Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	KT2440	916,696	0	T	G	33.3%	76.0 / 11.6	63	Q516P (CAG→CCG)	ltxB	Leukotoxin export ATP‑binding protein LtxB
Reads supporting (aligned to +/- strand):  ref base T (8/34);  new base G (20/1);  total (28/35)
Fisher's exact test for biased strand distribution p-value = 3.98e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

AGGTGGGCCATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAGCCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGCACGCGGGCTTCGCCTTCGGGGTGATCGACCGG  >  KT2440/916567‑916829                                                                                                                                  |                                                                                                                                      tggTGGGCCATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATc                                                                                                                                <  4:2527/136‑1 (MQ=255) aGGTGGGCCATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCCCCAGATCCCTGGCCCCCCCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCAGTTGCGGCCCAGCCCGGCAATGCGCTCGCCCGGCgggcgatc                                                                                                                                >  6:137599/1‑132 (MQ=255) aGGTGGGCCATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGatata                                                                                                                                >  8:82659/1‑136 (MQ=255)    tGGGCCATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCCGGGGGCTATCCac                                                                                                                             >  5:78797/1‑136 (MQ=255)      ggCCATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAGcc                                                                                                                           <  5:297965/137‑1 (MQ=255)      ggCCATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAGcc                                                                                                                           <  3:278081/137‑1 (MQ=255)        ccATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAGCCgg                                                                                                                         <  5:158771/137‑1 (MQ=255)        ccATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAGCCgg                                                                                                                         <  7:219790/137‑1 (MQ=255)        ccATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAGCCgg                                                                                                                         <  5:460536/137‑1 (MQ=255)        ccATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAGCCgg                                                                                                                         <  8:27355/137‑1 (MQ=255)         cATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCGGGGTATCCAGCCGGc                                                                                                                        >  8:141089/1‑137 (MQ=255)         cATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCGGGATATCCAGCCGGc                                                                                                                        >  8:460725/1‑137 (MQ=255)          aTGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCGCGGGGGGGGTTACAGCCGGcc                                                                                                                       >  6:306946/1‑137 (MQ=255)           tGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACAAGCTCCATGCCCCCACCCAGCGCCTCCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCGCCGGGGGCTATACAGACGGccc                                                                                                                      >  6:60122/1‑136 (MQ=255)             gCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAGCCGGCCAAt                                                                                                                    <  5:382083/137‑1 (MQ=255)             gCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAGCCGGCCAAt                                                                                                                    <  7:416563/137‑1 (MQ=255)               gATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCCGCGGGATATACAGCCCGCCAATGt                                                                                                                  >  6:205307/1‑137 (MQ=255)                  gCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCTTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAGCCGGCCAATGTTCa                                                                                                               <  3:22613/137‑1 (MQ=255)                   ccGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCCGCTGGATATCCAGCCGGCCCATGTTAAg                                                                                                              >  7:263836/1‑137 (MQ=255)                    cGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCGCGGCGGGGTATAAAGCCGGCCAAAGTTGAGc                                                                                                             >  1:298412/1‑137 (MQ=255)                    cGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCGCGGCGGGATATCCAGCCGGCCAATTGTCAGc                                                                                                             >  6:280520/1‑137 (MQ=255)                    cGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCCGCTGGATATACAGCCGGCCAAAGTTCAGc                                                                                                             >  4:49818/1‑137 (MQ=255)                     gTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCCGCTGGATATCCAGCCGGCCCATGTTCAGCa                                                                                                            >  6:196569/1‑137 (MQ=255)                     gTCCAGGCTGATCTCGCCATGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCGCGCCCGGCTGGATATCCAGCCGGCCAATGTTCAGCa                                                                                                            <  5:250837/137‑1 (MQ=255)                         aGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGGGGGGTGTCCAGCCGGCCCATGTTGAGCACggg                                                                                                        >  4:138104/1‑137 (MQ=255)                          ggCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAGCCGGCCAATGTTCAGCACTGGc                                                                                                       <  3:138104/137‑1 (MQ=255)                           gCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGACGGCGCCGTTGCGGCCCAGCACGGCAATGAGCTCGCACCGGTGGATATACAGCCAGCGAATGTTCAGCTCTGGCg                                                                                                      >  8:440275/1‑137 (MQ=255)                                 ctcGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAGCCGGCCAATGTTCAGCACTGGCGGGTAGt                                                                                                <  7:408395/137‑1 (MQ=255)                                 ctcGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAGCCGGCCAATGTTCAGCACTGGCGGGTAGt                                                                                                <  7:432770/137‑1 (MQ=255)                                 ctcGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAGCCGGCCAATGTTCAGCACTGGCGGGTAGt                                                                                                <  6:172932/137‑1 (MQ=255)                                  tcGCCCTGCACCTGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCGGGATATACAGCCGGCCAATGTTAAGCACTGGCGGGGAGtt                                                                                               >  6:442497/1‑136 (MQ=255)                                  tcGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCGGGCTATACCGCCCGCCCAAGTTCCGCCCTGGCCggtggtg                                                                                               >  2:423858/1‑136 (MQ=255)                                  tcGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCGGGATATACACCCCGCCAATGTTCAGCACGGGCGGGGAGtg                                                                                               >  5:357828/1‑136 (MQ=255)                                   cGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCGCGGCTGGGGTTACAACCGGCCAAAGTTGAGGACTGGCGGGTTGtgt                                                                                              >  5:399035/1‑135 (MQ=255)                                   cGCCCTGCACCAGATCCATGCCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCGCGGCGGGGTATGCAGCCGGCCAGAGTTCCGCACGGGGGGGGAGGCt                                                                                              >  6:164862/1‑137 (MQ=255)                                    gCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAGCCGGCCAATGTTCAGCACTGGCGGGTAGTCtt                                                                                             <  2:5575/137‑1 (MQ=255)                                            ccAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCGCGGCGGGCTATACAGCCGGCCCATGTTAAGCAAGGGCGGGTAGTGTTAGCGGttg                                                                                     >  5:292911/1‑135 (MQ=255)                                                aTCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAGCCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGa                                                                                 <  5:411744/137‑1 (MQ=255)                                                    aTGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAGCCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGtt                                                                             <  5:280520/137‑1 (MQ=255)                                                     tGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAGCCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTg                                                                            <  8:320793/137‑1 (MQ=255)                                                       gCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATACAGCCGGCCAATGTTCAGCCCTGGCGGGTTGTCTTCGCTGTAGCGGAAGTTggg                                                                          >  6:448081/1‑136 (MQ=255)                                                         cccacccaGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAGCCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCt                                                                        <  4:376197/137‑1 (MQ=255)                                                           cacccaGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAGCCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTgg                                                                      <  6:236033/137‑1 (MQ=255)                                                              ccaGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCCGCGGGCTATGCACCCGGCCCATGTTCGGCACGGGCGGGTAGTCGTCGGTGTTGCGGACGGTTGCCGGgcgg                                                                   >  8:412914/1‑136 (MQ=255)                                                               caGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAGCCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCa                                                                  <  6:131316/137‑1 (MQ=255)                                                                aGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCGGGATATCAAGCCGGCCCAAGTTGAGCACAGGCGGGGTTTCTTAGGTGTTGCGGTCGTTGGCCTGGCGCac                                                                 >  4:6715/1‑136 (MQ=255)                                                                    ccTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCCGCTGGTAATCAAGCCCGCCAATGTTGAGCCCGTGCGGGGAGTGTTCGCGGTTGCGGCTGTTGGCCTGGCGCAGGCgg                                                             >  6:312458/1‑137 (MQ=255)                                                                     cTGCATCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCGGGATAAACAACCCGCCAAAGTTGATCACAGGCGGGGTGTCTTATGTTTTTCGGTATTTGTCCTAGAGCAGGCGGt                                                            >  4:351102/1‑137 (MQ=255)                                                                     cTGCAGCAAGGTTGATATGCCGGCGCCGTTGCGGCCCAGCACGGCAATCCGCTCGCCCCGCGGGCTATCCCCCCGGCCAATGTTCAGCACAGGCGGGTAGTAGACGCTGTAGCGGCACTTGTCCTGGCGCAGGCGGt                                                            >  8:369827/1‑137 (MQ=255)                                                                          gcaAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCGGGTTATACAGCCGGCCCAAGTTGAGCCCGGGCGGGGAGTCTTCGCGGTAGCGGAAGTTGGCCGGGCGCCGGGGGTGCTCg                                                       >  7:230767/1‑137 (MQ=255)                                                                              ggTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCCGCCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGt                                                   <  3:113617/137‑1 (MQ=255)                                                                                      tGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCGCGGCGGGGTATACCGCCGGCCAATGTTGAGGACGGGGGGGGAGTGTTGGGGGGTGCGGAAGTTGGCCGGGCGCAGGCGGTAATCGCCGGGAATGGcc                                           >  4:11173/1‑137 (MQ=255)                                                                                      ggCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCGCACCCGGCGGGATATCCCGCCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGcc                                           <  3:210374/136‑1 (MQ=255)                                                                                               ggTTGCGGCCCAGCAGTGCTATGCGCTCGCCCGGGTGGATATCCAGCCGGGCTATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGc                                  <  3:25301/136‑1 (MQ=255)                                                                                               ggTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTTGATATCCAGCCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGc                                  <  6:434899/136‑1 (MQ=255)                                                                                                      gtccAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAGCCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGCACGCggg                           <  2:455093/135‑1 (MQ=255)                                                                                                      gCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAGCCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGCACGCggg                           <  6:350081/137‑1 (MQ=255)                                                                                                                          cGCCCGGCTGGATATCCAGCCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGCACGCGGGCTTCGCCTTCGGGGTGATCg       <  7:141089/137‑1 (MQ=255)                                                                                                                               ggCTGGATATGCAGCCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGGTGTAGCGGAAGTTGGCGTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGCCCGCGGGCTTCGCCTTCGGGGTGATCGACCgg  <  7:82659/137‑1 (MQ=255)                                                                                                                               ggCTGGATATCCAGCCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGCACGCGGGCTTCGCCTTCGGGGTGATCGACCgg  <  5:155936/137‑1 (MQ=255)                                                                                                                               ggCTGGATATCCAGCCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGCACGCGGGCTTCGCCTTCGGGGTGATCGACCgg  <  3:6715/137‑1 (MQ=255)                                                                                                                               ggCTGGATATCCAGCCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGCACGCGGGCTTCGCCTTCGGGGTGATCGACCgg  <  6:357828/137‑1 (MQ=255)                                                                                                                               ggCTGGATATCCAGCCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGCACGCGGGCTTCGCCTTCGGGGTGATCGACCgg  <  5:442497/137‑1 (MQ=255)                                                                                                                               ggCTGGATATCCAGCCGGCCAATGTTCAGCACTGGCGGGGAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGCACGCGGGCTTCGCCTTCGGGGTGATCGACCgg  <  6:292911/137‑1 (MQ=255)                                                                                                                                  |                                                                                                                                      AGGTGGGCCATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAGCCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGCACGCGGGCTTCGCCTTCGGGGTGATCGACCGG  >  KT2440/916567‑916829

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑