| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | KT2440 | 4963351 = | 66 (0.890) | 6 (0.090) | 6/232 | 5.9 | 9.0% | coding (715/2064 nt) | CJ019_04659 | hypothetical protein |
| ? | KT2440 | = 4963347 | 62 (0.930) | coding (719/2064 nt) | CJ019_04659 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CACCGGTGCAGCCGGTAAGTTCGGCACCAACAATGCTGGCAGCACTTCTGCTTCGGTTGTGGGTACTGCAGGCGCGGGCGTATTTGATAAGCCGACCATCGGTGCTGCTGCCGGTAACTTGGTGCTGAACGTTGGTACCACCACCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < KT2440/4963499‑4963351‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accaccaccaccaTCGCTGCTGCGGCAGGCGACACCCTGCAGGATGTGGTTGACAATATCAACCTGGAAACTAGCAATACCGGTGTTACCGCTAGCATTGACAGCGCCACTGGTGCACTGAAGCTCGACGGCACCCAGGCATTCACC < KT2440/4963347‑4963214 CACCGGTGCAGCCGGTAAGTTCGGCACCAACAATGCTGGCAGCACTTCTGCTTCGGTTGTGGGTACTGCAGGCGCGGGCGTATTTGATAAGCCGACCATCGGTGCTGCTGCCGGTAACTTGGTGCTGAACGTTGGTA > 7:61223/1‑137 GGTGCAGCCGGTAAGTTCGGCACCAACAATGCTGGCAGCACTTCTGCTTCGGTTGTGGGTACTGCAGGCGCGGGCGTATTTGATAAGCCGACCATCGGTGCTGCTGCCGGTAACTTGGTGCTGAACGTTGGTACCAC < 4:281932/137‑1 GTGCAGCCGGTAAGTTCGGCACCAACAATGCTGGCAGCACTTCTGCTTCGGTTGTGGGTACTGCAGGCGCGGGCGTATTTGATAAGCCGACCATCGGTGCTGCTGCCGGTAACTTGGTGCTGAACGTTGGTACCACC < 8:152365/137‑1 gGCAGCCGGTAAGTTCGGCACCAACAATGCTGGCAGCACTTCTGCTTCGGTTGTGGGTACTGCAGGCGCGGGCGTATTTGATAAGCCGACCATCGGTGCTGCTGCCGGTAACTTGGTGCTGAACGTTGGTACCACCA < 4:335986/136‑1 AGCCGGTAAGTTCGGCACCAACAATGCTGGCAGCACTTCTGCTTCGGTTGTGGGTACTGCAGGCGCGGGCGTATTTGATAAGCCGACCATCGGTGCTGCTGCCGGTAACTTGGTGCTGAACGTTGGTACCACCACCA > 6:238279/1‑137 TTCGGCACCAACAATGCTGGCAGCACTTCTGCTTCGGTTGTGGGTACTGCAGGCGCGGGCGTATTTGATAAGCCGACCATCGGTGCTGCTGCCGGTAACTTGGTGCTGAACGTTGGTACCACCACCACCATCGCTGC > 4:143512/1‑137 CGGTTGTGGGTACTGCAGGCGCGGGCGTATTTGATAAGCCGACCATCGGTGCTGCTGCCGGTAACTTGGTGCTGAACGTTGGTACCACCACCACCATCGCTGCTGCGGCAGGCGACACCCTGCAGGATGTGGTTGAC > 1:3180/1‑137 GGCGTATTTGATAAGCCGACCATCGGTGCTGCTGCCGGTAACTTGGTGCTGAACGTTGGTACCACCACCACCATCGCTGCTGCGGCAGGCGACACCCTGCAGGATGTGGTTGACAATATCAACCTGGAAACTAGCAA < 2:3180/137‑1 GCCGACCATCGGTGCTGCTGCCGGTAACTTGGTGCTGAACGTTGGTACCACCACCACCATCGCTGCTGCGGCAGGCGACACCCTGCAGGATGTGGTTGACAATATCAACCTGGAAACTAGCAATACCGGTGTTACCG > 5:35360/1‑137 TGCCGGTAACTTGGTGCTGAACGTTGGTACCACCACCACCATCGCTGCTGCGGCAGGCGACACCCTGCAGGATGTGGTTGACAATATCAACCTGGAAACTAGCAATACCGGTGTTACCGCTAGCATTGACAGCGCCA < 6:35360/137‑1 TGGTACCACCACCACCATCGCTGCTGCGGCAGGCGACACCCTGCAGGATGTGGTTGACAATATCAACCTGGAAACTAGCAATACCGGTGTTACCGCTAGCATTGACAGCGCCACTGGTGCACTGAAGCTCGACGGCA < 1:302141/137‑1 CCACCACCACCATCGCTGCTGCGGCAGGCGACACCCTGCAGGATGTGGTTGACAATATCAACCTGGAAACTAGCAATACCGGTGTTACCGCTAGCATTGACAGCGCCACTGGTGCACTGAAGCTCGACGGCACCCAG > 1:21838/1‑137 CCACCATCGCTGCTGCGGCAGGCGACACCCTGCAGGATGTGGTTGACAATATCAACCTGGAAACTAGCAATACCGGTGTTACCGCTAGCATTGACAGCGCCACTGGTGCACTGAAGCTCGACGGCACCCAG > 3:93408/1‑131 CCACCATCGCTGCTGCGGCAGGCGACACCCTGCAGGATGTGGTTGACAATATCAACCTGGAAACTAGCAATACCGGTGTTACCGCTAGCATTGACAGCGCCACTGGTGCACTGAAGCTCGACGGCACCCAG < 4:93408/131‑1 CCATCGCTGCTGCGGCAGGCGACACCCTGCAGGATGTGGTTGACAATATCAACCTGGAAACTAGCAATACCGGTGTTACCGCTAGCATTGACAGCGCCACTGGTGCACTGAAGCTCGACGGCACCCAGGCATTCACC < 6:314981/137‑1 CCATCGCTGCTGCGGCAGGCGACACCCTGCAGGATGTGGTTGACAATATCAACCTGGAAACTAGCAATACCGGTGTTACCGCTAGCATTGACAGCGCCACTGGTGCACTGAAGCTCGACGGCACCCAGGCATTCACC < 8:175046/137‑1 CACCGGTGCAGCCGGTAAGTTCGGCACCAACAATGCTGGCAGCACTTCTGCTTCGGTTGTGGGTACTGCAGGCGCGGGCGTATTTGATAAGCCGACCATCGGTGCTGCTGCCGGTAACTTGGTGCTGAACGTTGGTACCACCACCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < KT2440/4963499‑4963351‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accaccaccaccaTCGCTGCTGCGGCAGGCGACACCCTGCAGGATGTGGTTGACAATATCAACCTGGAAACTAGCAATACCGGTGTTACCGCTAGCATTGACAGCGCCACTGGTGCACTGAAGCTCGACGGCACCCAGGCATTCACC < KT2440/4963347‑4963214 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |