| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 982,565 | T→A | intergenic (‑127/+476) | ompF ← / ← asnS | outer membrane porin 1a (Ia;b;F)/asparaginyl tRNA synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 982,565 | 0 | T | A | 98.4% | 204.5 / NA | 65 | intergenic (‑127/+476) | ompF/asnS | outer membrane porin 1a (Ia;b;F)/asparaginyl tRNA synthetase |
| Reads supporting (aligned to +/- strand): ref base T (1/0); major base A (36/27); minor base G (1/0); total (38/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTT‑TTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATAGAGACGTGATGATATTTACAGCA > CP009273/982421‑982708 | aaTATTGCGCTTCATCATTATTTATTACCCTCATGGTTTT‑TTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACaaa < 2:881915/149‑1 (MQ=255) atatTGCGCTTCATCATTATTTATTACCCTCATGGTTTT‑TTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAAc < 1:953153/149‑1 (MQ=255) gcgcTTCATCATTATTTATTACCCTCATGGTTTT‑TTTTATGTCACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCCTCTTTCCGTACAAACTAAct > 2:753010/1‑148 (MQ=255) cgcTTCATCATTATTTATTACCCTCATGGTTTT‑TTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAAcct > 2:620790/1‑147 (MQ=255) cgcTTCATCATTATTTATTACCCTCATGGTTTT‑TTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGt < 1:238833/149‑1 (MQ=255) cTTCATCATTATTTATTTCCCTCATGGTTTT‑TTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGttt < 1:252784/149‑1 (MQ=255) cTTCATCATTATTTATTACCTTCATGGTTTT‑TTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGttt < 1:1036085/149‑1 (MQ=255) cTTCATCATTATTTATTACCCTCATGGTTTT‑TTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGttt < 1:468014/149‑1 (MQ=255) ttCATCATTATTTATTACCCTCATGGTTTT‑TTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCACTACGAATTTAGTGGAGTATTGTTGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATTCATACTAACGTTTc > 2:369088/1‑149 (MQ=255) catcatTATTTATTACCCTCATGGTTTT‑TTTTATTATACCTGCCACTGCCGTCAATAAGATCTGTCAATAAAGATTTACGGAACTATTGATGAGGGTTTGGTGTCTTTATGTGTCTTCTTGCATCTTTCCATATAAACTATTGTTTctc > 2:1099016/1‑147 (MQ=255) tcatTATTTATTACCCTCATGGTTTT‑TTTTATGACACCTGCAACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTa > 1:1043650/1‑149 (MQ=255) tatttattACCCTCATGGTTTT‑TTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGCCCGTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGt < 1:1367219/149‑1 (MQ=255) cccctctGGTTTTCTTTTATGACACCCGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGc < 1:470854/143‑1 (MQ=255) cccTCATGGTTTT‑TTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCt < 1:1213082/149‑1 (MQ=255) cTCATGGTTTT‑TTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCATTAGTTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTAc > 1:1057775/1‑149 (MQ=255) tCATGGTTTT‑TTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACa > 1:719247/1‑149 (MQ=255) cttGGTTTT‑TTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACaa < 2:216341/147‑1 (MQ=255) gTTTT‑TTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACaaagat > 1:129953/1‑149 (MQ=255) tGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTgg > 2:1045613/1‑149 (MQ=255) cTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCaa > 1:1369306/1‑149 (MQ=255) gCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCaaaa > 1:794183/1‑149 (MQ=255) gCCACTGCCGTCAATAAGTTCTGTCAAAAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCAACAGGCAGCTTTCCACACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCaaaa < 1:566273/149‑1 (MQ=255) gCCACCGCCGCCAATAATTTCTGTCAATAACAATTTCCGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAAGCATCTTTCCAGACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCaaaa < 1:798711/149‑1 (MQ=255) gTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAAAGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAat > 2:961079/1‑149 (MQ=255) aTAAGTTCTGTCAATAAAACTTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATAAGt > 2:279085/1‑149 (MQ=255) tAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTa > 1:222722/1‑149 (MQ=255) ttCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCa > 2:651692/1‑149 (MQ=255) aatCAATAAAAACTTACGGAACAAATAAAAAAAAATAAGTTTCTTTACCTAACAGCAGGCAGATTTCCACACACACTAACCTTTCGCCACCGTAAAAGTGCTACAACGATAAAGATTTGAAAAAAAAAAAAAAAAATATGTAACCaaaa < 2:1265641/147‑1 (MQ=255) gTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACTAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAg > 1:556746/1‑149 (MQ=255) tgaaaaTGTACGGAGCTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTaaaa < 1:871636/147‑1 (MQ=255) aaaaTTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACaaagataaagat < 2:413282/108‑1 (MQ=255) aaaaTTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACaaagataaagat > 1:413282/1‑108 (MQ=255) aTTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTaa < 1:1099016/149‑1 (MQ=255) ggAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACt < 1:269444/149‑1 (MQ=255) ggAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACAGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAACTAACATTTAAGGAACt > 2:400859/1‑149 (MQ=255) aaCTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACttt > 2:1200160/1‑149 (MQ=255) aaCTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACttt > 1:880631/1‑149 (MQ=255) cTATTGAGGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCCACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTtgt < 1:966747/149‑1 (MQ=255) aTTGATGAGAGTTTGGTGTCTTTATGTGTCTCCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGACAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGa < 1:976199/149‑1 (MQ=255) ttGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATGCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGaa > 2:1086232/1‑149 (MQ=255) ttGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGaa < 2:794183/149‑1 (MQ=255) tgatgaGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAac < 1:51166/149‑1 (MQ=255) tgaGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAATTTTGTGAACAcc > 2:439336/1‑149 (MQ=255) gagTCTGCTGTCTTTATGTGTCTGCGGGCATCTTTCCATACAAACTAGCGTTTCGCGACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTc < 2:183080/149‑1 (MQ=255) tttGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCata > 1:1271078/1‑149 (MQ=255) tttCGTGTCTTTATGTGTTTGCAGGCATCTTTCCATACAAACGAACGTTTCGCTACCGTGAAAGTGCTACAAAGACAAAGATGTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTTAGGAACTTTGTGAACACCGTCata < 1:724949/149‑1 (MQ=255) tgtCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTcc > 1:1112241/1‑149 (MQ=255) gtCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCa > 2:401754/1‑149 (MQ=255) gtCTTTAGGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCa < 2:860119/149‑1 (MQ=255) tCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACCAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCACAGTTCAAt > 2:1351749/1‑149 (MQ=255) tCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCAt > 1:300553/1‑149 (MQ=255) tCTTTATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCAt > 1:1224218/1‑149 (MQ=255) tttATGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTAATATTTCCATag > 1:775912/1‑149 (MQ=255) tATGTGTCTGCAGGCATCTTTCCATACAAACTAACGCTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATagag > 1:297255/1‑149 (MQ=255) aTGTGTCTGCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATAgaga > 2:1342333/1‑149 (MQ=255) aTGTGTCTGCAGGCATCTTTCCATACAAACTAACGCTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATAgaga < 2:297255/149‑1 (MQ=255) tgtgTCTGCAGGCATCTTTCCATACAAACTAACGTCTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATAGAGAc > 2:876990/1‑149 (MQ=255) gcctgccgacttCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATAGAGACGtg > 2:382459/12‑149 (MQ=255) gCAGGCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATAGAGACGtgatga < 1:620790/149‑1 (MQ=255) gCATCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATAGAGACGTGATGATAtt > 2:503681/1‑149 (MQ=255) gCATCCTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATAGAGACGTGATGATAtt < 2:1356567/149‑1 (MQ=255) aTCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATAGAGACGTGATGATATTTa > 2:348104/1‑149 (MQ=255) tCTTTCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATAGAGAGGTGGTGATATTTAc > 1:54596/1‑149 (MQ=255) ttCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATAGAGACGTGATGATATTTACAGc > 2:81521/1‑149 (MQ=255) tCCATACAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAAAACCGTCATATTTACATAGCGACGTGATGATATTTACAGCa > 2:26913/1‑149 (MQ=255) | AATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTT‑TTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAACTATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCCATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATAGAGACGTGATGATATTTACAGCA > CP009273/982421‑982708 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |