| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | ACB143 | 1094534 = | 78 (0.990) | 3 (0.040) | 3/240 | 8.2 | 3.9% | coding (63/486 nt) | mlaD | Intermembrane phospholipid transport systembinding protein MlaD |
| ? | ACB143 | = 1094530 | 75 (1.030) | coding (59/486 nt) | mlaD | Intermembrane phospholipid transport systembinding protein MlaD | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGGTAACCTTGCCGATGGTCACACCGGCCATGGTCACTTTAGCTCTGACCGTCAAACCGGCGATATTGTCGAAGTAAGCATAAACTTTATAGGTATCGCTGCTCGGGCTGGCCGACAGCCCGCTGACACGCAGGGCCAGCAGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < ACB143/1094679‑1094534‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcagcagcGCCAGGATCCCGGCCAGGAGGAACAGGCCGACACCGATTTCCAGGGTGCGGTTTTGCATCAGAAATCTCCAAACATCAAGGCGGTCAGAATAAAGTCCAGACCCAGCACTGCCAACGAGGCATAGACC < ACB143/1094530‑1094403 CGGTAACCTTGCCGATGGTCACACCGGCCATGGTCACTTTAGCTCTGACCGTCAAACCGGCGATATTGTCGAAGTAAGCATAAACTTTATAGGTATCGCTGCTCGGGCTGGCCGACAGCCCGCTGACACGCAGGGCC > 4:45031/1‑137CGGTAACCTTGCCGATGGTCACACCGGCCATGGTCACTTTAGCTCTGACCGTCAAACCGGCGATATTGTCGAAGTAAGCATAAACTTTATAGGTATCGCTGCTCGGGCTGGCCGACAGCCCGCTGACACGCAGGGCC > 7:181722/1‑137 CCTTTCCTATGGTCACACCGGCCATTGTCACTTTAGCTCTGACCGTCAAACCGGAGTTATTGTCGTAGTAAGCCTAAACTTTATAGGTATCGCTGCTCGGGCTGGCCGACAGCCAGCTGACACGCATGGCCAGCAGC < 2:401711/137‑1 CCTTGCCGATGGTCACACCGGCCATGGTCACTTTAGCTCTGACCGTCAAACCGGCGATATTGTCGAAGTAAGCATAAACTTTATAGGTATCGCTGCTCGGGCTGGCCGACAGCCCGCTGACACGCAGGGCCAGCAGC < 3:45031/137‑1 ACACCGGCCATGGTCACTTTAGCTCTGACCGTCAAACCGGCGATATTGTCGAAGTAAGCATAAACTTTATAGGTATCGCTGCTCGGGCTGGCCGACAGCCCGCTGACACGCAGGGCCAGCAGCAGCGCCAGGATCCC > 5:499845/1‑137 GCTGCTCGGGCTGGCCGACAGCCCGCTGACACGCAGGGCCAGCAGCAGCGCCAGGATCCCGGCCAGGAGGAACAGGCCGACACCGATTTCCAGGGTGCGGTTTTGCATCAGAAATCTCCAAACATCAAGGCGGTCAG > 8:413946/1‑137 CGACAGCCCGCTGACACGCAGGGCCAGCAGCAGCGCCAGGATCCCGGCCAGGAGGAACAGGCCGACACCGATTTCCAGGGTGCGGTTTTGCATCAGAAATCTCCAAACATCAAGGCGGTCAGAATAAAGTCCAGACC < 6:499845/137‑1 tGCAGCAGCGCCAGGATCCCGGCCAGGAGGAACAGGCCGACACCGATTTCCAGGGTGCGGTTTTGCATCAGTAATCTCCAAACATCAAGGCGGTCAGAATAAAGTCCAGACCCAGCACTGCCAACGAGGCATAGACC < 7:23453/136‑1 AGCAGCAGCGCCAGGATCCCGGCCAGGAGGAACAGGCCGACACCGATTTCCAGGGTGCGGTTTTGCATCAGAAATCTCCAAACATCAAGGCGGTCAGAATAAAGTCCAGACCCAGCACTGCCAACGAGGCATAGACC > 5:459418/1‑137 AGCGCCAGGATCCCGGCCAGGAGGAACAGGCCGACACC < 1:418918/38‑1 AGCGCCAGGATCCCGGCCAGGAGGAACAGGCCGACACC > 2:418918/1‑38 CGGTAACCTTGCCGATGGTCACACCGGCCATGGTCACTTTAGCTCTGACCGTCAAACCGGCGATATTGTCGAAGTAAGCATAAACTTTATAGGTATCGCTGCTCGGGCTGGCCGACAGCCCGCTGACACGCAGGGCCAGCAGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < ACB143/1094679‑1094534‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcagcagcGCCAGGATCCCGGCCAGGAGGAACAGGCCGACACCGATTTCCAGGGTGCGGTTTTGCATCAGAAATCTCCAAACATCAAGGCGGTCAGAATAAAGTCCAGACCCAGCACTGCCAACGAGGCATAGACC < ACB143/1094530‑1094403 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |