New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	ACB143	3359593 =	44 (1.000)	11 (0.250)	9/240	NT	26.0%	intergenic (+219/‑151)	pikAII_1/CJ019_03160	Narbonolide/10‑deoxymethynolide synthase PikA2,modules 3 and 4/Tn3 family transposase ISPa42
	?	ACB143	5345402 =	19 (0.430)					coding (2034/2106 nt)	pnp	Polyribonucleotide nucleotidyltransferase

AGCGAGGCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  ACB143/3359728‑3359593 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCAGTACAAGCACTTCAACTTCCTGGCCTTCCTTGAGGATGTCGGTGACTTTCTCGACGCGAGCATCGCTCAGCATGGAGATGTGCACCAAACCGTCCTTGCCAGGCAGGATGTTGACGAAGGCGCCGAAGTCG  >  ACB143/5345402‑5345534                                                                                                                                                                                                                                                                               AGCGAGGCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATACCCCC                                                                                                                                       >  8:204188/1‑136     AGGCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCCAGT                                                                                                                                   <  4:205474/136‑1       GCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCCAGTAC                                                                                                                                 <  2:288999/136‑1          AAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATATCGGCATAACCCCCAGTACAAG                                                                                                                              >  5:124143/1‑136                           GGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCCAGTACAAGCACTTCAACTTCCTGGC                                                                                                             >  4:99300/1‑136                                 CCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCCAGTACAAGCACTTCAACTTCCTGGCCTTCCT                                                                                                       >  5:249539/1‑136                                  CAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCCAGTACAAGCACTTCAACTTCCTGGCCTTCCTT                                                                                                      >  2:206269/1‑136                                  CAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCCAGTACAAGCACTTCAACTTCCTGGCCTTCCTT                                                                                                      >  4:149336/1‑136                                                            GGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCATTATCTCGGCATAACACCCAGTACAAGCACTTCAGCTTCCTGGCCTTCCGTTCTGATGTCGGTGACTTGCTCGACGC                                                                            >  4:183234/1‑136                                                                   CGACTAACCTTTTAAATCATATATTTACCGAACGAATGTCCTAATTTTTGCATTATCTCGGCATAACCACCAGTACAAGCACTTCAACTTCCTGGCCTTCCTTGAGGATGTCGGTGACTTTCTCGACGCGAGCATC                                                                     <  8:223579/136‑1                                                                    GAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCCAGTACAAGCACTTCAACTTCCTGGCCTTCCTTGAGGATGTCGGTGACTTTCTCGACGCGAGCATC                                                                     <  5:79048/135‑1                                                                    GAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCAAATTTTTGCCTTATCTCGGCATAACCCCCACTACAAGCACTTCAACTTCATGGCCTTCCTTGAGGATGTCGGTGACTATCTCGACGCGAGCATCG                                                                    >  6:236261/1‑136                                                                               TAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCCAGTACAAGCACTTCAACTTCCTGGCCTTCCTTGAGGATGTCGGTGACTTTCTCGACGCGAGCATCGCTCAGCATG                                                           >  7:63435/1‑134                                                                                                                                      CCCCAGTACAAGCACTTCAACTTCCTGGCCTTCCTTGAGGATGTCGGTGACTTTCTCGACGCGAGCATCGCTCAGCATGGAGATGTGCACCAAACCGTCCTTGCCAGGCAGGATGTTGACGAAGGCGCCGAAGTCG  <  5:253614/136‑1                                                                                                                                                                                                                                                                               AGCGAGGCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  ACB143/3359728‑3359593 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCAGTACAAGCACTTCAACTTCCTGGCCTTCCTTGAGGATGTCGGTGACTTTCTCGACGCGAGCATCGCTCAGCATGGAGATGTGCACCAAACCGTCCTTGCCAGGCAGGATGTTGACGAAGGCGCCGAAGTCG  >  ACB143/5345402‑5345534

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.