Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | ACB143 | 4,807,149 | G→C | 12.0% | S66T (AGC→ACC) | mcbC → | Microcin B17‑processing protein McbC |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | ACB143 | 4,807,149 | 0 | G | C | 12.0% | 414.0 / 6.2 | 144 | S66T (AGC→ACC) | mcbC | Microcin B17‑processing protein McbC |
Reads supporting (aligned to +/- strand): ref base G (85/38); new base C (2/17); total (87/57) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.47e-06 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 145 total aligned reads displayed.
GGCTTTCCATGCCAAAGGCAACTATACGATACACAAAGCAACTCAACACTTGAGCGCCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTGATATAGTCCAAGCATTGCTTGCACCGCTCTTAACT > ACB143/4807015‑4807282 | gtcTTTCCATGCCAAAGGCAACTATACGATACACAAAGCAACTCAACACTTGAGCGCCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAg < 6:204477/133‑1 (MQ=255) cTTTCCATGCCAAAGGCAACTATACGATACACAAAGCAACTCAACACTTGAGCGCCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAACACTCAATACCATTGTCGCCGCAAGCa > 6:76376/1‑135 (MQ=255) cTTTCCATGCCAAAGGCAACTATACGATACACAAAGCAACTCAACACTTGAGCGCCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCa > 7:106978/1‑135 (MQ=255) cTTTCCATGCCAAAGGCAACTATACGATACACAAAGCAACTCAACACTTGAGCGCCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCa > 1:250866/1‑135 (MQ=255) cTTTCCATGCCAAAGGCAACTATACGATACACAAAGCAACTCAACACTTAAGCGCCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCa > 8:122765/1‑135 (MQ=255) tCCATGAAAAAGTAAAATATACTATACAAAAAGCAACTAAACAGTTGAGCGCCCTGCACAAAATACCACCAAAAGACCTCGAAAAACTTACCGTAAACGAACTAAAACTCAATACATTTTTAGCCCAAAGAaaaa < 7:4256/135‑1 (MQ=255) gCAACTATACGATACACAAAGCAACTCAACACTTGAGCGCCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGAc > 5:189534/1‑136 (MQ=255) aaCTATACGATACACAAAGCAACTCAACACTTGAGCGCCCTGCACCAAATACCACCAACAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGActc < 2:221778/136‑1 (MQ=255) aacacAAACCAACTCAACACTTGAGCGCCCTGCACCAAAAACCACAAAAAGACCACCAAAAACTTACCGCAAACTAACTAAAACTCAATACCATTTTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACctct < 4:265226/135‑1 (MQ=255) acaAAGCAACTCAACACTTGAGCGCCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGc > 8:82045/1‑136 (MQ=255) acaAAGCAACTCAACACTTGAGCGCCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGc > 7:216929/1‑136 (MQ=255) acaAAGCAACTCAACACTTGAGCGCCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGc > 6:133817/1‑136 (MQ=255) acaAAGCAACTCAACACTTGAGCGCCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGc > 5:258877/1‑136 (MQ=255) acaAAGCAACTCAACACTTGAGCGCCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGc > 5:124363/1‑136 (MQ=255) acaAAGCAACTCAACACTTGAGCGCCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTAAACCTCTGGc > 1:18517/1‑136 (MQ=255) acaAAGCAACTCAACACTTGAGCGCCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACAGACTCTTACACCTCTGGc > 5:292541/1‑136 (MQ=255) aaaGCAACTCAACACTTGAGCGCCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGc > 6:159721/1‑134 (MQ=255) aaaGCAACTCAACACTTGAGCGCCCTGCACAAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAACCAAAAACAAAGAACCGACTCTTACACCTCTgtc > 8:60469/1‑132 (MQ=255) aaGCAACTCAACACTTGAGCGCCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAg > 1:100834/1‑136 (MQ=255) aaGCAACTCAACACTTGAGCGCCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAg > 2:43613/1‑136 (MQ=255) aaGCAACTCAACACTTGAGCGCCCTGCACCAAATACAACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAg > 8:159834/1‑136 (MQ=255) gCAACTCAACACTTGAGCGCCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGCCTCTTACACCTCTGGCGAGcc > 8:240677/1‑136 (MQ=255) gCAACTCAACACTTGAGCGCCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGcc > 8:80608/1‑136 (MQ=255) gCAACTCAACACTTGAGCGCCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGcc > 1:178767/1‑136 (MQ=255) aaCTCAACACTTGAGCGCCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTAACGGAAACGAACTAAAACTCAATACCATTGTAGCCCCACGCAAAAACCAAGAACCGACTCTTACACCTCTGGCGAGACca > 8:267719/1‑136 (MQ=255) aCTCAACACTTGAGCGCCCTGCACCAAATACCACCAAAACACCTCGAAAAACTTCCCGTAAACCAACTAAAACTCAATCCCATTGTACCCCCAACCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCcac < 4:172815/136‑1 (MQ=255) tCAACACTTGAGCGCCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCacac > 4:109676/1‑136 (MQ=255) cAACACTTGAGCGCCCTCCACAAAAAACCACCAACAGACCTCAAAAAAATTACCGAAACCCAAAAAAAACACAAACCCATTCTACCCCCACCCAAAAAAAAACACCCGACTCTTACACCTCTGGCGAGCCCACAcc < 2:142166/136‑1 (MQ=255) aaCACTTGAGCGCCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAACAACCGACTCTTACACCACTCGCGAGCCCACAccc > 8:32834/1‑136 (MQ=255) aaCACTTGAGCGCCCTCCACCAAATACCACCAAAAGACCTCGAAAATCTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGAAGCTTACACCTCTGGCGAGCCCACAccc > 8:214035/1‑136 (MQ=255) acTTTAGCGCCCTGCACAAAATACCACCAAAACACCTCAAAAAACTTACCTTAAACCAACAAAAACTAAATACCATTGTACCCCCAACCAAAAACAAACAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCt < 1:135928/136‑1 (MQ=255) ttGAGCGCCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACAGACTCTTACACCTCTGGCGAGCCCACACCCGCTAc > 2:45058/1‑136 (MQ=255) gcgcTGCACCAAATACCACCAAAAGACCACGAAAAACTTACCGGAAACGAACTAAAACTCAAAACCATTGTAGACCCAAGCAAAAACTAAGAACCGACTCTTACACATCTGGCGAGCCCACACCCGCAACgaaga > 2:3673/4‑135 (MQ=255) gcCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACgaaga > 3:33959/1‑135 (MQ=255) gcCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAAAAACATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACgaaga > 3:75357/1‑135 (MQ=255) gCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGt > 3:187967/1‑136 (MQ=255) aCCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGCGCCCACACCCGCTACGAAGAAATAGtt > 2:101161/1‑135 (MQ=255) aCCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGtt > 6:223521/1‑135 (MQ=255) aaTACCACCAAACCACCTCGAAAAAATTACCCTAAACGACATAAAACTCAATACCATTTTAGCCCCAACAAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGc < 8:151012/136‑1 (MQ=255) aaTACCACCAAAAGACCTCGAAAAACTTCCCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCACGCAAAAACAAACAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGc < 1:93032/136‑1 (MQ=255) aaTACCACCAAAACACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGAAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGc < 8:69113/136‑1 (MQ=255) accaccAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACCCCCGCTACGAAGAAATAGTGCATGCGaa > 4:2815/1‑136 (MQ=255) accaccAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGaa > 1:136783/1‑136 (MQ=255) caAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGAtt > 3:111066/1‑136 (MQ=255) caAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGAtt > 3:140959/1‑136 (MQ=255) caAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGAtt > 1:65524/1‑136 (MQ=255) caAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGAtt > 7:172021/1‑136 (MQ=255) caAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGAtt > 7:93913/1‑136 (MQ=255) caAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCACAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGAtt > 7:11561/1‑136 (MQ=255) caAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAAAACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGAtt > 4:247206/1‑136 (MQ=255) caAAACACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAACCAAAAACAAATAACCCACTATTACACATCAGGAGAGCCCACAACCGCTACGAAGACATAGTTCATCCGAAAGAt > 4:11744/1‑135 (MQ=255) gACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAg > 4:76189/1‑136 (MQ=255) gACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAg > 5:191308/1‑136 (MQ=255) gACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACAACCGCTACGAAGAAATAGATCATGCGAACGAATTCAAg > 4:227737/1‑136 (MQ=255) atctaaaaaCATACTGGAAAGCAAGAAAAACTCAATACATTTGTCGCCCAAATCAAATACAATTTACCGACTCTTACACCTCTGTCGAGCCCACACCCGCTACTAAGAAATAGTTCATGCTAACGATTTGAAGCAc < 4:194087/132‑1 (MQ=255) cGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGc > 6:238038/1‑136 (MQ=255) cGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGc > 6:18138/1‑136 (MQ=255) aaaaCTTCCCGCAAACCAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAACAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCct < 1:257257/136‑1 (MQ=255) aaaaCTTACCGGACACCAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCct < 2:35469/136‑1 (MQ=255) aaaaCTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGCGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCct > 6:87042/1‑136 (MQ=255) aaaaCTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTACATGCGAACGATTTGAAGCACGCCct > 5:269480/1‑136 (MQ=255) aaaaCTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAACAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCct < 3:16966/136‑1 (MQ=255) aaaaCTTACCGCAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCct < 1:38233/136‑1 (MQ=255) aaaaATTACTGCAAACTAAATAAAACTCAATACCATTGAAGCCCAAACAAAAAAAAAACAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCct < 4:161080/136‑1 (MQ=255) ctaaCCGCAAACGAACAAAAACTCAATACCATTCAACCCCCAACCAAAAACAACCAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTc < 3:141934/133‑1 (MQ=255) cTTACCGTAAACTAACTAAAACTCAATACCATTGTAGCCCCAACCAAAAACAAACAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTc < 3:279488/136‑1 (MQ=255) cGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACtat > 2:84891/1‑134 (MQ=255) ggAAACGAACTAAAACTCAATACCTTTGTAGCCCCAAGAAAAAACAAACAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTg < 7:32834/136‑1 (MQ=255) ggAAACGAACTAAAACTCAATACCATTGTCGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTg < 4:87632/136‑1 (MQ=255) ggAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTg < 2:246956/136‑1 (MQ=255) ggAAACGAACTAAAACTCAATACCATTGTAGCCCCAACCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTg < 5:55037/136‑1 (MQ=255) gcaacagAACTAAATCAAAATACCATTGTTGCCCATATCTATAAATAAGAACCGACTCTTACACCTCTGGAGATCCCAGACACGCTACGAAGAAATTGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTg < 2:272411/130‑1 (MQ=255) gcaaaCTAACTAAAACTCAATACCATTGTAGCCCCAAGAAAAAACAAACAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTg < 5:172474/134‑1 (MQ=255) tAAAACTCAATACCATTGTAGCCCAAAGAAAAAACAAAGACCCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTGATATAGTCCa < 4:81007/136‑1 (MQ=255) aaaaaCTCAATACAATTTTAGCCCCAAGAAAAAAAAAACAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTGATATAGTCCa < 2:139031/135‑1 (MQ=255) aaaCTCAATACCATTGTAGCCCCAAGAAAAAACAAACACCCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTGATATAGTCCa < 6:106662/134‑1 (MQ=255) tACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTGATATAGTCCAAGCAttgctt < 5:97395/136‑1 (MQ=255) aCCATTGTAGCCCCACGCAAAAACAAACAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTGATATAGTCCAAGCAttgcttg < 1:101273/136‑1 (MQ=255) aCCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTGATATAGTCCAAGCAttgcttg > 3:94497/1‑136 (MQ=255) aCCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTGATATAGTCCAAGCAttgcttg > 8:102668/1‑136 (MQ=255) tAGCCCCAAGCAAAAACAAAGACCCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTGATATAGTCCAAGCATTGCTTGCACCGct > 3:164302/1‑136 (MQ=255) tAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTGATATAGTCCAAGCATTGCTTGCACCGct > 4:194519/1‑136 (MQ=255) tAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTGATATAGTCCAAGCATTGCTTGCACCGct > 3:193278/1‑136 (MQ=255) tAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTGATATAGTCCAAGCATTGCTTGCACCGct > 7:221674/1‑136 (MQ=255) tAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTGATATAGTCCAAGCATTGCTTGCACCGct > 4:20800/1‑136 (MQ=255) tAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTGATATAGTCCAAGCATTGCTTGCACCGct > 6:178382/1‑136 (MQ=255) tAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGATCATGCGAACGATTTGAATCACGCCCTCTTCACTTAGATATAGTCCAAGCATTGCTTGCACCGct > 1:146830/1‑136 (MQ=255) tAGCCCAAAGAAAAACCCAATCACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGTAGCACGCCCTCTTCACTTTGATATAGTCCAAGCATTGCTTGCACCGc < 1:101994/135‑1 (MQ=255) aGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTGATATAGTCCAAGCATTGCTTGCACCGctc > 5:166325/1‑136 (MQ=255) ccAAGCAAAAACAAAGAACCGACTCTTACACctct < 6:52266/35‑1 (MQ=255) ccAAGCAAAAACAAAGAACCGACTCTTACACctct > 5:52266/1‑35 (MQ=255) ccAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTGATATAGTCCAAGCATTGCTTGCACCGCTCTTaa > 7:196570/1‑136 (MQ=255) ccAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTGATATAGTCCAAGCATTGCTTGCACCGCTCTTa > 2:185986/1‑135 (MQ=255) ccAAGCAAAAACAAAGAACAGACTCTTACACCTCTGGCGAGCCCACACCAGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTGATATAGTCAAAGCATTGCTTGCACCGCTCTTaa > 2:201315/1‑136 (MQ=255) cAAGCAAAAACAAAGAACCGACTCTTACACCTCTgg < 2:84428/36‑1 (MQ=255) cAAGCAAAAACAAAGAACCGACTCTTACACCTCTgg > 1:84428/1‑36 (MQ=255) aaGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTGATATAGTCCAAGCATTGCTTGCACCGCTCTTAACt < 6:55112/136‑1 (MQ=255) aaGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTGATATAGTCCAAGCATTGCTTGCACCGCTCTTAACt < 1:158597/136‑1 (MQ=255) aGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTg < 3:81488/100‑1 (MQ=255) aGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTGATATAGTCCAAGCATTGCTTGCACCGCTCTTAACt > 7:157191/1‑135 (MQ=255) | GGCTTTCCATGCCAAAGGCAACTATACGATACACAAAGCAACTCAACACTTGAGCGCCCTGCACCAAATACCACCAAAAGACCTCGAAAAACTTACCGGAAACGAACTAAAACTCAATACCATTGTAGCCCCAAGCAAAAACAAAGAACCGACTCTTACACCTCTGGCGAGCCCACACCCGCTACGAAGAAATAGTTCATGCGAACGATTTGAAGCACGCCCTCTTCACTTTGATATAGTCCAAGCATTGCTTGCACCGCTCTTAACT > ACB143/4807015‑4807282 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |