Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*KT2440411,3390CA26.7% 165.2 / 14.9 76F24L (TTC→TTA) kdkA_13‑deoxy‑D‑manno‑octulosonic acid kinase
Reads supporting (aligned to +/- strand):  ref base C (10/45);  new base A (20/0);  total (31/45)
Fisher's exact test for biased strand distribution p-value = 3.74e-11
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

TGGAGCGCAAGGCCCAGAAACTCTACGATCGCAAGCAACGCTATGGGGATGCACTCTGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACTACTACGTCAAGCGCTACACCGGGGCCGGCAAGCACATGCGCCGGTACCTGGGGCGGCCACG  >  KT2440/411210‑411473
                                                                                                                                 |                                                                                                                                      
tggAGCGCAAGGCCCAGAAACTCTACGATCGCAAGCAACGCTATGGGGATGCACTCTGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTcc                                                                                                                                 <  7:341645/137‑1 (MQ=255)
   aGCGCAAGGCCCAGAAACTCTACGATCGCAAGCAACGCTATGGGGATGCACTCTGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTAGCCCTCCAgg                                                                                                                              >  2:111445/1‑137 (MQ=255)
      gcAAGGCCCAGAAACTCTACGATCGCAAGCAACGCTATGGGGATGCACTCTGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCACCCCGGCg                                                                                                                           >  2:272534/1‑137 (MQ=255)
        aaGGCCCAGAAACTCTACGATCGCAAGCAACGCTATGGGGATGCACTCTCATGGCGAGTAGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTAGCCCTCCAGGGCGaa                                                                                                                         >  7:441112/1‑137 (MQ=255)
               ataaaCTCTACGATCGCAAGCAACGCTATGGGGATGCACTCTGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTga                                                                                                                  <  6:20937/135‑1 (MQ=255)
                    ctctACGATCGCAAGCAACGCTATGGGGATGCACTCTGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTgacccgc                                                                                                             <  5:423560/137‑1 (MQ=255)
                       tACGATCGCAAGCAACGCTATGGGGATGCACTCTGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTATCCCGCCAGGGCGCACGGCTgacccccgac                                                                                                          >  4:381156/1‑137 (MQ=255)
                         cGATCGCACGCAACGCTATGGGGAGGCACTCTGATGGCGAGTTCGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTgacccgcgaccc                                                                                                        <  4:440953/137‑1 (MQ=255)
                         cGATCGCAAGCAACGCTATGGGGATGCACTCTGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTAGCCCTCCAGGGCGAACGGCTgacccgcgaccc                                                                                                        >  3:325217/1‑137 (MQ=255)
                         cGATCGCAAGCAACGCTATGGGGATGCACTCTGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTAGCCCCCCACGGCCAACCGCGgacccccgcccc                                                                                                        >  3:440953/1‑137 (MQ=255)
                          gATCGCAAGCAACGCTATGGGGATGCACTCTGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTAGCCCACCAGGGCGAACCGCTgaaccgccccccc                                                                                                       >  7:56504/1‑131 (MQ=255)
                              gcaagcaaCGCTATGGGGATGCACTCTGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTAGCCCTCCAGGGCGAACGGCTGACCCGCGCCCCGCTcc                                                                                                   >  5:193010/1‑136 (MQ=255)
                                aagcaaCGCTATGGGTATGCACTGTGTTGGAGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCTGGGCGAACGGCTGACCCGCGACCCGCTCAGt                                                                                                 <  2:61456/137‑1 (MQ=255)
                                      cGCTAGGGGGATGCAATCTGATGGCGAGTTGGACCCTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGGGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTg                                                                                           <  5:35209/137‑1 (MQ=255)
                                           tGGGGATGCACTCTGATGGCGAGTTGGCCACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCTGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACg                                                                                      <  6:436187/137‑1 (MQ=255)
                                           tGGGGAAGCACTCTGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTAGCCAGCCTCTACGAGGTGTTAGCCCTCCCCGGCGAACGGCTGACCCGCCCCCCCCTCACTGAATTGGTTCg                                                                                      >  7:380808/1‑137 (MQ=255)
                                              ggATGCACTCTGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGcccg                                                                                                                                   >  1:262125/1‑88 (MQ=255)
                                              ggATGCACTCTGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCt                                                                                                                                   <  2:262125/89‑1 (MQ=255)
                                                   cACTCTGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGc                                                                              >  7:324711/1‑137 (MQ=255)
                                                   cACTCTGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTAGCCCTCCAGGGCGAACCGCAGACCCCCGACCCCCACAGTGAAGTGGTACGCATCGAgg                                                                              >  7:198334/1‑136 (MQ=255)
                                                    aCTCTGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTAGCCCGCCAGGGCGCACGGCTGAACCGCGCCCCGCGATGTGAAGTGGTACCCATAGAGcc                                                                             >  8:393554/1‑136 (MQ=255)
                                                    aCTCTGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTAGCCCACCAGGGCGAACGGCAGACCCCCGACCCGCACAGTGAATTGGTACCCAtacatcg                                                                             >  4:54489/1‑131 (MQ=255)
                                                      tctGATTGCTAGTTGGACACGGGCGCCTGGGTACGAAGACCTGGCGGCGGACTTCGGCAGCCTCGTCGCGGTGTTCGCCCTCCAGGGCTAACGGCTGACCCTCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTg                                                                           <  8:346145/137‑1 (MQ=255)
                                                      tctGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCTGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTg                                                                           <  6:445446/137‑1 (MQ=255)
                                                      tctGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCGCCAGGGCGAACGGCTGACCCCCGACCCGCTCAGTGAACTGGTACGCATCCAGCggg                                                                           >  6:41635/1‑135 (MQ=255)
                                                      tctGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCAACAGGGCGAACGGCTGACCCGCGCCCCCCTCAGTGAAGTGGTACGCAACCAGCGTg                                                                           >  8:199625/1‑137 (MQ=255)
                                                      tctGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTAGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTg                                                                           >  4:171292/1‑137 (MQ=255)
                                                      tctGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTAGCCCGCCAGGGCGAACGGCTGACCCGCGCCCCGCGCAGTGAATTGGTTCGCAACGAGCGTg                                                                           >  2:166246/1‑137 (MQ=255)
                                                        tGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGCCCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGAc                                                                         >  2:326519/1‑137 (MQ=255)
                                                        tGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGAc                                                                         <  6:214440/137‑1 (MQ=255)
                                                        tGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGAc                                                                         >  3:123046/1‑137 (MQ=255)
                                                          aTGGCGAGTTCGACACTCGCGCCGTGTTACGAACACCTGGCGGCTGACTGCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACgg                                                                       <  2:91516/137‑1 (MQ=255)
                                                           tGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCTGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACggg                                                                      <  4:104908/137‑1 (MQ=255)
                                                           tGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACggg                                                                      <  5:386760/137‑1 (MQ=255)
                                                           tGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCGCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACCCATCGAGCGTGACggg                                                                      >  4:307135/1‑137 (MQ=255)
                                                           gggCGAGTTGGACACTGGCGCCGGTGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCTCCGGGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACggg                                                                      <  4:46334/136‑1 (MQ=255)
                                                             gCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTAGCCCTCCAGGGCGCACGGCGGACCCCCGACCCCCTCAGGGAAGTGGTTCGCCTAGATCGTGACCGGAt                                                                    >  2:114645/1‑137 (MQ=255)
                                                                aGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCaa                                                                 >  7:246665/1‑137 (MQ=255)
                                                                 gTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGTTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAac                                                                <  2:156897/137‑1 (MQ=255)
                                                                 gTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACggg                                                                      >  5:165489/1‑131 (MQ=255)
                                                                 gTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACggg                                                                      <  6:165489/131‑1 (MQ=255)
                                                                  ttGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAact                                                               <  6:7062/137‑1 (MQ=255)
                                                                  ttGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAact                                                               <  1:251120/137‑1 (MQ=255)
                                                                   tGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTTGCCCTCCAGGGCGCACGGCTGACCCGCGCCCCGCTCAGTGAAGTGGTTAGCATCGAGGGTGTAGGGATCAactt                                                              >  3:221726/1‑136 (MQ=255)
                                                                   tGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTAGCCCTCCAGGGCGAACCGCTGACCCGCGCCCCCCGCAGGGAAGTGGTTTTGATCGAGCGGGGCGGGATCAacga                                                              >  5:302687/1‑135 (MQ=255)
                                                                       cacTGGCGCCGGGGTCCGAACACCTGGCGGCGGACTTCGGCATCCTCGACGCGGTGTTCGGCCTCAAGGGCGAACGTCTGACCCGCGACCGGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACtactac                                                          <  4:129986/137‑1 (MQ=255)
                                                                       cacTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCTTGAAGGGATCAACtactac                                                          <  7:319665/137‑1 (MQ=255)
                                                                       cacTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACtactac                                                          <  4:123046/137‑1 (MQ=255)
                                                                       cacTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACtactac                                                          <  7:461604/137‑1 (MQ=255)
                                                                       cacTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACtactac                                                          <  3:70973/137‑1 (MQ=255)
                                                                       cacTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACtactac                                                          <  8:246665/137‑1 (MQ=255)
                                                                       cacTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTGCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACtactac                                                          <  1:114645/137‑1 (MQ=255)
                                                                       aacTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACtactac                                                          <  3:15962/136‑1 (MQ=255)
                                                                          tGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACTACTACGTc                                                       <  5:421249/137‑1 (MQ=255)
                                                                             cgcCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTAGCCCTCCAGGGCGAACGGCTGACCCGCGCCCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATGAACTACTACGTCAAg                                                    >  5:201691/1‑137 (MQ=255)
                                                                             cgcCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTAGCCCGCCAGGGCGCACCGCGGCCCCCCGACCCGCGCAGTGAAGTGGTAAGCATCGCGCGGGTCGGGATCAACTACTACCTCaaa                                                    >  2:460043/1‑136 (MQ=255)
                                                                              gcCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACTACTACGTCAAgc                                                   <  3:156683/137‑1 (MQ=255)
                                                                               ccGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTAGCCCTACAGGGCGAAAGGCTGACCCGCGCCCCGCGCAGGGAAGTGGTACGCATCGCGCGTGGCCGGCTCAACTACTAAAGCAAgcg                                                  >  4:386336/1‑137 (MQ=255)
                                                                                  gggTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACTACTACGTCAAGCGCTa                                               <  8:265825/137‑1 (MQ=255)
                                                                                            acCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACTACTACGTCAAGCGCTACACCGGGGcc                                     <  4:164156/137‑1 (MQ=255)
                                                                                               tGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACTACTACGTCAAGCGCTACACCGGGGCCGGc                                  <  4:184402/137‑1 (MQ=255)
                                                                                                ggcggcGGACTTCGGCAGCCTCGACGCGGTGTTAGGCCTCCACGGCGAACGGCTGCCCCCCGCCCCGCGCACTGAAGGTGTTCGCATCGAGCGTGGCGGGGTCAACTAAAACGTCAAGAGCTACACCGGGggcggcc                                 >  7:436652/1‑136 (MQ=255)
                                                                                                   ggcggACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCTAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACTACTACGTCAAGCGCTACACCGGGGCCGGCAAGc                              <  7:324120/137‑1 (MQ=255)
                                                                                                    gcggACTTCGGCAGCCTCGACGCGGTGGTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACTACTACGTCAAGCGCTACACCGGGGCCGGCAAGca                             <  1:272534/137‑1 (MQ=255)
                                                                                                     cggACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACTACTACGTCAAGCGCTACACCGGGGCCGGCAAGcac                            <  6:168727/137‑1 (MQ=255)
                                                                                                     cggACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACTACTACGTCAAGCGCTACACCGGGGCCGGCAAGcac                            <  4:220555/137‑1 (MQ=255)
                                                                                                          ttCGGCAGCCTCGACGCGGTGTTAGCCCTCCAGGGCGAACGGCTGACCCGCGCCCCGCGCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACTACTACGTCAAGCGCTACACCGGGGCCGGCAAGCACCTgcg                       >  8:220326/1‑137 (MQ=255)
                                                                                                                    tCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACTACTACGTCAAGCGCTACACCGGGGCCGGCAAGCACATGCGCCGGTACCTg             <  3:252742/137‑1 (MQ=255)
                                                                                                                          gggTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACTACTACGTCAAGCGCTACACCGGGGCCGGCAAGCACATGCGCCGGTACCTGGggcgg       <  1:460043/136‑1 (MQ=255)
                                                                                                                          gggTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACTACTACGTCAAGCGCTACACCGGGGCCGGCAAGCACATGCGCCGGTACCTGGggcgg       <  6:90170/136‑1 (MQ=255)
                                                                                                                          cgGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACTACTACGTCAAGCGCTACACCGGGGCCGGCAAGCACATGCGCCGGTACCTGGggcgg       <  3:94118/137‑1 (MQ=255)
                                                                                                                          cgGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACTACTACGTCAAGCGCTACACCGGGGCCGGCAAGCACATGCGCCGGTACCTGGggcgg       <  1:247705/137‑1 (MQ=255)
                                                                                                                          cgGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACTACTACGTCAAGCGCTACACCGGGGCCGGCAAGCACATGCGCCGGTACCTGGggcgg       <  3:54489/137‑1 (MQ=255)
                                                                                                                          cgGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACTACTACGTCAAGCGCTACACCGGGGCCGGCAAGCACATGCGCCGGTACCTGGggcgg       <  8:324711/137‑1 (MQ=255)
                                                                                                                          cgGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACTACTACGTCAAGCGCTACACCGGGGCCGGCAAGCACATGCGCCGGTACCTGGggcgg       <  3:364022/137‑1 (MQ=255)
                                                                                                                               ttCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACTACTACGTCAAGCGCTACACCGGGGCCGGCAAGCACATGCGCCGGTACCTGGGGCGGCCACg  <  3:211040/137‑1 (MQ=255)
                                                                                                                                 |                                                                                                                                      
TGGAGCGCAAGGCCCAGAAACTCTACGATCGCAAGCAACGCTATGGGGATGCACTCTGATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCGACCCGCTCAGTGAAGTGGTACGCATCGAGCGTGACGGGATCAACTACTACGTCAAGCGCTACACCGGGGCCGGCAAGCACATGCGCCGGTACCTGGGGCGGCCACG  >  KT2440/411210‑411473

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑