New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	ACB143	= 4195578	34 (0.570)	5 (0.090)	5/234	NT	10.4%	coding (5826/6624 nt)	CJ019_03944	hypothetical protein
	?	ACB143	4300622 =	53 (0.920)					coding (440/1425 nt)	CJ019_04036	hypothetical protein

ACATCAGCCATCGCTGCATCGACCTTCAGGCGCTCCGCTTCATGCGCAGCATCGATAACCGCTTGCTTGGCTCTCGACTCAGAGAGAAGCTCCGTCAAATGCTGATGAACCTTTTCCGCCGTCCCTACGGCATCAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  ACB143/4195441‑4195578 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accTGCTCGCGGCTTTCGTCGATGGCGCCTTGCAACGCAGTCGACTTGCCGACAATCCGGTGATCACGCTGGAGGCGAGCCCGGCAACGCTGACCACATCGAAACTGAAACTGCTCCGCGCTCGCGTCAATCGCATCA  >  ACB143/4300622‑4300756                                                                                                                                                                                                                                                                                   ACATCAGCCATCGCTGCATCGACCTTCAGGCGCTCCGCTTCATGCGCAGCATCGATAACCGCTTGCTTGGCTCTCGACTCAGAGAGAAGCTCCGTCAAATGCTGATGAACCTTTTCCGCCGTCCCTACGGCATCAA                                                                                                                                           >  7:316070/1‑136                                    CGCTTCATGCGCAGCATCGATAACCGCTTGCTTGGCTCTCGACTCAGAGAGAAGCTCCGTCAAATGCTGATGAACCTTTTCCGCCGTCCCTACGGCATCAACCTGCTCGCGGCTTTCGTCGATGGCGCCTTGCAAC                                                                                                        >  8:27613/1‑136                                            GCGCAGCATCGATAACCGCTTGCTTGGCTCTCGACTCAGAGAGAAGCTCCGTCAAATGCTGATGAACCTTTTCCGCCGTCCCTACGGCATCAACCTGCTCGCGGCTTTCGTCGATGGCGCCTTGCAACGCAGTCGA                                                                                                >  1:48078/1‑136                                                                            GACTCAGAGAGAAGCTCCGTCAAATGCTGATGAACCTTTTCCGCCGTCCCTACGGCATCAACCTGCTCGCGGCTTTCGTCGATGGCGCCTTGCAACGCAGTCGACTTGCCGACAATCCGGTGATCACGCTGGAGGC                                                                <  1:138407/136‑1                                                                                 AGAGAGAAGCTCCGTCAAATGCTGATGAACCTTTTCCGCCGTCCCTACGGCATCAACCTGCTCGCGGCTTTCGTCGATGGCGCCTTGCAACGCAGTCGACTTGCCGACAATCCGGTGATCACGCTGGAGGCGAGCC                                                           <  7:350794/136‑1                                                                                                                           CCCTACGGCATCAACCTGCTCGCGGCTTTCGTCGATGGCGCCTTGCAACGCAGTCGACTTGCCGACAATCCGGTGATCACGCTGGAGGCGAGCCCGGCAACGCTGACCACATCGAAACTGAAACTGCTCCGCGCTC                 >  3:399188/1‑136                                                                                                                                         CCTGCTCGCGGCTTTCGTCGATGGCGCCTTGCAACGCAGTCGACTTGCCGACAATCCGGTGATCACGCTGGAGGCGAGCCCGGCAACGCTGACCACATCGAAACTGAAACTGCTCCGCGCTCGCGTCAATCGCAT    >  6:178770/1‑135                                                                                                                                         CCTGCTCGCGGCTTTCGTCGATGGCGCCTTGCAACGCAGTCGACATGCCGACAATCCGGTGATCACGCTGGAGCCGAGCCCGGCAACGCTGACCACATCGAAACTGAAACTCCTCCGCGCTCGCGTCAATCGCAT    >  2:173417/1‑135                                                                                                                                          CTGCTCGCGGCTTTCGTCGATGGCGCCTTGCAACGCAGTCGACTTGCCGACAATCCGGTGATCACGCTGGAGGCGAGCCCGGCAACGCTGACCACATCGAAACTTAAACTTATAATCGCTCGCGTCAATCGCATga  <  2:253770/136‑3                                                                                                                                                                                                                                                                                   ACATCAGCCATCGCTGCATCGACCTTCAGGCGCTCCGCTTCATGCGCAGCATCGATAACCGCTTGCTTGGCTCTCGACTCAGAGAGAAGCTCCGTCAAATGCTGATGAACCTTTTCCGCCGTCCCTACGGCATCAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  ACB143/4195441‑4195578 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accTGCTCGCGGCTTTCGTCGATGGCGCCTTGCAACGCAGTCGACTTGCCGACAATCCGGTGATCACGCTGGAGGCGAGCCCGGCAACGCTGACCACATCGAAACTGAAACTGCTCCGCGCTCGCGTCAATCGCATCA  >  ACB143/4300622‑4300756

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.