| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | KT2440 | 3,850,110 | A→C | 16.3% | F117V (TTC→GTC) | eamB_1 ← | Cysteine/O‑acetylserine efflux protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | KT2440 | 3,850,110 | 0 | A | C | 16.3% | 154.6 / 2.2 | 82 | F117V (TTC→GTC) | eamB_1 | Cysteine/O‑acetylserine efflux protein |
| Reads supporting (aligned to +/- strand): ref base A (37/29); new base C (2/14); total (39/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.89e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGCTGGGCAAGTTGACCAAAGCGAACAAGGCCGCAATGACGATCACGTTGGTTACATAGCCTTGCGCTGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGGCGGCGCCAGCGTAGCGCAGCACCGT > KT2440/3849981‑3850236 | cGCTGGGCAATTTGACCAAAGCGAACAAGGCCGCAATGACGATCACGTTGGTTACATAGCCTTGCGCTGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAAcgccg < 7:77147/135‑1 (MQ=255)cGCTGGGCAAGTTGACCAAAGCGAACAAGGCCGCAATGACGATCACGTTGGTTACATAGCCTTGCGCTGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGTGGTTGACCCACTGGAAcgccg < 6:154934/135‑1 (MQ=255)cGCTGGGCAAGTTGACCAAAGCGAACAAGGCCGCAATGACGATCACGTTGGTTACATAGCCTTGCGCTGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAAcgccg < 5:220979/135‑1 (MQ=255) gCTGGGCAAGTTGACCAAAGCGAACAAGGCCGCAATGACGATCACGTTGGTTACATAGCCTTGCGCTGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAAcgccgc > 1:252520/1‑135 (MQ=255) cTGGGCAAGTTGACCAAAGCGAACAAGGCCGCAATGACGATCACGTTGGTTACATAGCCTTGCGCTGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGACcgccgcc > 3:96073/1‑135 (MQ=255) cTGGGCAAGTTGACCAAAGCGAACAAGGCCGCAATGACGATCACGTTGGTTACATAGCCTTGCGCTGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAAcgccgcc > 8:95981/1‑135 (MQ=255) cTGGGCAAGTTGACCAAAGCGAACAAGGCCGCAATGACGATCACGTTGGTTACATAGCCTTGCGCTGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAAcgccgcc > 5:299268/1‑135 (MQ=255) cTGGGCAAGTTGACCAAAGCGAACAAGGCCGCAATGACGATCACGTTGGTTACATAGCCTTGCGCTGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAAcgccgcc > 5:130442/1‑135 (MQ=255) ggCAAGTTGACCAAAGCGAACAAGGCCGCAATGACGATCACGTTGGTTACATAGCCTTGCGCTGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCa > 6:122593/1‑135 (MQ=255) gCAAGTTGACCAAAGCGAACAAGGCCGCAATGACGATCACGTTGGTTACATAGCCTTGCGCTGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCAc > 8:337962/1‑135 (MQ=255) aaGTTGACCAAAGCGAACAAGGCCGCAATGACGATCACGTTGGTTACATAGCCTTGCGGTGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCAccc < 6:269326/135‑1 (MQ=255) aaGTTGACCAAAGCGAACAAGGCCGCAATGACGATCACGTTGGTTACATAGCCTTGCGCTGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCAccc > 6:35692/1‑135 (MQ=255) aaGTTGACCAAAGCGAACAAGGCCGCAATGACGATCACGTTGGTTACATAGCCTTGCGCTGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCAcc > 7:205954/1‑134 (MQ=255) aaGTTGACCAAAGCGAACAAGGCCGCAATGACGATCACGTTGGTTACATAGCCTTGCGCTGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCAcc > 8:172414/1‑134 (MQ=255) aaGTTGACCAAAGCCAACAAGGCCGCAATGACGAGCACGTTGGTTACATAGCCTTGCGCTGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCAccc < 5:46337/135‑1 (MQ=255) gTTGACCAAAGCGAACAAGGCCGCAATGACGATCACGTTGGTTACATAGCCTTGCGCTGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCAcc > 2:254514/1‑132 (MQ=255) acaGCGAACCAGGCCGCAATGACGATCACGTTGGTTACATAGCCTTGCGCTGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCCAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGccc < 7:273465/133‑1 (MQ=255) aaGCGAACAAGGCCGCAATGACGATCACGTTGGTTACATAGCCTTGCGCTGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGACGCCCa > 7:76586/1‑135 (MQ=255) aaCAAGGCCGCAATGACGATCACGTTGGTTACATAGCCTTGCGCTGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGt < 5:122593/135‑1 (MQ=255) gCCGCAATGACGATCACGTTGGTTACATAGCCTTGCGGTGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCgg < 2:287159/135‑1 (MQ=255) gCCGCAATGACGATCACGTTGGTTACATAGCCTTGCGCTGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCgg < 5:35692/135‑1 (MQ=255) ccaTCCCGTGGGTTACATCGCTTTGCGGTGGGGTTTAGGGGGTAAGCGCCCCTACGGCAATCACCCACGCCTTGGGGTTCACCCACTGGACCGCCGCCGCACCCCAGACGCCCAGCGGTTTGCGGGCACTGGAcg < 6:57566/133‑1 (MQ=255) aTCACGTTGGTTACATAGCCTTGCGCTGGCGTGTAGGTGGTAATCGCCCCTACCGCCCTCACCCAAGCCTTGGGGTTGACCCCCTGTAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGAcgcg > 2:194263/1‑135 (MQ=255) aCATAGCCTTGCGCTGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGACCGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGCCGCGGCCGTGCCGccc > 6:327524/1‑135 (MQ=255) aCATAGCCTTGCGCTGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCCCCCCAGAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGAcc > 8:221734/1‑135 (MQ=255) ccTTGCGCTGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGGTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCg > 3:186798/1‑135 (MQ=255) tGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCCCGGGACGCGGCCGGGCCGACCGGCCCGGGAGTggg > 5:128141/1‑134 (MQ=255) tGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGc > 5:83168/1‑135 (MQ=255) tgtAGGTGGTAATCGCCCCTACCGCCCTCAACCAAGCCTTGGGGGTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCCGCGGTTTGCGGGCACAGGACGCGGCCGGGCCGACCGGCCCGGAAggggagttga > 3:7050/1‑129 (MQ=255) tgtAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGCCCCACTGGAACGCCGCCGCACCCCAGAAGCCCCGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGCAGTgggggggg > 8:134817/1‑129 (MQ=255) tgtAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGCACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGCCGCGGCCGTGCCGCCCGGCCCGGCAGTggggctcg > 5:161799/1‑129 (MQ=255) tgtAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAAcgccg < 7:243930/63‑1 (MQ=255) tgtAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAAcgccg > 8:243930/1‑63 (MQ=255) tgtAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGGGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTgg < 7:29820/129‑1 (MQ=255) tgtAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCCCTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGctct > 7:41628/1‑135 (MQ=255) tgtAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGCAGGGGCggacg > 6:206434/1‑131 (MQ=255) tgtAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTgg > 8:29820/1‑129 (MQ=255) tgtAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATcg > 3:301242/1‑134 (MQ=255) tcaaGGTGGTAATCGCCCCTACCGCAAAAACCAAATCATATGGCTTGACACACTGGAACGCCGCCGCACCCCACAAGCCCAGCGCTTTGCGGGCACTGGACGCGGCCGTCCCGACCGGCCCGCAAGTGGCGATca > 4:105933/4‑134 (MQ=255) cgcgtgtAAGCCCCCCCCCCGCCATCCCCCCACCCTTGGGGTTCACCCACTGGACCGCCCCCGCCCCCCCGAACCCCCGCGGTTGGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTcc < 1:73734/130‑1 (MQ=255) gtggtAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGTAGTGGCGATCATccag > 8:258162/1‑135 (MQ=255) aaTCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCTCTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTccaggccag > 1:15139/1‑135 (MQ=255) aaTCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGcc > 7:219487/1‑102 (MQ=255) aaTCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGcc < 8:219487/102‑1 (MQ=255) aaTCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTccaggccag > 3:80425/1‑135 (MQ=255) aaTCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAACTGGCGCTCGTacaggccag > 2:168433/1‑135 (MQ=255) agcGCCCCTCCCGCCACCACCCACGCCTGGGGGTGCACCCACGGCCCCGCCGCCCCCCCCCAGACCCCCCGCGGTTGGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTccaggccagg < 4:186798/133‑1 (MQ=255) accGCCCCTCCCGACATCACCCAAGCCTTGGGTTTCCCCCACTGGAACGCCGCCGCCCCCCACAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTccaggccag < 1:254514/132‑1 (MQ=255) gcGCCCCTCCCGCCATCACCCAAGCCTTGGGGTTGACCCACTGCAACGCCGCCGCACCCCAGAAGCCCCGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGt < 1:112690/134‑1 (MQ=255) cTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTaaa > 3:140924/1‑132 (MQ=255) cGCCATCACCCACGCCTTGGGGTTGCCACCCTGCCCGGCCGCCGCACCCCCGACGCCCCGCGGTTTGCGGGACCTGGACGCGGCCGTGCCGACCGGCCCGGAAGGGGCTATCTTCCAGGCCAGGTAAAGCAGATa < 4:28149/135‑1 (MQ=255) cGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATa < 4:140924/135‑1 (MQ=255) caaTCACCAAAGCCTTGGGGTTTACCCACTGCACCGCCGCCGCACCCCAGACCCCCAGCGGTTGGGGGCCACGGGCCGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAgg < 3:105933/133‑1 (MQ=255) tCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAggcgg < 7:266501/135‑1 (MQ=255) acACCCACGCCTTGGGGTTGCCCCACTGGACCGCCGCCGCACCCCAGAAGCCCAGGGGTTTGCGGGCAGTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAggcgg < 7:337962/134‑1 (MQ=255) aCCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGgcggcg > 6:15215/1‑135 (MQ=255) cccaccccTTGGGGTGGACCCACTGCAACGCCGCCGCCCCCCAGAAGCCCAGCGGTTTGCGGGCACGGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGGCGgcgc < 4:301242/129‑1 (MQ=255) cacgcgttGGGGTTCACCCACGGCACCCCCGCCCCACCCCAGACGCCCCGCGGTTGGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGGCGGCGCCa < 1:677/129‑1 (MQ=255) cacgCCTTGGGGTTGACCCACTGCAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGGCGGCGCCa < 4:163536/132‑1 (MQ=255) cacgCCTTGGGGAGGACCCAGTGCAACGCCCCCGCACCCCAGACGCCCAGCGGTTTGCGGGCACTGCACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGGCGGCGCCa < 6:89905/132‑1 (MQ=255) cacgCCTGGGGGTTGACCCACTGGACCGCCGCCGCCCCCCCCACGCCCCGCGGTTTGCGGGCACGGGCCGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGGCGGCGCCa < 8:67217/132‑1 (MQ=255) caccccTTGGGGTTCACCCACGGGACCGCCGCCGCACCCCAGAAGCCCAGCGGTTGGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGGCGGCGCCa < 1:75111/131‑1 (MQ=255) cAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGGCGGCGCCa < 6:83168/135‑1 (MQ=255) cAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGGAAAGCAGATAGGCGGCGCCa > 4:271841/1‑135 (MQ=255) cAAGCCTGGGGGTTGACCCACTGGACCGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGGCGGCGCCa < 8:329018/135‑1 (MQ=255) aacgCCTTGGGGTTGACCCACTGCAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGGCGGCGCCa < 7:45626/132‑1 (MQ=255) cTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGGCGGCGCCAGCGTa > 2:116055/1‑135 (MQ=255) ttGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAATCAGATAAGCCGCGCCACCGTAg > 4:322547/1‑135 (MQ=255) gggggTTGACCCACTGTACCGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGCCGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGGCGGCGCCAGCGTAgc < 6:161799/134‑1 (MQ=255) ggttcccccACTGTAACGCCGCCGCACCCCAGACGCCCCGCGGTTGGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGGCGGCGCCAGCGTAGCgca < 7:95981/129‑1 (MQ=255) ggtggccccACTGCAACGCCGCCGCACCCCAGACGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGGCGGCGCCAGCGTAGCgca < 6:130442/129‑1 (MQ=255) ggtgccccccCTGCACCGCCGCCCCACCCCCCCCGCCCCGCGGTTGGCGGGCACTGCCCGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGGCGGCGCCAGCGTAGCgca < 7:134817/129‑1 (MQ=255) ggTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCCGGGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGGCGGCGCCAGCGTAGCgca < 4:96073/135‑1 (MQ=255) ggTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCCGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGGCGGCGCCAGCGTAGCgca < 4:80425/135‑1 (MQ=255) ggTTGACCCACTGCAACGCCGCCGCACCCCAGACGCCCAGGGGTTTGCGGGCACGGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGGCGGCGCCAGCGTAGCgca < 6:134190/135‑1 (MQ=255) ggTTGACCCACGGGACCGCCGCCGCACCCCAGAAGCCCAGCGGTTGGCGGGCACGGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGGCGGCGCCAGCGTAGCgca < 8:72944/135‑1 (MQ=255) ggTTCACCCACTGCAACGCCGCCGCCCCCCTGACGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGGCGGCGCCAGCGTAGCgca < 6:299268/135‑1 (MQ=255) ttcaCCCACTGGACCGCCGCCGCACCCCAGAAGCCCCGCGGTTTGGGGGCACTGGCCGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGGCGGCGCCAGCGTAGCgcagc < 2:15139/132‑1 (MQ=255) ttGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGGCGGCGCCAGCGTAGCgcagc < 8:205954/135‑1 (MQ=255) ccACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGGCGGCGCCAGCGTAGCGCAGCACCgt > 3:81562/1‑135 (MQ=255) ccACTGGAACGCCGCCGCACCCCACACGCCCCGCGGTTTGCGGGCACGGGCCGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGGCGGCGCCAGCGTAGCGCAGCACCgt < 2:106624/135‑1 (MQ=255) cACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGGCGGCGCCAGCGTAGCGCAGCACCgt > 2:12442/1‑134 (MQ=255) | CGCTGGGCAAGTTGACCAAAGCGAACAAGGCCGCAATGACGATCACGTTGGTTACATAGCCTTGCGCTGGCGTGTAGGTGGTAATCGCCCCTACCGCCATCACCCAAGCCTTGGGGTTGACCCACTGGAACGCCGCCGCACCCCAGAAGCCCAGCGGTTTGCGGGCACTGGACGCGGCCGTGCCGACCGGCCCGGAAGTGGCGATCTTCCAGGCCAGGTAAAGCAGATAGGCGGCGCCAGCGTAGCGCAGCACCGT > KT2440/3849981‑3850236 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |