| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | KT2440 | 4,546,287 | T→C | 6.0% | intergenic (‑34/+64) | rutR_2 ← / ← CJ019_04309 | HTH‑type transcriptional regulator RutR/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | KT2440 | 4,546,287 | 0 | T | C | 6.0% | 219.8 / 3.5 | 67 | intergenic (‑34/+64) | rutR_2/CJ019_04309 | HTH‑type transcriptional regulator RutR/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (38/25); new base C (2/2); total (40/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.11e-01 | |||||||||||
AGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGCCATCAGGCTTGGGCCGTCCACACCGCCAGCTCATAACCGTCAGGGTCGATGAAATGAAAGCGCCGCCCGCCG > KT2440/4546153‑4546420 | agcagGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCt > 8:353513/1‑135 (MQ=255)agcagGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCt > 8:221273/1‑135 (MQ=255) agGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTc > 4:222470/1‑136 (MQ=255) ggTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCCTCGCGCAACCCCCTTTTcc > 4:8726/1‑136 (MQ=255) tGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTccgccg > 7:170905/1‑135 (MQ=255) cagcaCCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCCTTTCCGCCGCtt > 4:44419/1‑136 (MQ=255) cagcaCCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCCTTTCCGCCGCtt > 4:49200/1‑136 (MQ=255) gcaCCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACCCCTTTTCCGCCGCTTg > 1:183635/1‑135 (MQ=255) caCCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTAGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCtt > 5:298027/1‑133 (MQ=255) cgtggAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGAtt > 3:170071/4‑136 (MQ=255) cgcgGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGAt > 6:326191/1‑135 (MQ=255) ggAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGAttttt > 4:71777/1‑136 (MQ=255) ggAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGAttttt > 4:170500/1‑136 (MQ=255) ggAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGAttttt > 4:83142/1‑136 (MQ=255) ggAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGAtttt > 5:344795/1‑135 (MQ=255) ggAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGAtttt > 1:69571/1‑135 (MQ=255) gTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCTGGATTTTTTCGATATTg > 6:324933/1‑135 (MQ=255) gTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGc > 3:84845/1‑136 (MQ=255) ccTTGGTGCTGAATTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGACCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACCACTTTTCCGCCGCTTTCAGGATGTTTTCGATATTGCg > 5:160125/1‑135 (MQ=255) tGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTcg > 8:106230/1‑135 (MQ=255) tGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGAt < 8:170905/135‑1 (MQ=255) tGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTAGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGa < 6:298027/134‑1 (MQ=255) gTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGa > 3:29023/1‑136 (MQ=255) taataaTGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGAt > 4:248023/1‑136 (MQ=255) atGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTtg > 5:4331/1‑135 (MQ=255) aGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGa < 1:23859/134‑1 (MQ=255) ttGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGc < 3:83142/136‑1 (MQ=255) ttGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCCTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGc < 3:44419/136‑1 (MQ=255) ttGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGACCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCCTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGGCGGCGGATTTCGATCTTGTGATTGGc < 3:49200/136‑1 (MQ=255) tGGAGCGTGGCAGCTGAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGc < 6:329209/135‑1 (MQ=255) tGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTgg > 8:67028/1‑134 (MQ=255) tGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTgg > 7:306530/1‑134 (MQ=255) tGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGc < 5:145254/135‑1 (MQ=255) tGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGc < 6:4331/135‑1 (MQ=255) tGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGc < 5:258691/135‑1 (MQ=255) tGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGc < 2:69571/135‑1 (MQ=255) tGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGc < 2:50348/135‑1 (MQ=255) tGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGc < 8:306530/135‑1 (MQ=255) tGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGc < 5:69210/135‑1 (MQ=255) tGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGAAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGc < 7:267379/135‑1 (MQ=255) gCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGCCATCAGGCt < 6:242998/135‑1 (MQ=255) aGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGc > 5:29197/1‑124 (MQ=255) aGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGc < 6:29197/124‑1 (MQ=255) aGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGCCATCAGGCTTg > 2:19853/1‑135 (MQ=255) gCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGCCATCAGGCTTggg < 3:71777/136‑1 (MQ=255) aGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGa > 5:366199/1‑114 (MQ=255) aGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGa < 6:366199/114‑1 (MQ=255) aGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGCCATCAGGCTTGGGCCg > 6:109737/1‑135 (MQ=255) ccTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGCCATCAGGCTTGGGCCGTc < 7:353513/135‑1 (MQ=255) ggCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATAGGCCATCAGGCTTGGGCCGGCCACACCg > 5:7664/1‑135 (MQ=255) gCCCATGGAGGTGGCGCCGTAGCCCCTCTCGCAAACACCTTTTCAGCCGCTTGCAGGATTTTTTCGCTATTGCGTCGGCGGATTTCGATCTTGTGATTGGCCATCAGGCGTGGGCCGTCCACACCGCCAGCt < 3:8726/132‑1 (MQ=255) cccATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGCCATCAGGCTTGGGCCGTCCACACCGCCAGCTCATa > 1:23036/1‑135 (MQ=255) aTGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGCCATCAGGCTTGGGCCGTCCACACCGCCAGCTCATAAcc < 2:23036/135‑1 (MQ=255) aGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGCCATCAGGCTTGGGCCGTCCACACCGCCAGCTCATAACCGTCa < 5:326191/135‑1 (MQ=255) aGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGCCATCAGGCTTGGGCCGTCCACACCGCCAGCTCATAACCGTCAg > 4:147839/1‑136 (MQ=255) ggTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGCCATCAGGCTTGGGCCGTCCACACCGCCAGCTCATAACCGTCAg > 1:295842/1‑135 (MQ=255) gcgcCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGCCATCAGGCTTGGGCCGTCCACACCGCCAGCTCATAACCGTCAGGGt > 2:210958/1‑134 (MQ=255) gcCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGCCATCAGTCTTGGGCCGTCCCCACCGCCAGCTCATACCCGTCAGGGTCGa > 6:216086/1‑135 (MQ=255) gcCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGCCATCAGGCTTGGGCCGTCCACACCGCCAGCTCATAACCGTCAGGGTCGa > 5:82947/1‑135 (MQ=255) cGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGCCATCAGGCTTGGGCCGTCCACACCGCCAGCTCATAACCGTCAGGGTCGat > 2:230773/1‑134 (MQ=255) cGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCAATCTTGTGATTGGCCATCAGGCTTGGGCCGTCCACACCGCCAGCTCATAACCGTCAGGGTCGATGAAATGAAAGcgcc > 4:180780/1‑136 (MQ=255) gCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTtgtg < 7:240196/65‑1 (MQ=255) gCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTtgtg > 8:240196/1‑65 (MQ=255) gCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGCCATCAGGCTTGGGCCGTCCacac < 6:89054/94‑1 (MQ=255) gCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGCCATCAGGCTTGGGCCGTCCacac > 5:89054/1‑94 (MQ=255) gCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGCCATCAGGCTTGGGCCGTCCACACCGCCAGCTCATAACCGTCAGGGTCGATGAAATGAAAGcgccg > 3:179470/1‑136 (MQ=255) gCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGCCATCAGGCTTGGGCCGTCCACACCGCCAGCTCATAACCGTCAGGGTCGATGAAATGAAAGcgcc > 8:104775/1‑135 (MQ=255) ccTTTTCCGCCGCTTGCAGTTTTTTTTCGATATGGCGTCGGCGGATTTCGATCTTGTGATGGGCCATCAGGCTTGGGCCGTCCACACCGCCAGCTCAAAACCGTCAGGGTCGATGAAATGAAAGCGCCGCccgccg < 4:29023/136‑1 (MQ=255) cTTTTCCGCCGCTTGCAGTATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGCCATCAGGCTGGGGCCGTCCACACCGCCAGCTCATAACCGTCAGGGTCGAGGAAATGAAAGCGCCGCccgccg < 7:221273/135‑1 (MQ=255) | AGCAGGTCCTGCAGCACCGCGCGGAACAGCTCGTCCTTGGTGCTGAAGTAATAATGCAGGTTGGAGCGTGGCAGCTCAGCCTGCTCGGCGATATCGCCCATGGAGGTGGCGCCGTAGCCCTTCTCGCAAACACCTTTTCCGCCGCTTGCAGGATTTTTTCGATATTGCGTCGGCGGATTTCGATCTTGTGATTGGCCATCAGGCTTGGGCCGTCCACACCGCCAGCTCATAACCGTCAGGGTCGATGAAATGAAAGCGCCGCCCGCCG > KT2440/4546153‑4546420 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |