Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | ACB143 | 2,171,271 | 0 | G | C | 32.7% | 202.9 / 41.4 | 129 | V150V (GTG→GTC) | CJ019_02060 | IS1182 family transposase ISPpu16 |
Reads supporting (aligned to +/- strand): ref base G (62/12); new base C (0/36); total (63/66) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.40e-19 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 130 total aligned reads displayed.
AAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACC‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCGGGCAATGCCGGAGGTGGCCATGGCGAAGG > ACB143/2171135‑2171404 | aaaCCATCGACGACATTCGCAAGGACAACGCTAAAGCCATTCGTAGCGTCTGCCGTCAGTTAGTGATCCTCTGCCGTAACA‑TCAAACTTTTCTCTGAGTCGATAATTGCCATCTACGGCAGCAAGTTCAAA‑GCA‑GT‑g > 6:440631/1‑137 (MQ=255) aaCCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACC‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑Ga > 5:92899/1‑137 (MQ=255) ccGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACC‑TCAACCTTTACTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATcgc > 1:53727/1‑137 (MQ=255) tCGCAAGGACAACTGTAAAGCCTTTCTAAGCGTCTGCGGTCAGTTCGTGATCCTCTGCCGTAACC‑TCAACTTTTTGTCTGAGGCTATAATTGCCATCTAGGGCAGCAAGTTAAAA‑GCA‑GT‑GAACAACCGCGACCGTa < 8:264945/137‑1 (MQ=255) tCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACC‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTa > 6:144478/1‑137 (MQ=255) cggACAACTGAAAAGCCTTTCGTCGCGGCGGCCGTCAGTTCGTTATCCTCTGCCGTAACC‑ACAACCTTTTGTCTGAGTCTATCATTCCCATCGCCGGCAGAAAGTACAAA‑GCA‑GT‑CAACAATCGCGACCGTAACTTc < 4:353798/136‑1 (MQ=255) aaCGTTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACC‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCa < 8:389513/137‑1 (MQ=255) aaCGGTAACGCCATTCGTAGCGTCTGCCGTCAGTTCGTGAACCTCTGCCGAAACC‑TCAACCTTTTCTCTGAGTCGATCATTGCCAGCGACGGCAGAAAGTACAAA‑GCA‑GT‑CAACAATCGCGACCGTAACTTCACCCa < 2:351886/137‑1 (MQ=255) ggtaaaaGCAATTCGTAGCGTCTGCGTTCATTTGGTTAGCATCTGCCTAAACC‑TCAACCTTTTCTCTGAGCCGATCATTGCCATCGAGGGCAGCAATTTAAAA‑GCT‑GT‑AAAAAACCGCGACCGTAACTTCACCCAgg < 6:278868/133‑1 (MQ=255) cGGTAAACCAATCCGTCCCGGCGGCCGTCTGGTCGTGATCCTCTCCCGACACC‑ACAACCTTTTCGCTGCGCCGATAATTCCCTCCCACGTCAGAAAGTACAAC‑CCC‑GT‑AAAAAACCGCGACCGTAACTTCACCCAgg < 4:264199/137‑1 (MQ=255) cGGAAAAGCAATTCGTAGCGGCTGCCGTCTGTTCGTTATCCTCTGCCGTAACC‑TAAACCTTTTCTCTGAGTCTATCATTGCCATCGACGGAAGAAAGTTCAAA‑GCA‑GT‑CAACAAGCGCGACCGTAACTTCACCCAgg < 6:170717/137‑1 (MQ=255) aaGCCATTCTTCGCGTCTGCCTTCAGTTGGTGACCCTCTGCCGAAACC‑AAAAATTTTTCTCTTTGTCTATAATTCCCATCGCCGGCACAAATTTCAAC‑GCA‑TT‑AAACAACCGCGACCGTAACTTCACCCAGGCCAAg < 2:118316/137‑1 (MQ=255) ccATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACC‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTg > 3:442352/1‑137 (MQ=255) cATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACC‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGa > 5:81237/1‑137 (MQ=255) cATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACC‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGa > 3:253107/1‑137 (MQ=255) cATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACC‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACACAGGCCAAGGTGa > 1:395068/1‑137 (MQ=255) cATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACC‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTAACCCAGGCCAAGGTgt > 3:232/1‑136 (MQ=255) ttCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACC‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAg > 2:87371/1‑137 (MQ=255) ttCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACC‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAg > 3:435841/1‑137 (MQ=255) cGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACC‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGc > 8:192469/1‑137 (MQ=255) gtggCGGCTGCAGTCATTTGGTTTTCCTCT‑CCGTAACCATCAACCTTTGGTGTGCGTGGTTTTTTGAGAGCGAGGGCACCATGTTCAAA‑GAT‑GT‑GAACAAGCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGcc < 4:74807/134‑1 (MQ=255) gTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACC‑TCCACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGAGCCCGTAACTTCACCCAGGCCAAGGTGCAGGcc > 8:242472/1‑137 (MQ=255) gTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACC‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGcc > 8:53165/1‑137 (MQ=255) gTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACC‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGcc > 5:33333/1‑137 (MQ=255) gTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACC‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGcc > 1:118316/1‑137 (MQ=255) gTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACC‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGcc > 5:418520/1‑137 (MQ=255) cccggcTGCCGTCAGTGCGTGATCCTCTGCCGAAACC‑TCACCCTTTTCTCGGAGTCCATCATTCCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑CAAAAAGCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCg < 6:84976/132‑1 (MQ=255) aGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACC‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGcccc > 8:350463/1‑136 (MQ=255) aGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACC‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTACAAC‑GCA‑GT‑CAACAAGCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCg < 1:312100/137‑1 (MQ=255) aGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACC‑TCAACATTTTCTCTGACTCGATCAATGCCATGCACGGCAGCAAGTGAAAA‑GCA‑GT‑GAACAATAGCGACCCTAACTACACACAGGCCAAGGTGAAGGccag > 1:367418/1‑135 (MQ=255) ggcggCCGTCTTTTCGTTATCCTGCCCCTTAACC‑TAAACATTTTCTGTGAGTCCATCATTGCCATCCCCGGCAGCAATTACAAA‑GCC‑GT‑CAACAACCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCAt < 4:100488/133‑1 (MQ=255) ggcTGCCGTCAGTTCGTGATCCTCTGCCTAAACC‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGCCGGCAGAAAGTTCAAA‑GCA‑GT‑CAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCAt < 8:49626/135‑1 (MQ=255) gTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACC‑TCAACCTTTTCTCTGCGACGATCATTCCCAGCGACGGCAGCAAGTTCAAA‑GCA‑GT‑CAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCAt < 7:367184/137‑1 (MQ=255) cTGCCGTCAGTTCGTGATCCTCTGCCGTAACC‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATgc > 3:387884/1‑137 (MQ=255) ttctgTTCGTGACCCTCGGCCGTAACC‑TAAACTTTTTGTCTGAGTCGATCATGGCCATCGACGGCAGAAAGTACAAA‑GCA‑GT‑CAACAACCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCaa < 6:33333/133‑1 (MQ=255) gTTCGTGATCCTCTGCCGTAACC‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCC‑GGGCAAGGTTAAGGCCCGCATGCAGCCAATccg > 3:457777/1‑135 (MQ=255) ttggttaTCCTCTGCCGTAACT‑TCAACTTTTTGTCTGAGGCGATAATTGCCATCGACGGCACCAAGTTCAAA‑GCT‑GT‑CAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCga < 7:350463/131‑1 (MQ=255) ttCGTGATCCTCTGCCGAAACC‑TCAACCTTTTCTCTGAGTCGATATTTGCCATCTACGGCAGCAATTTCAAC‑GCA‑GT‑GAACAAGCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCga < 8:311138/137‑1 (MQ=255) ttCGTCATCCTCGGCCTAAACC‑TCAACCTTTTCTCTGAGTCTAGCATTGCCATCGACGGCAGCAAGTACAAC‑GCA‑GT‑TAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCga < 6:207765/137‑1 (MQ=255) gtCGTGATCCTCTGCCTTAACC‑TCAAACTTTTCTCTGAGTCTATCATTCCCATCCAGGGCACCAAGTTCAAA‑GCA‑GT‑CAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCga < 8:159305/136‑1 (MQ=255) tctGCCGTAACC‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAATTTCAAA‑GCA‑GT‑TAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCCTGCAGCAAATCGAGCAGAGCAtt > 1:216973/1‑137 (MQ=255) tcccttAACC‑TCACCCTTTTCTCTGCGTCCATCATTGCCAGCGCCGGAAG‑AATTTACAA‑CCA‑CTCCAAAAACCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 5:27527/132‑1 (MQ=255) tcccGTAACC‑ACAACCTTTTCTCTGAGTCGATAATTGCCATCGACGGCAGAAAGTACAAC‑GCA‑GT‑CAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 4:100715/135‑1 (MQ=255) tcccGAAACC‑TAAACCTTTTCTCTGAGTCCATCATTGCCAGCGCCGGCAGAAATTTAAAA‑GCA‑GT‑CAACAAGCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 5:144478/135‑1 (MQ=255) tGCCGAAACC‑ACAACTTTTTCTCTGAGTCGAAAATTGCCATCGACGGCACAAAGTACAAA‑GCA‑TT‑CAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 7:440362/137‑1 (MQ=255) ggcctaaaCC‑TAAACATTTTCTGTGAGGCTATAATTCCCATCGACGGAAGAAATTTAAAA‑CCA‑GT‑CAACAAGCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 7:149877/131‑1 (MQ=255) ggCCGTAACC‑ACAACCTTTTCTCTGTGTCTATCATTCCCAGCGCCGGCAGCAAGTCCAAA‑GCA‑GT‑TAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 8:61042/136‑1 (MQ=255) ggCCGAACCC‑TCAACATTTTCTCTGAGTCCATAATTGCAATCGACGGCACCAATTTAAAA‑GCA‑GT‑AAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 5:90564/136‑1 (MQ=255) gccggaaaCC‑TAAACGTTTTGTGTTCGCCGATCATTCCCATGGACGGCAGCAAGTACAAC‑CCC‑GT‑TAACAAGCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 4:253107/131‑1 (MQ=255) gcccctAACC‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAC‑GCA‑TA‑CAACAACCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 5:361727/132‑1 (MQ=255) gcccGTAACC‑ACAACCTTTTCTCTGAGTCGATCATGGCCATCTCCGGAAGCAAGTTCAAA‑GCC‑GT‑GAAAACTCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 8:291230/135‑1 (MQ=255) ccccctAACC‑TAAACATTTGCTCTCTGTCTATCATTCCCACCCACGGCA‑CAAAGTAAAA‑CCACGT‑CACCAACCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 1:189360/132‑1 (MQ=255) cccGTAACC‑CCAACCTTTTCTCTGAGTCTAGCATTCCCAGCGCCGGCACCAAGTGCAAA‑CCA‑GT‑CAACAACCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAg < 3:414804/136‑1 (MQ=255) cGTAACC‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAgcc > 7:159305/1‑136 (MQ=255) cc‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCAtt > 5:198768/1‑127 (MQ=255) cc‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCAtt < 6:198768/127‑1 (MQ=255) cc‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTAcc > 5:423054/1‑137 (MQ=255) ccacAACCTTTTCTCTGAGTCGATAATTCCCAGCGACGGAAGCAAGTACAAA‑GCA‑TT‑CAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTAcc < 8:118899/134‑1 (MQ=255) cTTTTCTCTGTTTCTATCTTTCACCCCGACGGCAGCAATTAAAAA‑GCA‑TT‑TAAAAACCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGc < 3:415611/137‑1 (MQ=255) cTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGc > 6:137598/1‑137 (MQ=255) cTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGc > 7:247679/1‑137 (MQ=255) cTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGc > 4:11402/1‑137 (MQ=255) cTTTTCTCTGAGTCGATATTTGCCATCGACGGCAGAAAGTTCAAA‑GCA‑GT‑TAACAAACGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGc < 6:418520/137‑1 (MQ=255) ttCTCTGTGTCGATCATTGCCATCTAGGGCAGCATGTTCAAA‑GCT‑GT‑TAAAAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGAt < 5:103643/137‑1 (MQ=255) ctctGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATgg > 8:126262/1‑137 (MQ=255) tctGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGa > 7:332318/1‑137 (MQ=255) tctGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGa > 5:351973/1‑137 (MQ=255) tatGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATAGCGACAGTAACTTCACCCAGGCCAACCAGAATGCCCGAAAGAAGCAAATCTAGAACAGCATTCAGAGCTACATTACAGCGATGGa > 4:220842/3‑137 (MQ=255) gtGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑CAACAAACGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGAt < 5:222224/136‑1 (MQ=255) tctaTCATTCCCATCGCCGGCAGCAATTTCAAC‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGc < 4:442352/134‑1 (MQ=255) tCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGc > 4:195732/1‑137 (MQ=255) tCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGc > 3:314203/1‑137 (MQ=255) tCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑CAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGc < 6:338923/137‑1 (MQ=255) gcGATCATTGCAATCGACGGCACCAAGTAAAAA‑CCA‑GT‑CAACAACCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGc < 2:254820/136‑1 (MQ=255) ccGATCATTGCCATCGCGGGCACAAAGTTCAAA‑GCA‑GT‑GAACAACCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGc < 4:446328/136‑1 (MQ=255) cGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCa > 6:185069/1‑137 (MQ=255) cGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCa > 2:77808/1‑137 (MQ=255) cGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCa > 7:56924/1‑137 (MQ=255) atgcccATCGCCGGCACCAAGTCCAAA‑GCC‑GT‑CAACAAGCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCg < 4:302087/133‑1 (MQ=255) aTTGCCATCGACGGCAGCAAGTTCAAC‑GCA‑GT‑GAACAAACGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGAAAATCGAGCAGAGCATTGAGCCCTACCTTACAGAGATGGATTCGGCAGACCg > 6:33894/1‑137 (MQ=255) aTTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCg > 6:387836/1‑137 (MQ=255) aTTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑CT‑GAACAAACGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCg > 8:185824/1‑137 (MQ=255) aTTCCCATCGCCGGCAGCAAGTTAAAC‑GCA‑GT‑CAACAACCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCg < 3:276037/137‑1 (MQ=255) cATCGAAGGCAGCAAGTTCAAA‑GCA‑GT‑GAAAAATCGCGAACGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGATCATTGAGCGCTACCTTAGAGCGATGGCTTCGGCAGACCGGGCaa > 1:411306/1‑137 (MQ=255) cATCCACGGCACCAA‑TTCAAACCCA‑GT‑CAACAAGCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCGGGCaa < 5:257082/137‑1 (MQ=255) cATAGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAACGTGAAGGCCCGCAAGCACCAAATCGAGCAGAGCATTGAGAGCTACCTTACATCGATGGATTCGGCAGACCGGGCaa > 8:182501/1‑137 (MQ=255) gggCAGCAATTTCAAA‑GCA‑GT‑CAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCGGGCAATGCCgg < 2:91249/136‑1 (MQ=255) cGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGAAAGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGAGATTGATTCGGCAGACCGTGCAATGCCgg > 8:216549/1‑137 (MQ=255) agcaAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCg > 7:432572/1‑76 (MQ=255) agcaAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCg < 8:432572/76‑1 (MQ=255) agcaAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCGCGCAATGCCGGAGGt > 8:155548/1‑137 (MQ=255) gcaAGTTCAAT‑GCT‑GT‑CACCACTCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCGGGCAATGCCGGAGGTg < 8:395697/137‑1 (MQ=255) ccaAGTTCAAC‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCGGGCAATGCCGGAGGTg < 8:402854/136‑1 (MQ=255) caaaGCTCAAA‑GCA‑GA‑CAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCGGGCAATGCCGGAGGTg < 1:121628/135‑1 (MQ=255) cacgTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCCGGCCAAGGTGACGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGATACATTACAGCGATGCATTCGGCATACCGGGTACTGGCGGAGGTgg > 2:461606/4‑137 (MQ=255) caAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATAGAGCGCTACCTGACAGCGATGGATTCGGCAGACCGGGCAATGCCGGAGGTgg > 2:254323/1‑137 (MQ=255) acaacccA‑GT‑AAACAACCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCGGGCAATGCCGGAGGTGGCCATg < 1:87371/131‑1 (MQ=255) aaa‑CCA‑GT‑CAACAAGCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCGGGCAATGCCGGAGGTGGCCATGGc < 4:314203/137‑1 (MQ=255) a‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCTCTACATTACAGCGATGGATTCGGCAGACCGCGCAATGCCGGAGGTGGCCATGGCGAAgg > 2:326156/1‑137 (MQ=255) a‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCGGGCAATGCCGGAGGTGGCCATGGCGAAgg > 2:118221/1‑137 (MQ=255) | AAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACC‑TCAACCTTTTCTCTGAGTCGATCATTGCCATCGACGGCAGCAAGTTCAAA‑GCA‑GT‑GAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGCGCTACCTTACAGCGATGGATTCGGCAGACCGGGCAATGCCGGAGGTGGCCATGGCGAAGG > ACB143/2171135‑2171404 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |