| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | ACB143 | 4,901,237 | (CCGTTG)5→4 | coding (99‑104/198 nt) | CJ019_04595 ← | hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | ACB143 | 4901215 = | 2 (0.040) | 27 (0.600) | 19/206 | 0.9 | 95.5% | coding (126/198 nt) | CJ019_04595 | hypothetical protein |
| ? | ACB143 | = 4901208 | 1 (0.020) | coding (133/198 nt) | CJ019_04595 | hypothetical protein | |||||
CCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < ACB143/4901362‑4901215‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacggcaacggcaacggcaacggcaacAGCAACAGCAACAACAGCACAGTACAGTTTTGCCTTGTTATTTCCATTGACTGTACTGGCCGGTGACTCCGCATAATGACGCCTCGAATTCACCCGGAGGTGGCATGAGCAAGACAGTCC < ACB143/4901208‑4901089 CCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAAC > 4:262339/1‑136CCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACATCAACGGCAACGGCAAC > 7:291554/1‑136CCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATAAATATCAAGATAAACGGCAACGGCAcc > 5:43146/1‑134CCTCAGCGCTTGACGAGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAAC > 5:332801/1‑136 CTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACG < 3:105170/136‑1 GCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAA > 8:107611/1‑136 CGCTTGACGGGCATCCATGCCCGTCCCCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAAC > 6:307404/1‑136 CGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAAC < 1:66341/136‑1 CGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACCGCAACGGCAACGGCAAC < 6:106591/136‑1 CGCTTGAAGTTCATCCATGCCCGTCACCTGCCTCCGCAAGGCCTTCTTTCTGCCTCCTGAAGTCGCGAATATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAAC < 8:100133/136‑1 GCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACG > 2:220639/1‑136 TGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGGCGCGAAGATCAAGATCAAGATCAAGATCAAGCTCAAGAGCAAGATCCAGATCAACGGCCACGGCCACGGCCACGGCA > 6:214265/1‑136 ACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAA < 4:290885/135‑1 CGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCTGCGTTCTGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACA < 7:6303/136‑1 gtaACCTGGCTCCGAATGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATAAAGATCAACGGCAACGGCAACGGCAACGGCAACAGCAACAGCAACAACA < 4:5398/133‑1 gcacCCTGCCGCCCCAAGGCCGGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGCTCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACAGCAACAGCAACAACA < 2:230999/132‑1 GTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACAGCAACAGCAACAACA < 5:96825/136‑1 GTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACAGCAACAGCAACAACA < 7:166429/136‑1 GTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACAGCAACAGCAACAACA < 6:219339/136‑1 GTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACAGCAACAGCAACAACA < 7:167764/136‑1 GTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACAGCAACAGCAACAACA < 3:275378/136‑1 ACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGAAACAGCAAAAGCAACAACAGCA > 6:309171/1‑136 CCTGCCTCCGCAAGGCCTTCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGCTCAAGATCAAGATCAACGGCAACGTCAACGGCAACGGCAACAGCAACAGCACAACCAGCA > 4:245163/1‑135 CTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACAGCAACAGCAACAACAGCACA < 7:107611/136‑1 AAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACAGCAACAGCAACAACAGCACAGTACAGTTTT < 2:211777/136‑1 AAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACAGCAACAGCAACAACAGCACA > 7:282836/1‑126 AAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATAAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACAGCAACAGCAACAACAGCACA < 8:282836/126‑1 CGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACAGCAACAGCAACAACAGCACAGTACAGTTTTGCCTTGTTATT < 5:307404/135‑1 GCCTCCTGAAGTCGCGAATATCAAGATCAAGATCAATATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACAGCAACAGCAACAACAGCACAGTACAGTTTTGCCTTGTTATTTCC < 5:44679/136‑1 CTCCTGAAGTCGCTAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACAGCAACAGCAACAACAGCACAGTACAGTTTTGCCTTGTTATTTCCAT < 2:235170/136‑1 CTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACAGCAACAGCAACAACAGCACAGTACAGTTTTGCCTTGTTATTTCCAT < 1:249129/136‑1 AAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGTCAACGGCAACGGCAACAGCAACAGCAACAACAGCACAGTACAGTTTTGCCTTGTTATTTCCATTGACTGTACTGGCC < 5:329350/136‑1 AGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACAGCAACAGCAACAACAGCACAGTTCAGTTTTGCCTTGTTATTTCCATTGACTGTACTGGCCG > 3:152310/1‑136 cgAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACAGCAACAGCAACAACAGCACAGTACAGTTTTGCCTTGTTATTTCCATTGACTGTACTGGCCGGTG < 5:75899/134‑1 CAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACAGCAACAGCAACAACAGCACAGTACAGTTTTGCCTTGTTATTTCCATTGACTGTACTGGCCGGTGACTCCGCATAAT > 1:224063/1‑135 TCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACAGCAACAGCAACAACAGCACAGTACAGTTTTGCCTTGTTATTTCCATTGACTGTACTGGCAGGTGACTCCGCATAATGACGac > 3:44302/1‑134 TCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACAGCAACAGCAACAACAGCACAGTAAAGTTTTGCCTTGTTAATTCAATTGACTGTACTGGCCGGTGACTCCGCTTAATGACGCCTCGAAT > 3:19087/1‑136 AAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAACAGCAACAGCAACAACAGCACAGTACAGTTTTGCCTTGTTATTTCCATTGACTGTACTGGCCGGTGACTCCGCATAATGACGCCTCGAATTC < 7:190434/136‑1 ATCAAGATCAACGGCAACGGCAACGGCAACGGCAACAGCAACAGCAACAACAGCACAGTACAGTTTTGCCTTGTTATTTCCATTGACTGTACTGGCCGGTGACTCCGCATAATGACGCCTCGAATTCACCCGGAGG > 3:263582/1‑136 TCAAGATCAACGGCAACGGCAACGGCAACGGCAACAGCAACAGCAACAACAGCACAGTACAGTTTTGCCTTGTTATTTCCATTGACTGTACTGGCCGGTGACTCCGCATAATGACGCCTCGAATTCACCCGGAGGT < 5:140869/136‑1 CAACGGCAACGGCAACGGCAACGGCAACAGCAACAGCAACAACAGCACAGTACAGTTTTGCCTTGTTATTTCCATTGACTGTACTGGCCGGTGACTCCGCATAATGACGCCTCGAATTCACCCGGAGGTGGCAT > 5:75407/1‑134 CGGCAACGGCAACGGCAACTGCAACAGCAACAGCAACAACAGCACAGTACAGTTTTGCCTTGTTATTTCCATTGACTGTACTGGCCGGTGACTCCGCATAATGACGCCTCGAATTCACCCGGAGGTGGCATGAGCA < 8:291554/136‑1 CGGCAACGGCAACGGCAACGGCAACAGCAACAGCAACAACAGCACAGTACAGTTTTGCCTTGTTATTTCCATTGACTGTACTGGCCGGTGACTCCGCATAATGACGCCTCGAATTCACCCGGAGGTGGCATGAGCA < 4:263582/136‑1 CGGCAACGGCAACGGCAACGGCAACAGCAACAGCAACAACAGCACAGTACAGTTTTGCCTTGTTATTTCCATTGACTGTACTGGCCGGTGACTCCGCATAATGACGCCTCGAATTCACCCGGAGGTGGCATGAGCA < 2:269181/136‑1 CAACGGCAACGGCAACAGCAACAGCAACAACAGCACAGTTCAGTTTTGCCTTGTTATTTCCATTGACTGTACTGGCCGGTGACTCCGCATAATGACGCCTCGAATTCACCCGGAGGTGGCATGAGCAAGACAGTCC < 4:152310/136‑1 CCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACGGCAACGGCAACGGCAACGGCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < ACB143/4901362‑4901215‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacggcaacggcaacggcaacggcaacAGCAACAGCAACAACAGCACAGTACAGTTTTGCCTTGTTATTTCCATTGACTGTACTGGCCGGTGACTCCGCATAATGACGCCTCGAATTCACCCGGAGGTGGCATGAGCAAGACAGTCC < ACB143/4901208‑4901089 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |