New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP009273 | 910032 = | 63 (1.170) | 3 (0.060) | 3/278 | 8.0 | 4.9% | coding (282/900 nt) | ybjE | putative transporter |
? | CP009273 | 910077 = | 56 (1.080) | coding (237/900 nt) | ybjE | putative transporter | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
AAATTAACGTGTATTCACTGGCTTCGGTCGCGTGTTGTAAGAAAGCCAGTCCACTTAGACCAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAATATTACACAGTAAAATAACGGTAATACTGACGGCAGAATAATGCAGAATCGCCAACAGGTTACTGGCGAGGTTATCGAGAAACGCCAGA > CP009273/909890‑910173 | aaaTTAACGTGTATTCACTGGCTTCGGTCGCGTGTTGTAAGAAAGCCAGTCCACTTAGACCAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGAtgg < 1:378774/149‑1 (MQ=255) tAACGGGTATTCACTGGCCTCGGTCGCGTGTTGTAAGAAAGCCAGTCCACTTAGACCAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGAt < 2:695294/143‑1 (MQ=255) aaCGTGTATTCACTGGCTTCGGTCGCGTGTTGTAAGAAAGCCAGTCCACTTAGACCAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGtt < 1:903844/149‑1 (MQ=255) aaCGTGTAGTCACTGGCTTCGGGCGCGTGTTGTAAGAAAGCCAGTCCACTTAGACCAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGAtg < 2:318594/143‑1 (MQ=255) cgcgtATTCACTGGCTTCGGTCGCGTGTTGTAAGAAAGCCAGTCCACTTAGACCAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTgc < 1:512966/146‑1 (MQ=255) tCACTGGCTTCGGTCGCGTGTTGTAAGAAAGCCAGTCCACTTAGACCAATGGCCAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGCGTTCTTCTTGCTGATGGTGGTTGCGCCCCgg > 1:522926/1‑149 (MQ=255) cccTGGCTTCGGTCGCGTGTTGTAAGAAAGCCAGTCCACTTACACCAATGGCGGAGCCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTgcgc < 2:748850/141‑1 (MQ=255) cTGGCTTCGGTTGCGTGTTGTAAGAAAGCCCGTCCACTTAGACCAATGGCAAAACCAATCACGACTACGCCGCACAGCTTTTGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCa < 2:678949/143‑1 (MQ=255) cGGTCGCGTGTTGTAAGAAAGCCAGTCCACTTAGACCAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAgg > 2:640684/1‑143 (MQ=255) cgTGTTGTGAGAAAGCCAGTCCACTTAGACCAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGCGTTTTTCTTGCTGATGGTGGTTGCGCCGCGGCAggggtccc > 2:732374/1‑137 (MQ=255) cgTGTTGTAAGTAAGCCAGTCCACTTAGACCATTGGCAAAACCAATCACTACTACACCGCCCCGTTTTTGCGGCTCCAGCGCCGTCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCTACGGCAGGCCTCGc < 2:140220/143‑1 (MQ=255) cgTGTTGTAAGAAAGCCAGTCCACTTAGACCAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGc < 1:434033/149‑1 (MQ=255) tgttgtAAGAAAGCCAGTCCACTTAGACCAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTc > 2:719847/1‑143 (MQ=255) ttgtAAGAAAGCCAGTCCACTTAGACCTAGATCCAGACCTTTCATTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGACTCTTTCTTGATTACGGTCGTTGCGTACCGGCACGTCTCGCtagt < 2:801969/143‑4 (MQ=255) ttgtAAGAAAGCCAGTCCACTTAGACCAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCa > 2:228609/1‑143 (MQ=255) ttgtAAGAAAGCCAGTCCACTTAGACCAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCa > 2:200957/1‑143 (MQ=255) ttgtAAGAAAGCCAGTCCACTTAGACCAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCcaca > 1:651235/1‑149 (MQ=255) ttgtAAGAAAGCCAGTCCACTTAGACCAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGATTTTCTTGCTGATGGGGGTTGCGCCACGGCAGGCCTCGCTCCAGCcaaa > 1:651070/1‑147 (MQ=255) tgtAAGAAAGCCAGTCCACTTAGACCAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGGTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCATCGCTCCAg > 2:462997/1‑143 (MQ=255) gtAAGAAAGCCAGTCCACTTAGACCAATGGCAAAACCAATCACTACTACGCCGCAAAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGGTTTTCTTGCTGATGGGGGTTGCGCCACGGCAGGCCTCGGTCCAGcccaatc > 1:178932/1‑144 (MQ=255) gtAAGAAAGCCAGTCCACTTAGACCAATGGCAAAACCAAGCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGGTTTTCTTGCTGATGGTGGTTGCGCCACGGCCGGCCTCGCCCCAga > 2:690491/1‑142 (MQ=255) aaGAAAGCCAGTCCACTTAGACCAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAg > 1:843731/1‑149 (MQ=255) gAAAGCCAGGCCACTTAGACCAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAggg < 1:154701/149‑1 (MQ=255) aaaGCCAGTCCACTTAGACCAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGGCATCGCAATACGCGCCGGGAGCTTTTCTTGCTAGTGGTGGAGGCGCCACGGCAGGCCTCGCTCCAGCcacct > 2:667686/1‑141 (MQ=255) aaGCCAGTCCACTTAGACCAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGggcg < 1:355929/149‑1 (MQ=255) aGCCAGTCCACTTAGACCAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGggcgg > 1:509313/1‑149 (MQ=255) ccAGTCCACTTAGACCAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTGTTTCTGGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAga > 2:694503/1‑142 (MQ=255) gTCCACTTAGACCAATGGCAAACCCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAata < 1:156783/149‑1 (MQ=255) aCTTAGACCAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCCCCAGCCACATCAGGGCGGCAATATTac > 1:889932/1‑149 (MQ=255) gACCAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCGGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAATATTa < 2:84509/143‑1 (MQ=255) ccAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCCGACACATCAGGGCGGCAATAGTaca < 2:384109/143‑1 (MQ=255) ccAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATGAGGGCGGCAATATTACACAGTaa < 1:600707/149‑1 (MQ=255) ccAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAATATTaca < 2:317105/143‑1 (MQ=255) gCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCGGGCCTCGCTCCAGCGACCTCAGGGGCGCAATAGTACAAAGTaaaaagcc > 1:394565/1‑145 (MQ=255) aaaaCCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAATATTACACAGTAAAATAACgg > 1:13516/1‑149 (MQ=255) aaaCCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGAAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAATATTACACAGTAAAATAACGGt > 1:867013/1‑149 (MQ=255) aaCCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACTCGACGCGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAAGATTACAAAGTAAAATa > 2:764047/1‑143 (MQ=255) actactACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAATATTACACAGTAAAATAACGGTAATACTGAc < 1:261351/149‑1 (MQ=255) cgcACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAATATTACACAGTAAAATAACGGTGATACTGACGGCAGaataa < 1:673026/149‑1 (MQ=255) ttgtggCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAATATTACACAGTAAAATAACGGTAATACTGACGGCAGaataat < 2:494443/138‑1 (MQ=255) tttAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGATGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAATATTACACAGTAAAAAAACTGTAATACTGACGGCAGAATAATGCAGaaa > 1:114810/1‑148 (MQ=255) ttAGCGCCTCCCGCGCCATCGCAATTCGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAATATTACACAGTAAAATAACGGTAATACTGACGGCAGAATAATGc < 2:394462/143‑1 (MQ=255) ttgCGACTCCAGCGGCATCGCATGACGCGTCGGGAGTTTTGCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAATATTACACAGTAAAATAACGGTAATACTGACGGCAGAATAATGCa < 2:363034/141‑1 (MQ=255) ggCGACTCCAGCGCCACCGCAATACGCGACGGGAGGTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCGCCAGCCACATCAGGGCGGCAATATTACACAGTAAAATAACGGTAATACTGACGGCAGAATAATGCAGAATCGc < 1:443365/148‑1 (MQ=255) aGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAATATTACACAGTAAAATAACGGTAATACTGACGGCAGAATAATGCAGAATCGc < 1:679914/149‑1 (MQ=255) cGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAATATTACACAGTAAAATAACGGTAATACTGACGGCAGAATAATGCAGaa > 2:596631/1‑143 (MQ=255) cTCCAGCGCCCTCGCAACACGCGACGGGAGTTTCTCGTGCTGATGGTGGTTGCGCCCCGGCAGGCCTCGCCCCAGCCACATCAGGGCGGAAATAGTCCACAGTAAAATAACGGTAATACTGACGGCAGAATAATGCAGAATCGCCAACa < 1:252228/149‑1 (MQ=255) cAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAATATTACACAGTAAAATAACGGTAATACTGACGGCAGAATAATGCAGAATCGCCa > 2:382410/1‑143 (MQ=255) aGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAATATTACACAGTAAAATAACGGTAATACTGACGGCAGAATAATGCAGAATCGCCaa < 2:11722/143‑1 (MQ=255) aTCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAATATTACACAGTAAAATAACGGTAATACTGACGGCAGAATAATGCAGAATCGCCAACAGGTTACTGGc > 1:48504/1‑149 (MQ=255) cGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAATATTACACAGTAAAATAACGGTAATACTGACGGCAGAATAATGCAGAATCGCCAACAGGTTAc > 2:795505/1‑143 (MQ=255) aaTACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCACCAGCCACATCAGGGCGGCAATATTACACAGTAAAATAACGGTAATACTGACGGCAGAATAATGCAGAATCGACAACAGGTTACAgg > 2:530846/1‑143 (MQ=255) aCGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAATATTACACAGTAAAATAACGGTAATACTGACGGCAGAATAATGCAGAATCGCCAACAGGTTACTGGCGAGGTTAt < 1:853418/149‑1 (MQ=255) cgcgACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAATATTACACAGTAAAATAACGGTAATACTGACGGCAGAATAATGCAGAATCGCCAACAGGTTACTGGCGAg < 2:443307/143‑1 (MQ=255) cgACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAATATTACACAGTAAAATAACGGTAATACTGACGGCAGAATAATGCAGAATCGCCAACAGGTTACTGGCGAGGTTATCga < 1:880373/149‑1 (MQ=255) cGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAATATTACACAGTAAAATAACGGTAATACTGACGGCAGAATAATGCAGAATCGCCAACAGGTTACTGGCGAGGTTATCGAGaa > 1:391648/1‑149 (MQ=255) gggAGTTTTTCTTTCTGAGGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACACCAGGGCGGCAATCTTACACATTAAAATAACGGTAATACTGACGGCAGAATAATGCAGAATCGCCAACAGGTTACTGGCGAGGTTATc < 2:22662/143‑1 (MQ=255) gAGTTTTTGTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAATATTACACAGTAAAATAACGGTAATACTGACGGCAGAATAATGCAGAATCGCCAACAGGTTACTGGCGAGGTTATCga < 2:265271/143‑1 (MQ=255) tttttCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAATATTACACAGTAAAATAACGGTAATACTGACGGCAGAATAATGCAGAATCGCCAACATGTTACTGGCGAGGTTATCGAGAAACGCCa < 1:561499/149‑1 (MQ=255) tttCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCATTATTGCACAGTAAAATAACGGTAATACTGACGGCAGAATAATGCAGAATCGCCAACAGGTTACTGGCGAGGTTATCGAGAAAAGCCAGa > 1:138629/1‑149 (MQ=255) tttCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAATATTACACAGTAAAATAACGGTAATACTGACGGCAGAATAATGCAGAATCGCCAACAGGTTACTGGCGGGGTTATCGAGAAACGCCAGa > 1:391931/1‑149 (MQ=255) tttCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAATATTACACAGTAAAATAACGGTAATACTGACGGCAGAATAATGCAGAATCGCCAACAGGTTACTGGCGAGGTTATCGAGAAACGCCAGa < 1:273301/149‑1 (MQ=255) gCTGATGGTGGGTGCGCCACGGCAGGCCCCGCTCCAGCCACATCAGGGCGGGAATATTACTCAGTAAAATAACGGTAATACTGCCGGCAGAATAATGCAGAATCGCCAACAGGTTCCTGGCGAGGTTATCGAGAAACGCCAGa < 2:687035/143‑1 (MQ=255) | AAATTAACGTGTATTCACTGGCTTCGGTCGCGTGTTGTAAGAAAGCCAGTCCACTTAGACCAATGGCAAAACCAATCACTACTACGCCGCACAGTTTTAGCGACTCCAGCGCCATCGCAATACGCGACGGGAGTTTTTCTTGCTGATGGTGGTTGCGCCACGGCAGGCCTCGCTCCAGCCACATCAGGGCGGCAATATTACACAGTAAAATAACGGTAATACTGACGGCAGAATAATGCAGAATCGCCAACAGGTTACTGGCGAGGTTATCGAGAAACGCCAGA > CP009273/909890‑910173 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |