTCGCGGCCGTTGGCGGTGCGTCCTCGCACATTGCTGTGACCGACCCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCgg < 6:68594/134‑1 (MQ=255) cccAGTCAGGATGTCGCGGCCGTTGGCGGTGCGTCCTCGCACATTGCTGTGACCGACCCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGc < 4:155841/135‑1 (MQ=255) aGGATGTCGCGGCCGTTGGCGGTGCGTCCTCGCACATTGCTGTGACCGACCCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGc > 8:164094/1‑135 (MQ=255) cgcgGCCGTTGGCGGTGCGTCCTCGCACATTGCTGTGACCGACCCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATc < 8:7676/134‑1 (MQ=255) cgcgGCCGTTGGCGGTGCGTCCTCGCACATTGCTGTGACCGACCCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCg < 2:78993/135‑1 (MQ=255) cgcgGCCGTTGGCGGTGCGTCCTCGCACATTGCTGTGACCGACCCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCg < 2:61583/135‑1 (MQ=255) ggCCGTTGGCGGTGCGTCCTCGCACATTTCTGTGCCCGACCCGCACGCCCGGCACATCGGTGATGGCATTGAGGGGCCCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGGGGCGTCCTCgtgg > 4:13161/1‑134 (MQ=255) ggCCGTTGGCGGTGCGTCCTCGCACATTGCTGTGACCGACCCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCgtgt > 4:253484/1‑135 (MQ=255) ttGGCGGTGCGTCCTCGCACATTGCTGTGACCGACCCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTc > 4:181337/1‑135 (MQ=255) ttGGCGGTGCGTCCTCGCACATTGCTGTGACCGACCCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTc > 4:111527/1‑135 (MQ=255) gTGCGTCCTCGCACATTGCTGTGACCGACCCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGAtc < 1:340076/135‑1 (MQ=255) gTCCTCGCACATTGCTGTGACCGACCCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGAtctct < 4:123534/134‑1 (MQ=255) gTCCTCGCACATTGCTGTGACCGACCCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGAtctct < 4:306171/134‑1 (MQ=255) tCCTCGCACATTGCTGTGACCGACCCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCg < 7:400834/135‑1 (MQ=255) tCCTCGAACTTTGCTGTGACAGACCAGAACGCCCGGCTCATCGGTTAGTGATTTGTGTGGACCGGGTTGCTTTTTGGGGTTCTTATTATTCAGGTCGCGGGCACGTGGCTTCATCTTGTCTTTCATGATCTCTCg < 6:460140/135‑1 (MQ=255) gCACATTGCTGTGACCGACCCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCtt > 1:366076/1‑135 (MQ=255) tGCTGTGACCGACCCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTg < 3:253484/135‑1 (MQ=255) tgtgACCGACCCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCCCGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGgtt > 5:172352/1‑135 (MQ=255) tgtgACCGACCCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGgtt > 8:232068/1‑135 (MQ=255) tgtgACCGACCCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGgtt > 8:450456/1‑135 (MQ=255) tgtgACCGACCCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCGTTCATGATCTCTCGCTCTTGTTTTGgtt > 8:452365/1‑135 (MQ=255) tgtgACCGACCCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGCCCGAACTGAATATTCAGGTCGCGGGCACGTGGGTTCAGCGTGTCTTTCCTGATCTCGCGCTCTTGGTATGgtt > 6:404457/1‑135 (MQ=255) tgACCGACCCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGgtttg > 2:102204/1‑135 (MQ=255) gaccgaccCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGgtttgt < 3:396377/135‑1 (MQ=255) accgaccCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGgtttgtt < 8:349235/135‑1 (MQ=255) accCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGTCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTTTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCAt < 7:20924/135‑1 (MQ=255) cccGAACGCCCGGGACATGGGTGTTGGCATTGTGGGGAGCGGGTTGCAGTTGGGAGAACTGAATATTGAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATg < 3:6578/135‑1 (MQ=255) gAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGCCt > 3:154338/1‑135 (MQ=255) aCGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTgg < 1:102204/135‑1 (MQ=255) cGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGTCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGttt < 1:405645/135‑1 (MQ=255) cGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGttt < 7:142947/135‑1 (MQ=255) gCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTgg > 3:269678/1‑135 (MQ=255) gCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTgg < 3:111527/135‑1 (MQ=255) tGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTCAatca > 6:163532/1‑133 (MQ=255) tGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGGTTGTTTCATGAATTGGGTTTGGTCAatca > 3:80777/1‑133 (MQ=255) gCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTCAATCATcagca > 7:244823/1‑134 (MQ=255) gCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTCAATCATcagca > 3:223145/1‑134 (MQ=255) gCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTCAATCATcagca > 2:418030/1‑134 (MQ=255) cATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTCAATCATcagcag < 3:181337/134‑1 (MQ=255) cATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTCAATCATcagcag < 5:112613/134‑1 (MQ=255) ttGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTCAATCATCAGCAGAAc > 3:217748/1‑135 (MQ=255) aGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTCGATCATCAGCAGAACCg < 7:203156/134‑1 (MQ=255) ggACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTCAATCATCAGCAGAACCGGGTc < 4:280759/135‑1 (MQ=255) gggTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTCAATCATCAGCAGAACCGGGTCTGCCa > 1:264450/1‑135 (MQ=255) gggTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTCAATCATCAGAAGAACAGGGTCTGACa > 4:227923/1‑135 (MQ=255) tGCAGTTGGCCGAACTGAATATTCAGGTCGCTGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGttt < 3:301565/101‑1 (MQ=255) tGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGttt > 4:301565/1‑101 (MQ=255) tGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTCAATCATCAGCAGAACCGGGTCTGCCaatta > 4:101206/1‑135 (MQ=255) gCAGTTGGCCGAACTGAATATTCAGGTCGTGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTgg > 1:285962/1‑102 (MQ=255) gCAGTTGGCCGAACTGAATATTCAGGTCGTGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTgg < 2:285962/102‑1 (MQ=255) gCAGTTGGCCGAACTGAATATTCAGGTCGTGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTgg > 1:292721/1‑102 (MQ=255) gCAGTTGGCCGAACTGAATATTCAGGTCGTGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTgg < 2:292721/102‑1 (MQ=255) cAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTCAATCATCAGCAGAACCGGGTCTGCCaattaat < 4:401911/135‑1 (MQ=255) cAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTCAATCATCAGCAGAACCGGGTCTGCCaattaa < 7:232068/134‑1 (MQ=255) cAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTCAATCATCAGCAGAACCGGGTCTGCCaattaa < 5:4616/134‑1 (MQ=255) cAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTCAATCATCAGCAGAACCGGGTCTGCCaattaa < 8:158031/134‑1 (MQ=255) cAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTCAATCATCAGCAGAACCGGGTCT‑CCaattaat < 8:54292/134‑1 (MQ=255) ttGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTCAATCATCAGCAGAACCGGGTCTGCCAATTAATTGc > 5:420279/1‑135 (MQ=255) ccGAACTGAATATTCAGGTCGCGGGGACGTGGCTTCATCGTGTCTTTGATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTGAATCATCAGCAGAACCGGGTCTGCGAATTTATTGCCgg < 7:368747/134‑1 (MQ=255) cGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTCAATCATCAGCAGAACCGGGTCTGCCAATTAATTGCCGGTc > 4:411082/1‑135 (MQ=255) tGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTCAATCATCAGCAGAACCGGGTCTGCCAATTAATTGCCGGTCTTGAc < 8:37118/135‑1 (MQ=255) gggcgcgGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTCAATCATCAGCAGAACCGGGTCTGCCAATTAATTGCCGGTCTTGACCGTGTTCcac < 7:128499/132‑1 (MQ=255) ggTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTCAATCATCAGCAGAACCGGGTCTGCCAATTAATTGCCGGTCTTGACCGTGTTCcac < 8:452554/135‑1 (MQ=255) gTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTCAATCATCAGCAGAACCGGGTCTGCCAATTAATTGCCGGTCTTGACCGTGTTCcacg < 7:450456/135‑1 (MQ=255) gTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTCAATCATCAGCAGAACCGGGTCTGCCAATTAATTGCCGGTCTTGACCGTGTTCcacg < 5:163532/135‑1 (MQ=255) cgcgGGCACGTGGCTTCAACGTGGCTTTCATGATCTCTCGCTCTTGTTTAGGTTAGTTTCATGACTGCGGTTAGGTCAATCATCAGCAGAACCCTCACTGCCAATTAATTTCCGGTCATGACCGTTTTCaacgcc > 2:206007/1‑134 (MQ=255) | ACCCCAGTCAGGATGTCGCGGCCGTTGGCGGTGCGTCCTCGCACATTGCTGTGACCGACCCGAACGCCCGGCACATCGGTGATGGCATTGAGGGGACCGGGTTGCAGTTGGCCGAACTGAATATTCAGGTCGCGGGCACGTGGCTTCATCGTGTCTTTCATGATCTCTCGCTCTTGTTTTGGTTTGTTTCATGACTGGGGTTTGGTCAATCATCAGCAGAACCGGGTCTGCCAATTAATTGCCGGTCTTGACCGTGTTCCACGCA > ACB122/4359501‑4359765 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |