| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | KT2440 | 4,213,235 | G→A | 8.9% | intergenic (‑279/‑94) | CJ019_03953 ← / → CJ019_03954 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | KT2440 | 4,213,235 | 0 | G | A | 8.9% | 235.8 / 11.5 | 79 | intergenic (‑279/‑94) | CJ019_03953/CJ019_03954 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (43/29); new base A (5/2); total (48/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.42e-01 | |||||||||||
CATCCAGGGCAAAACCTTGGAGTCTGACAAACAAGGTGCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGGAGATTTTGGTGTTATTGAATGCCCGCCGCTTTTTCGCTTTGAGTGCC > KT2440/4213100‑4213367 | catccaGGGCAAAACCTTGGAGTCTGACAAACAAGGTGCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATg > 4:328823/1‑136 (MQ=255)catccaGGGCAAAACCTTGGAGTCTGACAAACAAGGTGCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATg > 4:320638/1‑136 (MQ=255) aGGGCAAAACCTTGGAGTCTGACAAACAAGGTGCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCaa > 5:20690/1‑135 (MQ=255) gCAAAACCTTGGAGTCTGACAAACAAGGTGCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAAtt > 6:368065/1‑135 (MQ=255) gCAAAACCTTGGAGTCTGACAAACAAGGTGCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAAtt > 6:258278/1‑135 (MQ=255) aaaaCCTTGGAGTCTGACAAACAAGGTGCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTgg < 1:231127/135‑1 (MQ=255) aaaaCCTTGGAGTCTGACAAACAAGGTGCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTg > 7:217723/1‑134 (MQ=255) aaaaCCTTGGAGTCTGACAAACAAGGTGCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTg > 8:187968/1‑134 (MQ=255) aaaaCCTTGGAGTCTGACAAACAAGGTGCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTg > 2:231127/1‑134 (MQ=255) aaaaCCTTGGAGTCTGACAAACAAGGTGCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATAGCAAATTg > 1:88048/1‑134 (MQ=255) cTTGGAGTCTGACAAACAAGGTGCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCa > 1:10472/1‑135 (MQ=255) cTTGGAGTCTGACAAACAAGGTGCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCa > 8:125665/1‑135 (MQ=255) cTTGGAGTCTGACAAACAAGGTGCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCAc > 3:157543/1‑136 (MQ=255) ggAGTCTGACAAACAAGGTGCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACt < 3:255084/134‑1 (MQ=255) tCTGACAAACAAGGTGCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAg < 3:60749/135‑1 (MQ=255) tCTGACAAACAAGGTGCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAg < 8:301577/135‑1 (MQ=255) cTGACAAACAAGGTGCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGt < 1:156491/135‑1 (MQ=255) acaaacaaGGTGCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCttt < 3:320638/136‑1 (MQ=255) caaacaaGGTGCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTc < 7:198903/132‑1 (MQ=255) caaacaaGGTGCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCtt > 2:8930/1‑134 (MQ=255) caaacaaGGTGCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCtt > 7:249928/1‑134 (MQ=255) caaacaaGGTGCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATATGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCtgt > 5:296043/1‑133 (MQ=255) gCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAAt < 6:224643/135‑1 (MQ=255) gCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAAt < 8:268089/135‑1 (MQ=255) gCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACATACAAt > 2:277033/1‑135 (MQ=255) tAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGCCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGct > 1:238122/1‑135 (MQ=255) tGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCt > 8:188327/1‑134 (MQ=255) gTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCttt > 6:204871/1‑134 (MQ=255) gCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATc < 6:20690/135‑1 (MQ=255) gCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATc < 5:310024/135‑1 (MQ=255) ggTAGGTCAGTATACCGCTGGTCAGGATTCCTCCATATTCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGGAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAgg < 2:238122/135‑1 (MQ=255) gTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAgg < 7:309426/134‑1 (MQ=255) tAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCCCCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTg > 8:360525/1‑135 (MQ=255) cTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCAAACCATGGAAAATTGGAATCACTGAACGTATTTCACATACAATGCGCGGCGCTCACGCTTTAAAATCGGCAGGTGCCg < 5:204871/135‑1 (MQ=255) aaGAATACCGCTTTTAAGGATTCCTCAATAATGTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGAAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGt < 2:155720/134‑1 (MQ=255) aGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGt < 3:334608/134‑1 (MQ=255) aGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTa > 1:235229/1‑135 (MQ=255) aGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTa > 5:7045/1‑135 (MQ=255) gAATACCGGTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTACCCCACGCATGGAAAATTGTAATCACTGCAAGTCTTTGACCTACAATGCGCGTCTCTCACGCTTTAAAATCGGCAGGTGCCGGt < 8:249797/133‑1 (MQ=255) gAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGt < 2:10472/133‑1 (MQ=255) gAATACCGCTTGTAAGGATTCCTCACTAATCTGCGGTATCAGCCCACTCACACAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTAc < 6:142626/135‑1 (MQ=255) aCCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTgg > 1:241546/1‑135 (MQ=255) aCCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTgg > 6:12966/1‑135 (MQ=255) aCCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGa > 4:53771/1‑136 (MQ=255) ttGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATaa > 1:58844/1‑134 (MQ=255) ctgtaTTCCTCAATAATCTGGGGTATCAGCCCACTCACCCAAGCATAGCAATTTGGATTCACTGCAAGTGTTTGACCTACAATCCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGgaga < 2:370712/131‑1 (MQ=255) aGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGGAGAtt > 4:185362/1‑136 (MQ=255) aGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGGAGAtt > 4:216581/1‑136 (MQ=255) aGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGGAGAt > 6:132393/1‑135 (MQ=255) aGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGGAGAt > 6:364253/1‑135 (MQ=255) ggATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGGAGAtt < 8:48823/135‑1 (MQ=255) ggATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCGCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGGAGAtt < 8:249928/135‑1 (MQ=255) ttCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGGAGATTTTg < 5:364253/135‑1 (MQ=255) tcctccATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGGAGATTTTGgt > 3:42081/1‑136 (MQ=255) ctcaATAATCTGCGGTATCAGCCCACTCACACAAGCATGGCAAATTGGAATAACTGCAAGTCTTTTACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCATGTACGTGGATAAGGAGATTttgttg > 1:239838/1‑135 (MQ=255) cATAATCTGCGGTATCATCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGGAGATTTTGGTGTTa > 7:174151/1‑135 (MQ=255) cATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGGAGATTTTGGTGTTa > 2:7959/1‑135 (MQ=255) ggTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGGAGATTTTGGTGTTATTGAATGccc > 8:363573/1‑135 (MQ=255) ggTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGGAGATTTTGGTGTTATTGAATGCccg > 3:341687/1‑136 (MQ=255) ggTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGGAGATTTTGGTGTTATTGAATGCccg > 4:121109/1‑136 (MQ=255) ggTATCAGCCCACTCACCCAAGCATAGCAAATTGGAATCACTGCAAGTCTTTGACCTACAAt > 8:106081/1‑62 (MQ=255) ggTATCAGCCCACTCACCCAAGCATAGCAAATTGGAATCACTGCAAGTCTTTGACCTACAAt < 7:106081/62‑1 (MQ=255) ggTATCAGCCCACTCACCCAAGCATAGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATTCGCGGCTCTCAAGCTTTAAAATCGTCAGGTGCCGGTACGTGGATAAGGAGATTTTGGTGTTATTGAATGCccg > 4:124716/1‑136 (MQ=255) ggTATCAGCCCACTCACCCAAGCATAGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGGAGATTTTGGTGTTATTGAATGcac > 1:114364/1‑133 (MQ=255) ggTATCAGCCCACTCACCCAAGCATAGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGAGGATAAGGAGATTTTGGTGTTATTGAATGCccg > 3:136071/1‑136 (MQ=255) gTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGGAGATTTTGGTGTTATTGAATGCccg < 5:258278/135‑1 (MQ=255) tATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCAGGTACGTGGATAAGGAGATTTTGGTGTTATTGAATGCccgc > 8:358104/1‑135 (MQ=255) aTCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGAGAAGGAGATTTTGGTGTTATTGAATGCccgcc > 7:10716/1‑135 (MQ=255) cccACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGGAGATTTTGGTGTTATTGAATGCCCGCCGCttt < 8:182846/135‑1 (MQ=255) cACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGGAGATTTTGGTGTTATTGAATGCCCGCCGCttttt > 6:67976/1‑135 (MQ=255) aCCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATc < 4:275713/71‑1 (MQ=255) aCCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATc > 3:275713/1‑71 (MQ=255) aCCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGgaga > 8:33818/1‑99 (MQ=255) aCCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGgaga < 7:33818/99‑1 (MQ=255) aCCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGGAGATTTTGGTGTTATTGAATGCCCGCCGCTTTTTCGCttt > 4:85583/1‑136 (MQ=255) aCCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGGAGATTTTGGTGTTATTGAATGCCCGCCGCTTTTTAGCtt > 1:367103/1‑135 (MQ=255) ccAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGGAGATTTTGGTGTTATTGAATGCCCGCCGCTTTTTCGCtt > 5:363930/1‑133 (MQ=255) cATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGGAGATTTTGGTGTTATTGAATGCCCGCCGCTTTTTCGCTTTGAGTGc < 5:368065/135‑1 (MQ=255) cATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGGAGATTTTGGTGTTATTGAATGCCCGCCGCTTTTTCGCTTTGAGTGc < 7:187968/135‑1 (MQ=255) cATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGGAGATTTTGGTGTTATTGAATGCCCGCCGCTTTTTCGCTTTGAGTGc < 2:145436/135‑1 (MQ=255) aTGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGGAGATTTTGGTGTTATTGAATGCCCGCCGCTTTTTCGCTTTGAGTGcc > 6:217782/1‑135 (MQ=255) | CATCCAGGGCAAAACCTTGGAGTCTGACAAACAAGGTGCCCGTTCTAGACGTATTGGTGAGGCACTGGGTAGCTCAGAATACCGCTTGTCAGGATTCCTCCATAATCTGCGGTATCAGCCCACTCACCCAAGCATGGCAAATTGGAATCACTGCAAGTCTTTGACCTACAATGCGCGGCTCTCACGCTTTAAAATCGGCAGGTGCCGGTACGTGGATAAGGAGATTTTGGTGTTATTGAATGCCCGCCGCTTTTTCGCTTTGAGTGCC > KT2440/4213100‑4213367 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |