New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	ACB143	1237160 =	35 (0.590)	13 (0.220)	11/236	NT	18.6%	coding (378/675 nt)	rnt	Ribonuclease T
	?	ACB143	2170757 =	79 (1.360)					intergenic (‑772/‑65)	arsR1/CJ019_02060	Arsenic resistance transcriptional regulatorArsR1/IS1182 family transposase ISPpu16

CGGCCGCACTTGAGTTCACCGGGATCAAGCTGGACCACCCGCTGCGCATGGCGGTCAGCGAGGAAAGCGCGATGACCGACATCTTCCGTGGCGTGCGCAAGGCACTCAAGGCCAACGGCTGCAAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  ACB143/1237287‑1237160 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggTCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGGGGACAATCATGAAGCGATTCATCGAAGGTGAGGCTCGAACGCAGGTTACATTGCTGCCGGAGTGCC  >  ACB143/2170757‑2170879                                                                                                                                                                                                                                                             CGGCCGCACTTGAGTTCACCGGGATCAAGCTGGACCACCCGCTGCGCATGGCGGTCAGCGAGGAAAGCGCGATGACCGACATCTTCCGTGGCGTGCGCAAGGCACTCAAGGCCAACGGCTGCAAGCGGTCCAGACT                                                                                                                     >  1:368040/1‑136               TTCACCGGGATCAAGCTGGACCACCCGCTGCGCATGGCGGTCAGCGAGGAAAGCGCGATGACCGACATCTTCCGTGGCGTGCGCAAGGCACTCAAGGCCAACGGCTGCAAGCGGTCCAGACTGTGTGAAAACGCCC                                                                                                       <  5:113725/136‑1                     GGGATCAAGCTGGACCACCCGCTGCGCATGGCGGTCAGCGAGGAAAGCGCGATGACCGACATCTTCCGTGGCGTGCGCAAGGCACTCAAGGCCAACGGCTGCAAGCGGTCCAGACTGTGTGAAAACGCCCGCGGTT                                                                                                 >  2:6447/1‑136                     GGGATCAAGCTGGACCACCCGCTGCGCATGGCGGTCAGCGAGGAAAGCGCGATGACCGACATCTTACGTGGCGTGCGCAAGGCACTCAATGCCAACGGCTGCAAGCGGTCAAGACTGTGTGAAACCGCCCGCGGTT                                                                                                 >  8:91573/1‑136                                 GACCACCCGCTGCGCATGGCGGTCATCGAGGAACGCGCGAGGACCGACATGTTGCGTGGCGTGCGCAAGGCACTCAAGGCCAACGGCTGCAAGCGGTCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTT                                                                                       <  2:376873/134‑1                                    CACCCGCTGCGCATGGCGGTCAGCGAGGAAAGCGCGATGACCGACATCTTCCGTGGCGTGCGCAAGGCACTCAAGGCCAACGGCTGCAAGCGGTCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGT                                                                                  >  4:175061/1‑136                                                   GCGGTCAGCGAGGAAAGCGCGATGACCGACATCTTCCGTGGCGTGCGCAAGGCACTCAAGGCCAACGGCTGCAAGCGGTCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGG                                                                    <  2:368040/135‑1                                                            GAGGAAAGCGCGATGACCGACATCTTCCGTGGCGTGCGCAAGGCACTCAAGGCCAACGGCTGCAAGCGGTCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGGGGACAATCAT                                                          >  7:120193/1‑136                                                            GAGGAAAGCGCGATGACCGACATCTTCCGTGGCGTGCGCAAGGCACTCAAGGCCAACGGCTGCAAGCGGTCCAGACTGTGTGAAAACGCCCGCGGTGGTCTAACCTTCTGGTCGTCGTGACCGTGGGGACAATCAT                                                          >  5:296069/1‑136                                                                              GACATCTTCCGTGGCGTGCGCAAGGCACTCAAGGCCAACGGCTGCAAGCGGTCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGGGGACAATCATGAAGCGATTCATCGAAGG                                        <  6:317781/136‑1                                                                                          GGCGTGCGCAAGGCACTCAAGGCCAACGGCTGCAAGCGGTCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGGGGACAATCATGAAGCGATTCATCGAAGGTGAGGCTCGAAC                            >  5:27512/1‑136                                                                                                            AAGGCCAACGGCTGCAAGCGGTCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGGGGACAATCATGAAGCGATTCATCGAAGGTGAGGCTCGAACGCAGGTTACATTGCTGC           <  1:30255/135‑1                                                                                                                    CGGCTGCAAGCGGTCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGGGGACAATCATGAAGCGATTCATCGAAGGTGAGGCTCGAACGCAGGTTACATTGCTGCCGGAGTGCC  >  8:146003/1‑136                                                                                                                                                                                                                                                             CGGCCGCACTTGAGTTCACCGGGATCAAGCTGGACCACCCGCTGCGCATGGCGGTCAGCGAGGAAAGCGCGATGACCGACATCTTCCGTGGCGTGCGCAAGGCACTCAAGGCCAACGGCTGCAAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  ACB143/1237287‑1237160 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggTCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGGGGACAATCATGAAGCGATTCATCGAAGGTGAGGCTCGAACGCAGGTTACATTGCTGCCGGAGTGCC  >  ACB143/2170757‑2170879

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.