| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | ACB143 | = 2930727 | 4 (0.070) | 39 (0.660) | 19/238 | NT | 90.8% | intergenic (+44/+39) | nanT_2/CJ019_02768 | Sialic acid transporter NanT/IS110 family transposase ISPpu9 |
| ? | ACB143 | 3819889 = | NA (NA) | intergenic (‑13/+386) | CJ019_03622/CJ019_02768 | IS110 family transposase ISPpu9/IS110 family transposase ISPpu9 | |||||
GTGGTACCCGATCGTGATTGCCGTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > ACB143/2930593‑2930727‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCA > ACB143/3819889‑3820022 GTGGTACCCGATCGTGATTGCCGTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCgc > 3:70975/1‑134GTGGTACCCGATCGTGATTGCCGTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTT > 6:61415/1‑136 ggaACCCGATCGTGATTGCCGTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTTC > 7:373044/4‑135 GGTACCCGATCGTGATTGCCGTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTTC > 7:384639/1‑135 CCGATCGTGATTGCCGTGATGACAGCGGTGCTGGGGATCTTCTTCCTTCCTGAGACCAAAGATCGTGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGATCCCGCTTCTATCAA < 1:356724/136‑1 GATCGTGATTGCCGTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTTCTATCAAA > 4:111553/1‑135 GATCGTGATTGCCGTGATGACAGCGGTGCTGCGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCATCGCCGGTGAACCCGCTTCGATCAAA > 2:145497/1‑135 GTGATTGCCGTGATGACAGCGGTGCTGGGTATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTTCTATCAAACAAAA < 4:360917/136‑1 TGATTGCCGTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTTCTATCAAACAA > 6:158751/1‑133 TGATTGCCGTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTTCTATCAAACAA > 2:36417/1‑133 TTGCCGTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATA < 1:151285/136‑1 CCGTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAAC < 3:99020/135‑1 TGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCG > 4:179850/1‑135 CCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGC < 2:256022/134‑1 CCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCGTCTATAAAACAAAAGAAAACCCACTTTTCTTTGTAGCGCAAAAAACAGGCGCGCGGGGTCA > 4:217823/1‑134 AAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGG > 1:23299/1‑136 AGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGTGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCG < 8:318417/136‑1 AGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCG < 4:74445/136‑1 ATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGATAAAAACAGGCGCGCGGGGTCATTGGCGGC > 5:151270/1‑136 ATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGC < 5:35816/136‑1 GGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGA < 2:23299/135‑1 GATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGT < 4:158828/136‑1 TATCACTCACCCCTGAAGGTCGAGTTGGCCTGTGCCGGCCCCTTCGCGGGGGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGGGT < 5:100332/136‑1 TATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGT < 8:373044/136‑1 TATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGT < 3:77476/136‑1 TATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGT < 3:111553/136‑1 TATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGT < 1:342818/136‑1 TATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGT < 1:36417/136‑1 ATCACTCACACCTGAAGGGCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTT < 8:248814/136‑1 TCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTT < 5:63592/135‑1 CCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCTATGGCGGCGAAGTGTTGCCTCTTGTA > 3:43492/1‑136 CCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCTTCTATAAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTAACTCTTCTA > 5:4772/1‑136 GGCCCCTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCG < 5:158751/136‑1 GGCCCCTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGGCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCG < 7:328536/136‑1 GCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCCCTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGAT > 5:144258/1‑135 GCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGAT > 2:298073/1‑135 GCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGAT > 7:357533/1‑135 AACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAACAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCG < 1:309468/136‑1 AACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCG < 7:54322/136‑1 AACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCC < 7:160400/135‑1 AACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCC < 3:244316/135‑1 AACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCC < 3:289979/135‑1 AACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCC < 3:387491/135‑1 CCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTCACGCCGATG > 2:376481/1‑136 CGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGGCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGC < 2:347264/136‑1 CTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCA > 5:219488/1‑136 GTGGTACCCGATCGTGATTGCCGTGATGACAGCGGTGCTGGGGATCTTCTTCCTGCCTGAGACCAAAGATCGGGATATCACTCACACCTGAAGGTCGAGTTTGCCTGTGCCGGCCCCTTCGCGGGTGAACCCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > ACB143/2930593‑2930727‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCA > ACB143/3819889‑3820022 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |