| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | ACB143 | 2,175,073 | A→G | 6.5% | intergenic (‑8/‑174) | CJ019_02064 ← / → CJ019_02065 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | ACB143 | 2,175,073 | 0 | A | G | 6.5% | 456.2 / 15.2 | 139 | intergenic (‑8/‑174) | CJ019_02064/CJ019_02065 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (63/67); new base G (3/6); total (66/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.86e-01 | |||||||||||
Only 100 of 145 total aligned reads displayed.
GAGTACTCACCTTTCTCCAAATTTCTGATGTACCTGACGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGCTCCCGCCTTTAGAGAGTCCTCGGGAA > ACB143/2174938‑2175204 | gagTACTCACCTTTCTCCAAATTTCTGATGTACCTGACGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGACAAAGGCAATTTTGTAATTCATCacgcgta > 3:144349/1‑136 (MQ=255) tCACCTTTCTCCAAATTTCTGATGTACCTGACGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTc > 5:208314/1‑136 (MQ=255) tCACCTTTCTCCAAATTTCTGATGTACCTGACGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTc > 3:291405/1‑136 (MQ=255) tCACCTTTCTCCAAATTTCTGATGTACCTGACGCTGGAGGCAGGATAAAAAGCTTCCTGCGTAAGGCCTCCCTGAACACGCAGTAGGCGGAAAACGCGGCCAAAGGCAATTTAGTAATTAATCacgcgtacgctac > 6:215033/1‑133 (MQ=255) tCACCTTTCTCCAAATTTCTGATGTACCTGAAGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGACTCGCTGCACACGCGGTTGGCGGAATACGCGGCAAAAGGCAATTTTGTAATTAATCACGCGTACGCGTc > 1:75050/1‑136 (MQ=255) aCCTTTCTCCAAATTTCTGATGTACCTGACGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTcc < 1:101422/135‑1 (MQ=255) aCCTTTCTCCAAATTTCTGATGTACCTGACGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTcc > 1:50925/1‑135 (MQ=255) tttCTCCAAATTTCTGATGTACCTGACGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCaaa > 8:220692/1‑134 (MQ=255) tttCTCCAAATTTCTGATGTACCTGACGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCaa > 5:47823/1‑134 (MQ=255) tctcCAAATTTCTGATGTACCTGACGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCaaaa < 5:147402/134‑1 (MQ=255) tctcCAAATTTCTGATGTACCTGACGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAg < 3:186496/135‑1 (MQ=255) ccAAATTTCTGATGTACCTGACGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAg > 1:311924/1‑136 (MQ=255) ccAAATTTCTGATGTACCTGACGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAg > 1:140850/1‑136 (MQ=255) ccAAATTTCTGATGTACCTGACGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAg > 7:10303/1‑136 (MQ=255) ccAAATTTCTGATGTACCTGACGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAg > 7:186267/1‑136 (MQ=255) ccAAATTTCTGATGTACCTGACGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAg > 2:202297/1‑136 (MQ=255) ccAAATTTCTGATGTACCTGACGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCATCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAg > 3:252268/1‑136 (MQ=255) ccAAATTTCTGATGTACCTGACGCTGGCGGCAGGATCAAAAGCTTCCTGCGAAAGGCCTCGCTGAACACGCAGTTTGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCTTACGCGTCCAAAAGGaat > 4:80477/1‑135 (MQ=255) cAAATTTCTGATGTACCTGACGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAg < 6:104318/135‑1 (MQ=255) cAAATTTCTGATGTACCTGACGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGc < 1:308752/136‑1 (MQ=255) aaTTTCTTATGTACCTGACGCTTGCGGCAGGATGAAAAGCTTCCTGCGTTAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGGAATTTTGTAATTCATCACGCGTACGCTTCCAAAAGGAAGCAt < 4:189482/136‑1 (MQ=255) aaTTTCTGATGTACCTGACGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGGAGCAt < 8:221746/136‑1 (MQ=255) aTGTACCTGACGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAAc < 7:20755/133‑1 (MQ=255) aTGTACCTGACGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAAc < 5:259272/133‑1 (MQ=255) tGTACCTGACGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTCTAATTCATCACGCGTACGCCTCCAAAAGGAAGCATTAAAACTAt > 3:291457/1‑136 (MQ=255) ccTGACGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGc < 4:9173/135‑1 (MQ=255) ccTGACGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGc < 4:205253/135‑1 (MQ=255) gACGCTGGCGGCAGGATCAAAAGCTTCCTGCGAAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTc > 6:213794/1‑135 (MQ=255) aCGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAA‑CATTCAACCTATTGCGTCGAg < 4:307177/136‑1 (MQ=255) cTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACACGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGc < 5:40091/136‑1 (MQ=255) tGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAGTACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCa > 8:178629/1‑136 (MQ=255) tGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCa > 6:29084/1‑136 (MQ=255) gcggcAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGTCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCAc < 1:282160/135‑1 (MQ=255) gcggcAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACg < 1:286999/136‑1 (MQ=255) gcggcAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACg < 5:64057/136‑1 (MQ=255) gcggcAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACg < 4:14656/136‑1 (MQ=255) gcggcAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACg < 2:269859/136‑1 (MQ=255) cggcAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCATAAGGAAGCATTCAACCTATTGCGTCGAGGCACg > 4:281430/1‑135 (MQ=255) ggcAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGag > 4:23391/1‑135 (MQ=255) ggcAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGaa > 1:255651/1‑136 (MQ=255) gcAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGaa > 7:8494/1‑135 (MQ=255) gcAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAAc < 6:152065/136‑1 (MQ=255) gcAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACCCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAAc > 5:226363/1‑136 (MQ=255) taTCAAAAGCTTACTGCGTAAGGCCTCGCTGAACACGCAGTTTGCGGAATACGCGGCCAAAGGCAATTTTGTAATTAATCACTCGTACGAGTCCAAAAGGAAGCATTCAACCTATTGAGTCGAGGCAAGAACAGGc < 7:117642/135‑1 (MQ=255) gATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGc < 7:146995/136‑1 (MQ=255) tCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAg > 2:239639/1‑136 (MQ=255) aaaaGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGt < 2:256114/135‑1 (MQ=255) aaaGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTAt < 7:62290/136‑1 (MQ=255) cTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCgg > 3:232716/1‑136 (MQ=255) tGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCaaa < 6:209740/83‑1 (MQ=255) tGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGt > 6:308599/1‑136 (MQ=255) tGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGt > 1:55499/1‑136 (MQ=255) gCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGt > 5:39238/1‑135 (MQ=255) aGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAAc > 1:236136/1‑112 (MQ=255) ggCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCa > 3:219455/1‑136 (MQ=255) ggCCTCGCTGAACACGCAGTTCGCGGAATACGCGGCCAAAGGCAATTTTGTAATTAATCACGCGTGCGCGTCCAAAAGGAAGCAGTCAACCTATTTCGTCGCGGCTCGAACAGGAAGTATGCTGCGGGTTAGGTCa > 2:236483/1‑136 (MQ=255) gCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCAt > 6:191887/1‑136 (MQ=255) cTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCAttt < 2:311924/136‑1 (MQ=255) tGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCAt < 2:261359/77‑1 (MQ=255) tGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGc > 7:295858/1‑136 (MQ=255) tGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGc > 5:122962/1‑136 (MQ=255) cGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCAAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTc < 6:208314/136‑1 (MQ=255) gCAGTAGGCGGAATACCCGGCCAAACGCAATTTTGAAATTCATCACGCGAACGCGTCCAAAAGGAAGCATTCAACCTATTCCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTAACGTAATTTTCTGCGATTTct > 2:153385/1‑135 (MQ=255) ttGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTGACGTCATTTTCTGCGTTTTCGCCtt > 1:203612/1‑136 (MQ=255) tGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCaaa < 5:21121/56‑1 (MQ=255) ggCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTGCGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCttt < 7:111722/135‑1 (MQ=255) ggCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCttt < 1:138379/135‑1 (MQ=255) ggCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTc > 1:214776/1‑136 (MQ=255) ggCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGACGGTTACGTCATTTTCTGCGTTTTCGCCttt < 5:31662/135‑1 (MQ=255) tACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTGCGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATc < 5:175930/136‑1 (MQ=255) tACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATc < 2:19965/136‑1 (MQ=255) cgcgGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCt < 8:55649/135‑1 (MQ=255) cgcgGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATAGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGGTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCt > 1:159154/1‑135 (MQ=255) ccAAAGGCAATTTTGTAATTCATCACGCGTGCGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGc < 5:69842/136‑1 (MQ=255) ccAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGc < 5:141298/136‑1 (MQ=255) ccAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGc < 5:294138/136‑1 (MQ=255) ccAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGc < 6:4467/136‑1 (MQ=255) ccAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGc < 6:65114/136‑1 (MQ=255) ccAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGc < 7:85812/136‑1 (MQ=255) ccAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGc < 3:118736/136‑1 (MQ=255) ccAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGc < 1:277542/136‑1 (MQ=255) ccAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGc < 7:64426/136‑1 (MQ=255) ccAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGc < 7:182940/136‑1 (MQ=255) ccAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGc < 7:64220/136‑1 (MQ=255) ccAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGCTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGc < 1:218640/136‑1 (MQ=255) cAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGAGCt > 6:176084/1‑136 (MQ=255) aaaGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGCTc < 7:27151/136‑1 (MQ=255) aaGGCAATTTTGTAATTCATCACGCGTGCGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGCTcc < 4:159806/136‑1 (MQ=255) ttttGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGCTCCCGCCttt < 7:202003/136‑1 (MQ=255) tgcaaTTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGCTCCCGCCTTTa > 2:39586/4‑134 (MQ=255) tGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGCTCCCGCCTTTa > 2:224720/1‑134 (MQ=255) tGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGCTCCCGCCTTTa > 7:101044/1‑134 (MQ=255) tGTAATTCATCACGCGTACACGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGCTCCCGCCtt > 4:150738/1‑132 (MQ=255) tAATTCATCACGCGTGCGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGCTCCCGCCTTTagaga < 8:60298/136‑1 (MQ=255) aTTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGCTCCCGCCTTTagagag < 2:140850/135‑1 (MQ=255) aTTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGCTCCCGCCTTTagagag < 4:252268/135‑1 (MQ=255) ttCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGCTCCCGCCTTTAGAGAGTc < 3:105156/136‑1 (MQ=255) caCGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCGTTCCGAAATCTGAGTGCTCCCGCCTTTAGAGAGTGCTAgg > 3:198626/1‑136 (MQ=255) cgcgtacgcgtCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGCTCCCGCCTTTAGAGAGTCCTCGGGa < 2:158670/136‑1 (MQ=255) gcgtacgcgtCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGCTCCCGCCTTTAGAGAGTCCTCGGGag > 8:118795/1‑135 (MQ=255) | GAGTACTCACCTTTCTCCAAATTTCTGATGTACCTGACGCTGGCGGCAGGATCAAAAGCTTCCTGCGTAAGGCCTCGCTGAACACGCAGTTGGCGGAATACGCGGCCAAAGGCAATTTTGTAATTCATCACGCGTACGCGTCCAAAAGGAAGCATTCAACCTATTGCGTCGAGGCACGAACAGGCAGTATGCTGCCGGTTACGTCATTTTCTGCGTTTTCGCCTTTCCGAAATCTGAGTGCTCCCGCCTTTAGAGAGTCCTCGGGAA > ACB143/2174938‑2175204 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |