| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | ACB143 | 3359593 = | 38 (0.800) | 15 (0.320) | 10/242 | NT | 28.8% | intergenic (+219/‑151) | pikAII_1/CJ019_03160 | Narbonolide/10‑deoxymethynolide synthase PikA2,modules 3 and 4/Tn3 family transposase ISPa42 |
| ? | ACB143 | 4755885 = | 36 (0.760) | coding (684/1659 nt) | yojI | ABC transporter ATP‑binding/permease proteinYojI | |||||
GGCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < ACB143/3359723‑3359593‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TATTTGCGCCACCCAGGTACGCTCGATCAACACCTTCGTAATCGCCAAGACCCTGGGCTCGATGCTGTTCTTCGTGGTCATCGCCGTGGCCCTGGCCATGCAGTCGCTGTGGCCCACAGGCGACAAGAGCGTCA > ACB143/4755885‑4756018 GGCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTATTT < 3:236007/136‑1GGCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTATTT > 4:14650/1‑136 AAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTATTTGCGC < 7:149125/136‑1 AAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTATTTGCGC < 4:274308/136‑1 ATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTATTTGCGCCACCCAGGTAC < 5:130158/136‑1 ATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTATTTGCGCCACCCAGGTAC < 3:277425/136‑1 GCTATCCAGACGGTGGATGACCATCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACACCTATTTTCGCCACACAGGTACGCTCGAT < 3:90426/136‑1 ctAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTATTT < 3:158255/107‑1 ctAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTATTT > 4:158255/3‑109 CCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTATTTGCGCCCCCCAGGTACGCTCGATCAACA > 7:68683/1‑136 ACCAGCAAGCCACGGCCTCTCGAATACCCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCGTATCTCGGCATAACGCATATTTGCGCCACCCAGTTACGCTAGATCAACACCTTCGTAATCGC < 2:210866/135‑1 ACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTATTTGCGCCACCCAGGTACGCTCGATCAACACCTTCGTAATCGC < 6:303466/135‑1 CAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTATTTGCGCCACCCAGGTACGCTCGATCAACACCTTCGTAATCGCCAAGAC < 7:147803/136‑1 CAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCTATTTGCGCCACCCAGGTACGCTCGATCAACACCTTCGTAATCGCCAAGAC < 7:207539/136‑1 acTTACAGAACGACTGTCCTAATTTTAGCCTTATCTCGGCATAACCCCTATTTGCGCCACCCAGGTACGCTCGATCAACACCTTCGTAATCGCCAAGACCCTGGGCTCGATGCTGTTCTTCGTGGTCATCGCCGTG < 2:218261/134‑1 TTTTTGCCTTATCTCGGCATAACCCCTATTTGCGCCACCCAGGTACGCTCGATCAACACCTTCGTAATCGCCAAGACCCTGGGCTCGATGCTGTTCTTCGTGGTCATCGCCGTGGCCCTGGCCATGCAGTCGCTGT < 1:125283/136‑1 aGCCTTATCTCGGCATAACCCCTATTTGCGCCACCCAGCCACGCGCGATCAACACCTTCGTAATCGCCAAGACCCTGGGCTCGATGCTGTTCTTCGTGGTCATCGCCGTGGCCCTGGCCATGCAGTCGCTGTGGC < 8:35101/134‑1 TGCCTTCTCTCGGAATAACCCATATTTGCGCCACCCCGGTACGCGAGATCAACACCTTCGTAATCGCCAAGACCCTGGGCTCGATGCTGTTCTTCGTGGTCATCGCCGTGGCCCTGGCCATGCAGTCGCTGTGGC < 6:193069/135‑1 CTTATCTCGGCATAACCCCTATTTGCGCCACCCAGGTACGCTCGATCAACACCTTCGTAATCGCCAAGACCCTGGGCTCGATGCTGTTCTTCGTGGTCATCGCCGTGGCCCTGGCCAGGCAGTCGCTGTGGCCCAC > 3:24833/1‑136 CCTATTTGCGCCACCCAGGTACGCTCGATCAACACCTTCGTAATCGCCAAGACCCTGGGCTCGATGCTGTTCTTCGTGGTCATCGCCGTGGCCCTGGCCATGCAGTCGCTGTGGCCCACAGGCGACAAGAGCGTCA > 3:50365/1‑136 GGCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < ACB143/3359723‑3359593‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TATTTGCGCCACCCAGGTACGCTCGATCAACACCTTCGTAATCGCCAAGACCCTGGGCTCGATGCTGTTCTTCGTGGTCATCGCCGTGGCCCTGGCCATGCAGTCGCTGTGGCCCACAGGCGACAAGAGCGTCA > ACB143/4755885‑4756018 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |