| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | ACB122 | 1,934,465 | C→G | 17.0% | intergenic (‑156/‑54) | CJ019_01849 ← / → CJ019_01850 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | ACB122 | 1,934,465 | 0 | C | G | 17.0% | 193.6 / 8.6 | 92 | intergenic (‑156/‑54) | CJ019_01849/CJ019_01850 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (29/46); new base G (14/2); total (43/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.58e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTTAGATAGTAGCCCGGCGCCAAACCTTTGGCATGCAAGGATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAGGCT > ACB122/1934337‑1934596 | gTTAGATAGTAGCCCGGCGCCAAACCTTTGGCATGCAAGGATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTgtgt > 7:451698/1‑135 (MQ=255)gTTAGATAGTAGCCCGGCGCCAAACCTTTGGCATGCAAGGATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTgtgt > 3:55704/1‑135 (MQ=255) aTAGTAGCCCGGCGCCAAACCTTTGGCATGCAAGGATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTGTGGTGTTggtg > 5:310446/1‑132 (MQ=255) tagtagCCCGGCGCCAAACCTTTGGCATGCAAGGATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAg > 8:318439/1‑134 (MQ=255) cccGGCGCCAAACCTTTGGCATGCAAGGATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTGGTGTGGTGGAGGTAgagg > 5:308388/1‑133 (MQ=255) cccGGCGCCAAACCTTTGGCATGCAAGGATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTTCATGAAcatg > 6:170367/1‑135 (MQ=255) cGGCGCCAAACCTTTGGCATGCAAGGATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAgatgat < 5:420187/135‑1 (MQ=255) cGGCGCCAAACCTTTGGCATGCAAGGATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAgatgat < 1:69201/135‑1 (MQ=255) cGGCGCCAAACCTTTGGCATGCAAGGATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAgatgat < 4:117165/135‑1 (MQ=255) cGGCGCCAAACCTTTGGCATGCAAGGATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAgatgat < 7:174398/135‑1 (MQ=255) cGGCGCCAAACCTTTGGCATGCAAGGATCGCGCAGGCCGAGGTAGGACGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAgatgat < 5:352551/135‑1 (MQ=255) gcCAAACCTTTGGCATGCAAGGATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTGGTGTGTTGGCGGAAGATGGTGCaa > 5:162019/1‑135 (MQ=255) cAAACCTTTGGCATGCAAGGATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCGTGTGTTGCCGGTAGCTGATGCaaac > 1:280519/1‑133 (MQ=255) aaaCCTTTGGCATGCAAGGATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTGGTGTGGTGGAGGAAGATTATGCAAtag > 5:445517/1‑133 (MQ=255) aaCCTTTGGCATGCAAGGATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAAtctc < 7:318439/135‑1 (MQ=255) cTTTGGCATGCAAGGATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCaa < 4:55704/135‑1 (MQ=255) cTTTGGCATGCAAGGATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCaa < 1:441265/135‑1 (MQ=255) cTTTGGCATGCAAGGATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCaa < 6:323854/135‑1 (MQ=255) gCATGCAAGGATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCATGAAGATGATGCAATCTCCAAGccc > 1:137285/1‑134 (MQ=255) gCATGCAAGGATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCACGAAGATGATGCAATCTCCAAGAcc > 4:190129/1‑134 (MQ=255) cATGCAAGGATCGCGCATGGCGAGGTAGGCCGATGGCGCTAATGGCATTGTGCTGTCGCATATGGTGCGGGTGCAGGTCGCAGCTGGATCAGGTGGTTTTGTGTTGCAGGAAGATTATGCAATCTCCAAGACCTg < 4:165056/135‑1 (MQ=255) aaGGATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTTGGTTGCCGGAAGTTGATGCAATATCCAAGCCCGGACGAg > 8:219204/1‑135 (MQ=255) aGGATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCGTGTGTTGCAGGAAGATGATGCAATCTACAAGACCTGACggcg > 5:120763/1‑132 (MQ=255) ggATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTGGTGTGGTGCAGGAAGCTGATGCAATCTCCAAGCCCGGACGAggg > 3:120078/1‑135 (MQ=255) ggATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAggg > 3:124738/1‑135 (MQ=255) ggATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTGGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGCCGAggg > 4:82449/1‑135 (MQ=255) ggATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCGTGTGGTGGAGGCAGCTGATGCAAAATACAAGACCAGACGAgcg > 5:344865/1‑133 (MQ=255) gcgcAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTGTTGGGGTGGCGGGAGATTCTGCACTCTGCACGACCGGTCGCGTGGATgg > 2:379304/1‑134 (MQ=255) aGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGGAGGAAGATGATGGAATCTCCAAGACCTGACGACGGGTTGCGTTg > 8:250679/1‑135 (MQ=255) aGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCGTGTGTTGCAGGAAGATGCTGCAATCTCCAAGACCTGACGAGGGGATGCATTg > 8:23194/1‑135 (MQ=255) aGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCGTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCtgtg > 2:33466/1‑135 (MQ=255) ggCCGAGGTAGGCCGATGTCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGTTCGTCTTGTGGTGCTGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGa < 7:383498/135‑1 (MQ=255) ccGAGGTAGGCCGATGGCGCTTATGGGATTGTGCTGTGGCATATGGGGCGGGTGCTGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGa < 7:26400/133‑1 (MQ=255) tAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTGGTGTGTTGGAGGGAGATGCTGGCATCTCCCAGCACGGGCGAGGGGGTGGGTTGTTgggcact > 3:294160/1‑130 (MQ=255) aGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGGTGCAGGAACGAGTAGCCAGCTCCCAGCCCGGACGAGGGGATGCTTAGATGGCAAcgt > 5:196034/1‑133 (MQ=255) gcgcTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTGTTGTGTTGGAGGAAGCTGATGCAATCTCCAAGTCCGGTCGAGGGGGTGCTTTGATGGGGACTTTGGAGaaaa > 4:38585/1‑135 (MQ=255) gcTAATGGCATTTGGGTTTCGCTTTTGGGGCTGGGGCAGGTCGAAGGTGGTTCTGTTCGTCTTGTGTTGCAGGACTATTTTCAAATCTCAAAGACGTGACGAGGTTATGCTTTGTTGGCAACTTTGAAGAAATTg < 4:450324/135‑1 (MQ=255) gcTAATGGCATAGTGCTGTGGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGAAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATg < 7:23194/135‑1 (MQ=255) gcTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCTGGTCGCAGCTGGATCAGGTCGGCTTGTGTTGAAGGAAGATGCTGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATg < 7:453022/135‑1 (MQ=255) aTGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTGtt > 8:170875/1‑59 (MQ=255) aTGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCtt < 7:170875/59‑1 (MQ=255) aTGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGGTGCTTTGATGGGACCTTTGAAGAAAATGCGAc > 7:153280/1‑135 (MQ=255) gCATAGGGCTGGCGCATATGGGGGGGGGGCAGGTCGCAGCTGGAGCAGGTCGGCTGGTGTTGCAGGACGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGtt < 6:306245/135‑1 (MQ=255) cATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGtt < 8:451698/134‑1 (MQ=255) aTAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTc < 2:69615/135‑1 (MQ=255) aTAGTGCGGTCGCATATGGGGCGGGTGCAGGGCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTc < 8:349924/135‑1 (MQ=255) tGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTGTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTgg > 2:259459/1‑135 (MQ=255) tGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTGGTTTGTTTGCGTTATAGGATGCAATCTCCAAGACCGGACGCGGGGATGCTTTTATGGCAACATTGAAGAAAAAGCGCCCTTTACttg > 6:310855/1‑133 (MQ=255) tGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGGAGGAAGATGATGGAATCGCCAAGACCGGACGCGGGGCTGCGTTGTTGGGAACTTTGAAGAAAATGCGACGGTTCCTgg > 8:180767/1‑135 (MQ=255) gCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTggg < 7:454335/135‑1 (MQ=255) tGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCGTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGTTGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCg > 8:251551/1‑135 (MQ=255) gTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCGTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGt > 7:357325/1‑135 (MQ=255) acagCATATGGGGCGGGTGCAGGTCGCAGCTGGATGAGGTCGTCTTGTGTTGCATGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGt < 8:313302/132‑1 (MQ=255) cGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTgg > 8:97370/1‑135 (MQ=255) cGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGGCGTGTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTgg < 2:259127/135‑1 (MQ=255) gattttGGGGCGGGGGCCGTGCGCAGCTGTAGCAGGTCGTGTTGTGTTGATGTAATATGATGCAATCGCCAACACCTGTCGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTggg < 5:5843/130‑1 (MQ=255) gCATCTGGGGCGGGTGCAGGTCGCAGCGGGATCAGGGCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTggg < 6:232745/135‑1 (MQ=255) gCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTggg < 7:345549/135‑1 (MQ=255) cATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGCCGAGGGGATGCGTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGc > 7:466715/1‑135 (MQ=255) tatGGGGCGGGTGCAGGTCGCAGCTGGTTCAGGTCGTCTGGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCAc < 8:222830/135‑1 (MQ=255) atGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCAcc < 7:386516/135‑1 (MQ=255) atGGGGCGGGTGCAGGGCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTTAAGAAAATGCGACGTTTCCTGGGCGTGGGCAcc < 5:195150/135‑1 (MQ=255) agggggCGGGTGCCGGGCGCCGCTGGATCAGGGCGGCTTGTGTGGCCGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCAcc < 6:373402/133‑1 (MQ=255) agagaccGGGTGCAGGTCGCAGCTGCATCAGGTCGTCTTGTGTGGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCAcc < 5:465595/129‑1 (MQ=255) tGGGGCGGGTGCAGTTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCAcc < 6:308388/134‑1 (MQ=255) ggggCGGGTGCAGGTCGCAGCTGGATCAGGTCGTGGTGTGTTGGAGGAAAATGATTCAATCTCCCAGCCCGGCCGAGGGGATGGGTTGCTGGCCACATTGAAGAAAATGCGACGGTTCCTGGGCGTGGGGCCCGc > 5:72354/1‑135 (MQ=255) ggggCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGc > 7:128313/1‑135 (MQ=255) ggggCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCGTGTGTTTGAGGAAAATTATTGAAAAACCAAAACACGCCGCAGGGGTGCGTTTATTGCAACTTTGAATAAAAAGCCACCTTTACGGGGCGGGGGGCCCGc > 6:256426/1‑135 (MQ=255) gCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAAACTCCAAGACCGGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGGGACGTTTCCTGGGCGTGGGCCCCGCCCt > 6:232544/1‑135 (MQ=255) gggTGCAGGGCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTgg < 2:363354/135‑1 (MQ=255) gggTGCAGGGCGCAGCTGGAGCTGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTgg < 8:148386/135‑1 (MQ=255) tGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGCTGCGTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCGGGTaa > 3:302710/1‑135 (MQ=255) gCAGGTCGCAGCTGGATCAGGTCGTGTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTTCTTGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTTAt > 5:157723/1‑135 (MQ=255) gCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGGAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATTCGACGTTTACTGGGCGTGGGCGCCCCCCAggcggt > 7:313302/1‑131 (MQ=255) gCAGGTCGCAGCTGGATCAGGTCGTCGTGTGTTGCAGGAAGATGATGCCATCTCCAAGCCCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGTGCGTGGGCACCGCCCAGGTAAt > 6:442188/1‑135 (MQ=255) aGGTCGCCGCTGGATCAGGTCGTCGTGTGTTGCAGGAAGATGATGCAATCTACAAGCACAGACGAGGGGATGGTTTGATGTCCACGTTGAAGACAATTCGAAGTTTGCTGGGCGTGGGCGACGCCCTGGAAATgg > 4:450987/1‑135 (MQ=255) gggcGCAGCTGGTTCAGGTCGTCTTGTGTTGCAGGAAGATGCGGCAATCTCCACGCCCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGc < 3:441320/132‑1 (MQ=255) ggTCGCAGCTGGATCAGGTCGTGTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGGCGAGGGGGTGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATgg > 2:79530/1‑134 (MQ=255) ctgCTGGATCCGGTCGGCTTGGGTTGCCGGAAGATGATGCAAGCTCCCAGCCCTGACGAGGGGAGGCTTGGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGa < 4:245045/133‑1 (MQ=255) cAGCTGGATCCGGTCGTCTTGTGTTGCAGTAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGa < 5:416301/135‑1 (MQ=255) cAGCTGGATCAGGTCGTCTTGTGTGGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGa < 4:396359/135‑1 (MQ=255) cAGCGGGATCAGGGCGTCTTGGGTTGCAGGAAGATGCTGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGa < 6:310446/135‑1 (MQ=255) ggATCAGGTCGTCTTGTGTGGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCt < 7:397847/135‑1 (MQ=255) ggATCAGGTCGTCTGGTGTTGCAGGAAGAGGATGCAAGCGCCAAGCCCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAACTGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCt < 5:268279/135‑1 (MQ=255) aTCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCt < 7:300295/133‑1 (MQ=255) aTCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCt < 2:143034/133‑1 (MQ=255) aTCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCt < 1:153234/133‑1 (MQ=255) aTCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCt < 1:111010/133‑1 (MQ=255) aTCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTg < 8:128313/134‑1 (MQ=255) aTCAGGTCGTCTTGGGTTGCTGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGAGGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCt < 1:400852/133‑1 (MQ=255) aTCAGGGCGTCTTGTGTTGCAGGAAGAGGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCt < 1:145321/133‑1 (MQ=255) gggcggcTTGTGTGGCAGGAAGATGCTGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAg < 5:285165/129‑1 (MQ=255) ggTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAg < 6:162019/135‑1 (MQ=255) gcgtcTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAGGc < 8:324725/134‑1 (MQ=255) cgtcTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAGGCt > 8:50082/1‑135 (MQ=255) | GTTAGATAGTAGCCCGGCGCCAAACCTTTGGCATGCAAGGATCGCGCAGGCCGAGGTAGGCCGATGGCGCTAATGGCATAGTGCTGTCGCATATGGGGCGGGTGCAGGTCGCAGCTGGATCAGGTCGTCTTGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAGGCT > ACB122/1934337‑1934596 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |