| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | KT2440 | 5,924,085 | Δ6 bp | 5.8% | coding (133‑138/1224 nt) | ubiI ← | 2‑octaprenylphenol hydroxylase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | KT2440 | = 5924084 | 51 (1.200) | 3 (0.070) | 3/226 | NT | 5.8% | coding (139/1224 nt) | ubiI | 2‑octaprenylphenol hydroxylase |
| ? | KT2440 | 5924091 = | 49 (1.200) | coding (132/1224 nt) | ubiI | 2‑octaprenylphenol hydroxylase | |||||
GGTGCCGCTGCCATCCCACACATGCATGTCGGAATACGGCGTGGCGCGCCGCTGGGCAATGCCGTCCCAGGCGCCAAGGCGCTCGAGGATGCGCTGGCTGGCCGCCGATAGCGCGCTGACACGCGGCTCGAACGGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > KT2440/5923947‑5924084‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcATCGAAGGGTACGACCGTCAGCGGGCCACCATCGAGCAACAAAATTTGCAGGCCACTGTGGCGCAACGCCAAGGCCAGGGCGCTGCCCACCATACCGGCACCGACAATCAACAGATCTGCGCGCATTTCCATG > KT2440/5924091‑5924223 GGTGCCGCTGCCATCCCACACATGCATGTCGGAATACGGCGTGGCGCGCCGCTGGGCAATGCCGTCCCAGGCGCCAAGGCGCTCGAGGATGCGCTGGCTGGCCGCCGATAGCGCGCTGACACGCGGCTCGAACGG > 1:27478/1‑135GGTGCCGCTGCCATCCCACACATGCATGTCGGAATACGGCGTGGCGCGCCGCTGGGCAATGCCGTCCCAGGCGCCAAGGCGCTCGAGGATGCGCTGGCTGGCCGCCGATAGCGCGCTGACACGCGGCTCGAACGG > 8:43342/1‑135 ATGCATGTCGGAATACGGCGTGGCGCGCCGCTGGGCAATGCCGTCCCAGGCGCCAAGGCGCTCGAGGATGCGCTGGCTGGCCGCCGATAGCGCGCTGACACGCGGCTCGAACGGGGCATCGAAGGGTACGACCGT < 5:89133/135‑1 GCGCCGCTGGGCAATGCCGTCCCAGGCGCCAAGGCGCTCGAGGATGCGCTGGCTGGCCGCCGATAGCGCGCTGACACGCGGCTCGAACGGGGCATCGAAGGGTACGACCGTCAGCGGGCCACCATCGAGCAACA > 4:231696/1‑134 AGGATGCGCTGGCTGGCCGCCGATAGCGCGCTGACACGCGGCTCGAACGGGGCATCGAAGGGTACGACCGTCAGCGGGCCACCATCGAGCAACAAAATTTGCAGGCCACTGTGGCGCAACGCCAAGGCCAGGGCG < 3:231696/135‑1 GCATCGAAGGGTACGACCGTCAGCGGGCCACCATCGAGCAACAAAATTTGCAGGCCACTGTGGCGCAACGCCAAGGCCAGGGCGCTGCCCACCATACCGGCACCGACAATCAACAGATCTGCGCGCATTTCCATG < 8:34402/135‑1 GGTGCCGCTGCCATCCCACACATGCATGTCGGAATACGGCGTGGCGCGCCGCTGGGCAATGCCGTCCCAGGCGCCAAGGCGCTCGAGGATGCGCTGGCTGGCCGCCGATAGCGCGCTGACACGCGGCTCGAACGGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > KT2440/5923947‑5924084‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcATCGAAGGGTACGACCGTCAGCGGGCCACCATCGAGCAACAAAATTTGCAGGCCACTGTGGCGCAACGCCAAGGCCAGGGCGCTGCCCACCATACCGGCACCGACAATCAACAGATCTGCGCGCATTTCCATG > KT2440/5924091‑5924223 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |