| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | ACB143 | 2191046 = | 0 (0.000) | 49 (1.060) +TAAGAGATATTTTCAG |
34/228 | 0.1 | 100% | intergenic (‑1/‑313) | PP_RS10045/purU_3 | LysR family transcriptional regulator/Formyltetrahydrofolate deformylase |
| ? | ACB143 | = 2191046 | NA (NA) | intergenic (‑1/‑313) | PP_RS10045/purU_3 | LysR family transcriptional regulator/Formyltetrahydrofolate deformylase | |||||
CGCATTAAGGTAATTAGAGAGCACTCAGAATCAGCATCTGTATGCGATTCCCGTAGCACTCAAGCCGTTCAGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < ACB143/2191177‑2191046‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGCTCGCCGCCTTGGAATGAGCCAGCCGATGGCGAGTGCGAGCCTCCGTAGGCTGCGG < ACB143/2191046‑2190911 |||||||||||||||| CGCATTAAGGTAATTAGAGAGCACTCAGAATCAGCATCTGTATGCGATTCCCGTAGCACTCAAGCCGTTCAGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGA > 1:314533/1‑137CGCATTAAGGTAATTAGAGACCACTCAGAATCAGCATCTGTATGCGATTCCCGTAGCACTCAAGCCGTTCAGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGA < 2:290499/137‑1 CATTAAGGTAATTAGAGAGCACTCAGAATCAGCATCTGTATGCGATTCCCGTAGCACTCAAGCCGTTCAGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGA > 8:189134/1‑137 AGGTAATTAGAGAGCACTCAGAATCAGCATCTGTATGCGATTCCCGTAGCACTCAAGCCGTTCAGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTT < 7:189134/137‑1 GTAATTAGAGAGCACTCAGAATCAGCATCTGTATGCGATTCCCGTAGCACTCAAGCCGTTCAGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTC < 3:75245/137‑1 TAGAGAGCACTCAGAATCAGCATCTGTATGCGATTCCCGTAGCACTCAAGCCGTTCAGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAAT > 8:21297/1‑137 TAGAGAGCACTCAGAATCAGCATCTGTATGCGATTCCCGTAGCACTCAAGCCGTTCAGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAAT > 4:203904/1‑137 GAGAGCACTCAAAATCAGCATCTGTATGCGATTCCCGTAGCACTCAAGCCGTTCAGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGG > 1:78397/1‑137 AGAGCACTCAGAATCAGCATCTGTATGCGATTCCCGTAGCACTCAAGCCGTTCAGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGA < 5:13860/137‑1 ACTCAGAATCAGCATCTGTATGCGATTCCCGTAGCACTCAAGCCGTTCAGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCTGAATGGATATCA > 1:308230/1‑137 ACTCAGAATCAGCATCTGTATGCGATTCCCGTAGCACTCAAGCCGTTCAGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCA > 1:129623/1‑137 TCAGAATCAGCATCTGTATGCGATTCCCGTAGCACTCAAGCCGTTCAGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGA > 3:162722/1‑137 GAATCAGCATCTGTATGCGATTCCCGTAGCACTCAAGCCGTTCAGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGA < 8:175386/137‑1 AGCATCTGTATGCGATTCCCGTAGCACTCAAGCCGTTCAGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGA < 3:85577/137‑1 CTGTATGCGATTCCCGTAGCACTCAAGCCGTTCAGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCA > 7:238022/1‑137 CTGTATGCGATTCCCGTAGCACTCAAGCCGATCAGCACCAATCTGATTACTAAAGTACGATAACAGATCCTAGATGAGAATCCGTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATAAGAagtca > 5:59063/1‑132 TTCCCGTAGCACTCAAGCCGTTCAGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCT > 3:55663/1‑137 CCGTAGCACTCAAGCCGTTCAGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAAT > 5:315516/1‑101 CCGTAGCACTCAAGCCGTTCAGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAAT < 6:315516/101‑1 CGTAGCACTCAAGCCGTTCAGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTT > 6:100812/1‑137 TAGCACTCAAGCCGTTCAGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCg > 6:122675/1‑136 AGCACTCAAGCCGTTCAGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTC < 8:254768/137‑1 ACTCAAGCCGTTCAGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGAT < 4:156708/137‑1 CAAGCCGTTCAGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAG > 7:279081/1‑137 AGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGG > 5:333794/1‑137 AGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGG > 7:126248/1‑137 AACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAA < 3:203904/137‑1 TGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCT > 7:28578/1‑137 TGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAG < 3:15718/132‑1 TGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAG > 4:15718/1‑132 ATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCT < 2:314533/137‑1 ACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCc > 1:327229/1‑136 TAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCT > 5:224242/1‑137 AGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGAT > 2:189857/1‑104 AGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGAT < 1:189857/104‑1 TACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGC < 3:26114/137‑1 TACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGC < 2:13909/137‑1 GCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGCTCGCCGCC > 1:177411/1‑137 GCGCTCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGCTCGCCGCC > 1:6529/1‑137 TCCTAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGCTCGCCGCCTTGG > 4:181916/1‑137 TAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGCTCGCCGCCTTGGAAT < 4:162722/137‑1 TAGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGCTCGCCGCCTTGGAAT > 2:183144/1‑137 AGATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGCTCGCCGCCTTGGAATG < 5:100812/137‑1 GATGAGAATCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGCTCGCCGCCTTGGAATGt > 3:83571/1‑136 TCCCTTAAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGCTCGCCGCCTTGGAATGAGCCAGCCG > 6:34217/1‑137 AAATAACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGCTCGCCGCCTTGGAATGAGCCAGCCGATGGCG > 6:95950/1‑137 ACAATAAGTGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGCTCGCCGCCTTGGAATGAGCCAGCCGATGGCGAGTGC < 2:164227/137‑1 ACAATAAGAGATATTTTCAGAATGGTTATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGCTCGCCGCCTTGGAATGAGCGAGCCGATGGCGAGTGC < 2:50378/137‑1 ACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGCTCGCCGCCTTGGAATGAGCCAGCCGATGGCGAGTGC < 3:181916/137‑1 ACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGCTCGCCGCCTTGGAATGAGCCAGCCGATGGCGAGTGC < 5:249235/137‑1 ACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGCTCGCCGCCTTGGAATGAGCCAGCCGATGGCGAGTGC < 7:27874/137‑1 ACAATAAGAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGCTCGCCGCCTTGGAATGAGCCAGCCGATGGCGAGTGC < 1:41126/137‑1 ACAATAACAGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGCTCGCCGCCTTGGAATGAGCCAGCCGATGGCGAGTGC < 2:292187/137‑1 ACAAAAAGAGATATATTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGCTCGCCGCCGTGGAATGAGCCAGCCGATGGCGAGTGC < 6:279600/137‑1 AGATCTTTTCAGAATGGCTATCAGAAGAGTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGCTCGCCGCCTTGGAATGAGCCAGCCGATGGCGAGTGCGAGCCTCC < 4:264451/137‑1 AGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGCTCGCCGCCTTGGAATGAGCCAGCCGATGGCGAGTGCGAGCCTCC < 7:142032/137‑1 AGATATTTTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGCTCGCCGCCTTGGAATGAGCCAGCCGATGGCGAGTGCGAGCCTCC < 8:279081/137‑1 TTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGCTCGCC < 2:36457/91‑1 TTCAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGCTCGCC > 1:36457/1‑91 CAGAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGCTCGCCGCCTTGGAATGAGCCAGCCGATGGCGAGTGCGAGCCTCCGTAGGCTGC < 1:183144/137‑1 GAATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGCTCGCCGCCTTGGAATGAGCCAGCCGATGGCGAGTGCGAGCCTCCGTAGGCTGCGG < 6:224242/137‑1 |||||||||||||||| CGCATTAAGGTAATTAGAGAGCACTCAGAATCAGCATCTGTATGCGATTCCCGTAGCACTCAAGCCGTTCAGAACCCAACTGATTACTAAAGTACGGTAAGCGCTCCTAGATGAGAATCCCTTAAATAACAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < ACB143/2191177‑2191046‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATGGATATCAGAAGATTAGACCTCAATTTGCTGCTCCTTCTCGATGAGCTGTACCGGGAACAGAACCTCTCCGCTGCCGCTCGCCGCCTTGGAATGAGCCAGCCGATGGCGAGTGCGAGCCTCCGTAGGCTGCGG < ACB143/2191046‑2190911 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |