New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	ACB143	2155685 =	59 (0.960)	52 (0.850)	39/260	0.2	46.9%	coding (301/369 nt)	tmk_1	Thymidylate kinase
	?	ACB143	= 2220562	59 (0.960)					coding (36/369 nt)	tmk_2	Thymidylate kinase

GCTTGGAAACAGCTTTGAGCAATGCTACGCTGCCATGATCTACGCTGAATCGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  ACB143/2155820‑2155685 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATAGGCCTATTATACGTTCCTTACTAAGAATGTAAACATGAGTTCTACATCCCTCTAACCCCCGAAATTCGGGGCCTGGAGCCAAAAATGCCAACCATCAT  <  ACB143/2220562‑2220428                                                                                                                                                                                                                                                                                 GCTTGGAAACAGCTTTGAGCAATGCTACGCTGCCATGATCTACGCTGAATCGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGG                                                                                                                                        >  3:249928/1‑137        AACAGCTTTGAGCAATGCTACGCTGCCATGATCTACGCTGAATCGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTT                                                                                                                                 >  7:153294/1‑137         ACAGCTTTGAGCAATGCTACGCTGCCATGATCTACGCTGAATCGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTG                                                                                                                                <  8:13412/137‑1          CAGCTTTGAGCAATGCTACGCTGCCATGATCTACTCTGAATCGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTTAGCATTAAAAGAATATAGCGCGTCTTGT                                                                                                                               <  2:129616/137‑1                     AATGCTACGCTGCCATGATCTACGCTGAATCGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTG                                                                                                                    <  5:76899/137‑1                      ATGCTACGCTGCCATGATCTACGCTGAATCGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGA                                                                                                                   <  8:28312/137‑1                          TACGCTGCCATGATCTACGCTGAATCGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAA                                                                                                               >  1:111489/1‑137                           ACGCTGCCATGATCTACGCTGAATCGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAA                                                                                                              <  6:152066/137‑1                               TGCCATGATCTACGCTGAATCGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTA                                                                                                          >  8:222996/1‑137                                GCCATGATCTACTCTGAATCGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAA                                                                                                         <  3:69742/137‑1                                   ATGATCTACGCTGAATCGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACA                                                                                                      <  7:222996/137‑1                                    TGATCTACGCTGAATCGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCTTCTTGTATTCGTTCTTGAGTAAATGTAAACAT                                                                                                     >  8:119516/1‑137                                    TGATCTACGCTGAATCGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACAT                                                                                                     <  7:290396/137‑1                                     tATCTACGCTGAATCGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATA                                                                                                    <  1:323515/136‑1                                     GATCTACGCTGAATCGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATA                                                                                                    <  3:34069/137‑1                                     GATCTACGCTGAATCGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATA                                                                                                    <  2:327394/137‑1                                     GATCTACGCTGAATCGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATA                                                                                                    <  1:289507/137‑1                                      ATCTACGCTGAATCGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAAAATAG                                                                                                   >  1:1001/1‑137                                          ACGCTGAATCGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTTTATTCGTTCTTGAGTAAATGTAAACATAGGCCT                                                                                               <  8:328841/137‑1                                            GCTGAATCGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAATAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTTAATGTAAACATAGGCCTAT                                                                                             <  7:314875/137‑1                                              TGAATCGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATAGGCCTATTA                                                                                           >  1:331345/1‑137                                              TGAATCGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATAGGACTATTA                                                                                           >  5:225608/1‑137                                              TGAATCGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAAAATAGGCCTATTt                                                                                           >  7:360726/1‑136                                              TGAATCGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAAGATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATATGCGTATTt                                                                                           >  3:215416/1‑136                                                 ATCGCCTGATTTTACTGGCTTAGGCTACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCTTCTTGTATTCGTTGTTTAGTAAATGTAAACATAGGCCTATTATAC                                                                                        <  6:280127/137‑1                                                   CGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATAGGACTATTATACGT                                                                                      >  4:101351/1‑137                                                        GATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATAGGCCTATTATACGTTCCTT                                                                                 >  6:180371/1‑137                                                        GATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGC                                                                                                                                      >  4:355113/1‑84                                                        GATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGC                                                                                                                                      <  3:355113/84‑1                                                        GATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACATTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATAGGCCTATTATACGTTCCTT                                                                                 >  1:247197/1‑137                                                         ATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATAGGCCTATTATACGTTCCTTA                                                                                >  7:149655/1‑137                                                             TACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACAGAGGCCTATTATACGTTCCTTACTAA                                                                            >  8:86787/1‑137                                                              ACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATAGGCCTATTATACGTTCCTTACTAAG                                                                           <  6:81880/137‑1                                                                 GGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAATAATATAGGGCGTCTTGTTTTCGTTCTTGATTAAATGTAAAAATAGGCCTATTATACGTTCATTACTAAGAAa                                                                        >  1:329627/1‑136                                                                 GGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATAGGCCTATTATACGTTCCTTACTAAGAAT                                                                        <  8:153294/137‑1                                                                      AGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACA                                                                                                      <  7:156755/102‑1                                                                      AGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACA                                                                                                      >  8:156755/1‑102                                                                              AAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATAGGCCTATTATACGTTCCTTACTAAGAATGTAAACATGAGTT                                                           <  5:180371/137‑1                                                                               AACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAAGATAGGGCGTCTTCTATTCGTTCTTGAGTAAATGTAAACATAGGCCTATTATACGTTCCTTACTAAGAATGTAAACATGAGTTa                                                          >  8:281285/1‑136                                                                                ACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATAGGCCTATTATACGTTCCTTACTAAGAATGTAAACATGAGTTCT                                                         <  5:67727/137‑1                                                                                ACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATAGGCCTATTATACGTTCCTTACTAAGAATGTAAACATGAGTTCT                                                         <  5:62031/137‑1                                                                                ACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATAGGCCTATTATACGTTCCTTACTAAGAATGTAAACATGAGTTCT                                                         <  2:176283/137‑1                                                                                ACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATAGGCCTATTATACGTTCCTTACTAAGAATGTAAACATGAGTTCT                                                         <  2:331345/137‑1                                                                                ACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATAGGCCTATTATACGTTCCTTACTAAGAATGTAAACATGAGTTCT                                                         <  3:97057/137‑1                                                                                             TCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATAGGCCTATTATACGTTCCTTACTAAGAATGTAAACATGAGTTCTACATCCCTCTAAC                                            >  4:168692/1‑137                                                                                              CAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATAGGCCTATTATACGTTCCTTACTAAGAATGTAAACATGAGTTCTACATCCCTCTAACC                                           >  6:122927/1‑137                                                                                               AAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGCATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATAGGCCTATTATACGTTCCTTACTAAGAATGTAAACATGAGTTCTACATCCCTCTAACCC                                          >  2:240618/1‑137                                                                                                                          ATTAAAAGAATATAGGGCGTCTAGTATTCGTTATTGAGTAAATGTAAACATAGGCCTATTATACGTTACTTACTAAGAATGTAAACATGAGTTCTACATCCCTCTAACCACCGAAATTCGGGGCCTGGAGCCAAAAA               >  5:386056/1‑137                                                                                                                           TTAAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATAGGCCTATTATACGTTCCTTACTAAGAATGTAAACATGAGTTCTACATCCCTCTAACCCCCGAAATTCGGGGCCTGGAGCCAAAAAT              <  7:79970/137‑1                                                                                                                             AAAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATAGGCCTATTATACGTTCCTTACTAAGAATGTAAACATGAGTTCTACATCCCTCTAACCCCCGAAATTCGGGGCCTGGAGCCAAAAATGC            <  4:249928/137‑1                                                                                                                              AAAGAATATAGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATAGGCCTATTATACGTTCCTTACTAAGAATGTAAACATGAGTTCTACATCCCTCTAACCCCCGAAATTCGGGGCCTGGAGCCAAAAATGCC           <  6:225608/137‑1                                                                                                                                       AGGGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATAGGCCTATTATACGTTCCTTACTAAGAATGTAAACATGAGTTCTACATCCCTCTAACCCCCGAAATTCGGGGCCTGGAGCCAAAAATGCCAACCATCAT  >  7:9513/1‑137                                                                                                                                                                                                                                                                                 GCTTGGAAACAGCTTTGAGCAATGCTACGCTGCCATGATCTACGCTGAATCGCCTGATTTTACTGGCTTAGGCGACCAAACCTAGCTCACCATCAAATTTCTCTTCATGTTTACCTTGAGCATTAAAAGAATATAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  ACB143/2155820‑2155685 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCGTCTTGTATTCGTTCTTGAGTAAATGTAAACATAGGCCTATTATACGTTCCTTACTAAGAATGTAAACATGAGTTCTACATCCCTCTAACCCCCGAAATTCGGGGCCTGGAGCCAAAAATGCCAACCATCAT  <  ACB143/2220562‑2220428

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.