Predicted mutation
evidence seq id position mutation freq annotation gene description
RA ACB143 1,628,160 G→A 6.2% G118D (GGC→GAC)  era → GTPase Era

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*ACB1431,628,1600GA 6.2% 208.3 / 4.1 65G118D (GGC→GAC) eraGTPase Era
Reads supporting (aligned to +/- strand):  ref base G (40/20);  new base A (2/2);  total (42/23)
Fisher's exact test for biased strand distribution p-value = 6.03e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.28e-01

GGCCCTGAACCGTTACATGAACCGCAATGCCTCGGCGGCCCTCAAGGACGTCGACGTGGTTATCTTCGTGGTTGACCGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTGCAAGAGCAACTGCCGAACGCCGAGGTGATGCCGATTTCCGCACAGCAGGGGCACAA  >  ACB143/1628026‑1628292
                                                                                                                                      |                                                                                                                                    
ggCCCTGAACCGTTACATGAACCGCAATGCCTCGGCGGCCCTCTAGGACGTCGACGTGGTTATCTTCGTGGTTGTCCGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGc                                                                                                                                     <  2:347482/136‑1 (MQ=255)
   ccTGAACCGTTACATGAACCGCAATGCCTCGGCGGCCCTCAAGGACGTCGACGTGGTTATCTTCGTGGTTGACCGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCg                                                                                                                                  >  5:7863/1‑136 (MQ=255)
        aCCGTTACATGAACCGCAATGCCTCGGCGGCCCTCAAGGACGTCGACGTGGTTATCTTCGTGGTTGACCGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGat                                                                                                                             >  5:392945/1‑136 (MQ=255)
          cGTTACATGAACCGCAATGCCTCGGCGGCCCTCAAGGACGTCGACGTGGTTATCTTCGTGGTTGACCGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGatca                                                                                                                           >  6:128954/1‑136 (MQ=255)
           gTTACATGAACCGCAATGCCTCGGCGGCCCTCTAGGACGTCGACGTGTTTTCTTCGTGGTTGACCGTACCAAGTTGACCGACGAGGACCAACTGGTTCTGGAGCTCGTGCAGTATGTCACCGGCCCGCTGatcatc                                                                                                                         <  7:22713/136‑1 (MQ=255)
            ttACATGAACCGCAATGCCTCGGCGGCCCTCAAGGACGTCGACGTGGTTATCTTCGTGGTTGACCGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGatcatc                                                                                                                         <  8:198440/136‑1 (MQ=255)
            gaaCATGAACCGCCATGCCTCGGCGGCCCTCAAGGACGTCGACGTGGTTATCTTCGGGGTTGACCGTACCAAGAGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGatcatc                                                                                                                         <  8:136865/134‑1 (MQ=255)
               cATGAACCGCAATGCCTCGGCGGCCCTCAAGGACGTCGACGTGGTTATCTTCGTGGTTGACCGTACCAAGTGGACCGCCGAGGACCCACTGCTTCTGGAGCGCGTGCCGTATGTCACCGGCCCGCTGATCATcgcg                                                                                                                      >  4:79827/1‑136 (MQ=255)
               cATGAACCGCAATGCCTCGGCGGCCCTCAAGGACGTCGACGTGGTTATCTTCGTGGTTGACCGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATcgcg                                                                                                                      >  1:129306/1‑136 (MQ=255)
               cATGAACCGCAATGCCTCGGCGGCCCTCAAGGACGTCGACGTGGTTATCTTCGTGGTTGACCGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATcgcg                                                                                                                      >  5:298211/1‑136 (MQ=255)
               cATGAACCGCAATGCCTCGGCGGCCCTCAAGGACGTCGACGTGGTTATCTTCGTGGTTGACCGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATcgcg                                                                                                                      >  3:330377/1‑136 (MQ=255)
               cATGAACCGCAATGCCTCGGCGGCCCTCAAGGACGTCGACGTGGTTATCTTCGTGGTTGACCGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATcgcg                                                                                                                      >  2:276196/1‑136 (MQ=255)
               cATGAACCGCAATGCCTCGGCGGCCCTCAAGGACGTCGACGTGGTTATCTTCGTGGTTGACCGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATcgcg                                                                                                                      >  7:358561/1‑136 (MQ=255)
               cATGAACCGCAATGCCTCGGCGGCCCTCAAGGACGTCGACGTGGTTATCTTCGTGGTTGACCGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATcgcg                                                                                                                      >  1:331090/1‑136 (MQ=255)
                       gCAATGCCTCGGCGGCCCTCAAGGACGTCGACGTGGTTATCTTCGTGGTTGACCGTACCAAGTGGACCGCCGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGACCCGCTGATCATCGCGGTcaaca                                                                                                               >  3:279121/1‑135 (MQ=255)
                       gCAATGCCTCGGCGGCCCTCAAGGACGTCGACGTGGTTATCTTCGTGGTTGACCGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGACCCGCTGATCATCGCGGTcaaca                                                                                                               >  3:273662/1‑135 (MQ=255)
                       gCAATGCCTCGGCGGCCCTCAAGGACGTCGACGTGGTTATCTTAGTGGTTGACCGTACCAAGTGGACCGACGAGGAAAAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTcaaca                                                                                                               >  3:253333/1‑135 (MQ=255)
                        cAATGCCTCGGCGGCCCTCAAGGACGTCGACGTGGTTATCTTCGTGGTTGACCGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAg                                                                                                             <  3:274083/136‑1 (MQ=255)
                          aTGCCTCGGCGGCCCTCAAGGACGTCGACGTGGTTATCTTCGTGGTTGACCGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAgac                                                                                                           <  3:202367/136‑1 (MQ=255)
                           tGCCTCGGCGGCCCTCAAGGACGTCGACGTGGTTATCTTCGTGGTTGACCGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAgacc                                                                                                          >  3:186240/1‑136 (MQ=255)
                           tGCCTCGGCGGCCCTCAAGGACGTCGACGTGGTTATCTTCGTGGTTGACCGTAACAAGAGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATAGCTGTCAACACgacc                                                                                                          >  4:85994/1‑136 (MQ=255)
                                   cggcCCTCAAGGACGTCGACGTGGTTATCTTCGTGGTTGACCGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCAt                                                                                                  >  7:330682/1‑136 (MQ=255)
                                      cccTCAAGGACGTCGACGTGGTTATCTTCGTGGTTGACCGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGa                                                                                               <  1:341924/136‑1 (MQ=255)
                                           aaGGACGTCGACGTGGTTATCTTAGTGGTTGAACGTACCAAGTGGCCCGACGAGGACCCACTGGTTGTGGATCGCGTGAAGTATGTCACCGGCCCGCTGATCATAGCGGTCAAAAATAACGAACGCATTGAagcg                                                                                           >  3:36980/1‑133 (MQ=255)
                                           aaGGACGTCGACGTGGTTATATTCCTGGTTGACCGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCCTGCAGTATTTCACCGGCCCGCTGATCATAACGGTCAACAACACCGACCCCAAGGAagac                                                                                           >  2:150966/1‑134 (MQ=255)
                                                   cGACGTGGTTATCTTCGTGGTTGACAGTACCAAGTGGACCGACGAGGCCCAACTGGGTCTCGAGCGCGTGCAGAATGTCACCCGCACCCTGATCATCACGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAg                                                                                  >  2:295748/1‑136 (MQ=255)
                                                    gACGTGGTTATCTTCGTGGTTGACCGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGc                                                                                 >  7:380782/1‑136 (MQ=255)
                                                     aCGTGGTTATCTTCGTGGTTGACCGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGCCCGACCGCATGGAAGAGAAAGCCGAGCt                                                                                >  2:243584/1‑136 (MQ=255)
                                                     aCGTGGTTATCTTCGTGGTTGACCGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCt                                                                                >  3:16467/1‑136 (MQ=255)
                                                       gTGGTTATCTTCGTGGTTGACCGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGa                                                                              <  4:330377/136‑1 (MQ=255)
                                                                   gTGGTTGACCGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTg                                                                   >  2:336387/1‑135 (MQ=255)
                                                                          aCCGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGc                                                            <  2:235911/135‑1 (MQ=255)
                                                                            cGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTg                                                          >  3:155155/1‑135 (MQ=255)
                                                                                 cAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTGCAagag                                                    <  3:316908/136‑1 (MQ=255)
                                                                                        aCCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTGCAAGAGCAACTGc                                             >  6:384901/1‑136 (MQ=255)
                                                                                        aCCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTGCAAGAGCAACTGc                                             >  8:54709/1‑136 (MQ=255)
                                                                                          cgacgaGGACAAAATGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAAAAAGACCGACCGCATGGAAGAGAAAGACGAGCTGATCCCGCACCTGCAGTGGCTGCAAGAGAAACTGcc                                            >  3:74198/1‑135 (MQ=255)
                                                                                            acgaGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGCGCTGATCCCGCACCTGCAGTGGCTGCAAGAGCAACTGCCGaa                                         >  5:177918/1‑136 (MQ=255)
                                                                                                 gACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAGCAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTGCAAGAGCAACTGCCGAACGCCg                                    >  7:360279/1‑136 (MQ=255)
                                                                                                         ggTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTGCCAGAGCAACTGCCGAACGCCGACGGGATg                            >  1:146921/1‑136 (MQ=255)
                                                                                                         ggTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTGCAAGAGCAACTGCCGAACGCCGAGGTGATg                            >  5:8299/1‑136 (MQ=255)
                                                                                                              tGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTGCAAGAGCAACTGCCGAACGCCGAGGTGATGCCGAt                       >  4:24782/1‑136 (MQ=255)
                                                                                                                gAGCGCGTGCAGTTTGTCACCGGCCCGCTGATCAACGCGGTAAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTGCAAGAGCAACTGCCGAACGCCGAGGTGATGCCGAttt                     <  8:330682/136‑1 (MQ=255)
                                                                                                                   cgcgTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTGCAAGAGCAACTGCCGAACGCCGAGGTGATGCCGATTTCCg                  <  7:273152/136‑1 (MQ=255)
                                                                                                                   cgcgTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTGCAAGAGCAACTGCCGAACGCCGAGGTGATGCCGATTTCCg                  >  6:278743/1‑136 (MQ=255)
                                                                                                                   cgcgTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTGCAAGAGCAACTGCCGAACGCCGAGGTGATGCCGATTTCCg                  <  7:267852/136‑1 (MQ=255)
                                                                                                                      gTGCATTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCGCGCACCTGCAGTGGCTGCAAGAGCAACTGCCGAACGCCGAGGTGATGCCGATTTCCGcac               <  3:144809/136‑1 (MQ=255)
                                                                                                                       tGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAgaccgacc                                                                                                      >  1:379429/1‑48 (MQ=255)
                                                                                                                       tGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAgaccgacc                                                                                                      <  2:379429/48‑1 (MQ=255)
                                                                                                                       tGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTGCAAGAGCAACTGCCGAACGCCGAGGTGATGCCGATTTCCGcaca              <  2:15601/136‑1 (MQ=255)
                                                                                                                        gCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAgac                                                                                                           >  1:198887/1‑42 (MQ=255)
                                                                                                                        gCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAgac                                                                                                           <  2:198887/42‑1 (MQ=255)
                                                                                                                        gCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTGCAAGAGCAACTGCCGATCGCCGAGGTGATGCCGATTTCCGCAcag             >  7:10198/1‑136 (MQ=255)
                                                                                                                        gCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTGCAAGAGCAACTGCCGAACGCCGAGGTGATGCCGATTTCCGCAcag             >  4:314516/1‑136 (MQ=255)
                                                                                                                        gCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTGCAAGAGCAACTGCCGAACGCCGAGGTGATGCCGATTTCCGCAcag             >  6:52172/1‑136 (MQ=255)
                                                                                                                        gCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTGCAAGAGCAACTGCCGAACGCCGAGGTGATGCCGATTTCCGCAcag             >  5:3747/1‑136 (MQ=255)
                                                                                                                        gCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTGCAAGAGCAACTGCCGAACGCCGAGGTGATGCCGATTTCCGCAcag             >  4:379739/1‑136 (MQ=255)
                                                                                                                           gTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTGCAAGAGCAACTGCCGAACGCCGAGGTGATGCCGATTTCCGCAcagcag          >  1:331400/1‑136 (MQ=255)
                                                                                                                             aTGTCACCGGCCCGCTTATCATCGAGTTCAACAATACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTGCAAGAGCAACTGCCGAACGCCGATGTGATGCCGATTTCCGCACAGCAggg        <  1:185604/136‑1 (MQ=255)
                                                                                                                              tatCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTGCAAGAGCAACTGCCGAACGCCGAGGTGATGCCGATTTCCGCACAGCAggg        <  5:366915/133‑1 (MQ=255)
                                                                                                                              tGTCACCGTCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTGCAAGAGCAACTGCCGAACGCCGAGGTGATGCCGATTTCCGCACAGCAggg        <  4:16467/135‑1 (MQ=255)
                                                                                                                              tGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTGCAAGAGCAACTGCCGAACGCCGAGGTGATGCCGATTTCCGCACAGCAggg        <  3:57000/135‑1 (MQ=255)
                                                                                                                              tGTCACCGACCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTGCAAGAGCAACTGCCGAACGCCGAGGTGATGCCGATTTCCGCACAGCAggg        <  4:273662/135‑1 (MQ=255)
                                                                                                                              tGTCACCGACCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTGCAAGAGCAACTGCCGAACGCCGAGGTGATGCCGATTTCCGCACAGCAggg        <  4:279121/135‑1 (MQ=255)
                                                                                                                                   ccGGCCCGCTGATCATCGCGGTCAACAAGCCCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCCCCTGCAGTGGCTGCAAGAGCAACTGCCGAACGCCGAGGTGATGCCGATTTCCGCACAGCAGGGGcacac  >  4:245661/1‑135 (MQ=255)
                                                                                                                                      |                                                                                                                                    
GGCCCTGAACCGTTACATGAACCGCAATGCCTCGGCGGCCCTCAAGGACGTCGACGTGGTTATCTTCGTGGTTGACCGTACCAAGTGGACCGACGAGGACCAACTGGTTCTGGAGCGCGTGCAGTATGTCACCGGCCCGCTGATCATCGCGGTCAACAAGACCGACCGCATGGAAGAGAAAGCCGAGCTGATCCCGCACCTGCAGTGGCTGCAAGAGCAACTGCCGAACGCCGAGGTGATGCCGATTTCCGCACAGCAGGGGCACAA  >  ACB143/1628026‑1628292

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: