New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 312194NA (NA)9 (0.180) 8/276 NT 11.0% intergenic (+30/+3) insF1/ykgA IS3 transposase B/pseudogene, AraC family;putative regulator; Not classified; putative ARAC‑type regulatory protein
?CP009273 = 642348 73 (1.470)coding (618/879 nt) citG 2‑(5''‑triphosphoribosyl)‑3'‑dephosphocoenzyme‑A synthase

GTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGTGCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCA  >  CP009273/642202‑642496
                                                                                                                                                  |                                                                                                                                                    
gTTCGAATGCCCCCTTTTTTTATTTTTTTTGTCGCGACGCGCGGTAGCCAGCGCAGACCCCCCTCGCCACCGCGCGACGCAACCTCGGCCGCGCCGTTGATCGCCACCCCTCGCAGCAAGGTATCGAGCCATGCCAGTTCAGGATCTaa                                                                                                                                                    >  1:618796/1‑149 (MQ=255)
  tCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTCATCGCCATCAGTAGGAGCAAGGTAACGGGCAATGCCAGTTCAGGATCtggac                                                                                                                                                  >  1:324112/1‑145 (MQ=255)
   cGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTtgatc                                                                                                                                                 >  2:265468‑M2/1‑144 (MQ=255)
    gggggCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAAcccc                                                                                                                                                <  1:431069/145‑1 (MQ=255)
         cccccTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATc                                                                                                                                           <  2:711224/149‑1 (MQ=255)
         cccccTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATc                                                                                                                                           <  2:434419/149‑1 (MQ=255)
           cccTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTtgatcctccccac                                                                                                                                         <  2:549265‑M2/149‑14 (MQ=255)
            ccTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCcag                                                                                                                                        <  2:709004/149‑1 (MQ=255)
             cTTTTTTCTATATTTTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCCGGATCTAACCCCTGCTCcggc                                                                                                                                       >  1:45379/1‑149 (MQ=255)
              tttttGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCcagca                                                                                                                                      <  2:702770/149‑1 (MQ=255)
                  tgcgaaattcaggcgaatgctgtttacggggttttttactggttgatactgtttttgtcctgcgagttacctctgactgagagtttactcacttagccgcgtgtccactcttgctgggtaagatcATCTAACCCCTGAGCCAGccgagc                                                                                                                                  >  2:813259‑M2/126‑148 (MQ=255)
                    cAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGa                                                                                                                                >  2:228041/1‑149 (MQ=255)
                            tttGCGCCTCGCGCTGTAGCCAGCGCAGGCGCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTtgatcctacccacgtaatatggacacaggc                                                                                                                        >  2:825454‑M2/1‑119 (MQ=255)
                            tttGCCCCTCGCGCTGGAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGc                                                                                                                        <  1:469565/149‑1 (MQ=255)
                            tttGCCCCTCGCCCTGTAGCCAGCGCTGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCAAGTTAATGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGc                                                                                                                        <  1:187989/149‑1 (MQ=255)
                             ttGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCg                                                                                                                       >  2:575701/1‑149 (MQ=255)
                              tGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCgg                                                                                                                      <  2:426883/149‑1 (MQ=255)
                               gcgcCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCCTCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGAACTAACCCCTGATCCAGAAGGGTGAGGTAATGCGGc                                                                                                                     >  2:407204/1‑149 (MQ=255)
                                 gcCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGCACGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGAACTAACCCCTGATCCAGCAGGGTGAGGTAATGCGGGaa                                                                                                                   >  1:167277/1‑149 (MQ=255)
                                 gcCTCGCGCTGGAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTATCCCCTGATCCAGCAGAGTGAGGTAATGCGGCaa                                                                                                                   <  2:558700/149‑1 (MQ=255)
                                 cccTCGTGCTGTAGCCAGCGCAGGCCCCCCGCGCCACCGCGCGAGGCAACGGTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGGGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCaa                                                                                                                   <  2:161568/148‑1 (MQ=255)
                                  ccTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATGGTCATGAGTAGGATCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGGAATGCGGCAAg                                                                                                                  >  2:853792/1‑149 (MQ=255)
                                   cTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGAAAGGTATAGAGCAATGCCAGTACAGGATCTAACCCCATATCCAGCAGAGTGAGGTAATGCGGCAAgg                                                                                                                 <  1:725616/149‑1 (MQ=255)
                                    tCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGc                                                                                                                >  1:220899/1‑149 (MQ=255)
                                    gctgtttacggggttttttactggttgatactgtttttgtcatgttagtcacctctgactgagggtttactcacttagccgcgtgtccactattgctgggtaagatcATCTAACCCCTGTTCCAGCAGGGTGAGGGAATGCGGCGAGGc                                                                                                                >  2:408117‑M2/108‑149 (MQ=255)
                                     cgcgCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCg                                                                                                               <  2:509570/149‑1 (MQ=255)
                                      gcgcTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCACGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCCGCAGAGTGAGGGACTGCGGAAAGGCGt                                                                                                              >  1:814278/1‑149 (MQ=255)
                                      gcgcTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATATAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGt                                                                                                              >  2:20567/1‑149 (MQ=255)
                                      gcgcTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGAATCTAACCCCTGATCCAGCAGAGTGAGGGAAGGCGGCAAGGCGt                                                                                                              >  1:814297/1‑149 (MQ=255)
                                        ggcgTAGCCAGCGCAGGCGCCCCTCGTCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGTGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGtga                                                                                                            <  1:370451/146‑1 (MQ=255)
                                        gcTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCCATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGtga                                                                                                            <  2:294040/149‑1 (MQ=255)
                                         cTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGtgat                                                                                                           <  1:773925/149‑1 (MQ=255)
                                              gggttttttactggttgctcctgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactcttgctgggtaagatcATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATc                                                                                                      <  1:316497‑M2/52‑1 (MQ=255)
                                               ccAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGCGCGAGGTAATGCGGCAAGGCGTGGTTGATCa                                                                                                     >  1:709897/1‑149 (MQ=255)
                                                ccgtgcatgcactccTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGGGATGGATCAc                                                                                                    >  1:658778/14‑149 (MQ=255)
                                                cAGCGCATGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGGATCGAGCAATGCCAGTTGAGGATCTAACCCCTGATCCAGCAGAGTGCGGTAATGCGGCAGGGCGcgatggaggac                                                                                                    >  2:140654/1‑145 (MQ=255)
                                                 aGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCAcc                                                                                                   >  2:321784/1‑149 (MQ=255)
                                                   tttgtcttgttgataatgttcttgtcaggtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAg                                                                                                 <  2:666547‑M2/57‑1 (MQ=255)
                                                     cAGGCCCCCCGCGCCACCGGGCGATGCAACGTTGGTATCACCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTg                                                                                               <  1:448185/149‑1 (MQ=255)
                                                       ggCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGa                                                                                             <  1:210677/149‑1 (MQ=255)
                                                       cgCCCCCCCCGCCACCGCCCGAGGCAACGTTGGTATCGCCGTGGATCGCCATCAGTAGGAGCAAGTTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGa                                                                                             <  2:218413/148‑1 (MQ=255)
                                                        gCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCCGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGAt                                                                                            >  1:17838/1‑149 (MQ=255)
                                                         ccccccTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCGCCAATGGATa                                                                                           <  1:228041/149‑1 (MQ=255)
                                                            cccTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCCAAGCGGGATTGAACAAGAGTGGATAAcc                                                                                        >  2:412920/1‑149 (MQ=255)
                                                            cccTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGGGAGGTAATGCGGCAAGGCGTGATTGATCCCCAGTGGATAAcc                                                                                        >  2:376597/1‑149 (MQ=255)
                                                              cTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATGAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGAATGATCACCAGTGGATAACCCg                                                                                      >  2:603317/1‑149 (MQ=255)
                                                              cTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATAAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGACTGATCACCAGTGGCTAACCCg                                                                                      >  2:603468/1‑149 (MQ=255)
                                                                  ccACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTc                                                                                  <  2:479461/149‑1 (MQ=255)
                                                                      cgcgcgATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTtgatcctacccacgtaatatggacacaggcctaagcgaggttcttgttttcaaattgttccggactgaggcc                                                                              >  1:549265‑M2/1‑77 (MQ=255)
                                                                        cgcgATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGCGAGGTAATGCGGCCAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGCCTTc                                                                            >  2:349337/1‑149 (MQ=255)
                                                                         gcgATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCa                                                                           <  1:797652/149‑1 (MQ=255)
                                                                         gcgATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCa                                                                           <  1:59005/149‑1 (MQ=255)
                                                                          cgATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCAc                                                                          <  1:486167/149‑1 (MQ=255)
                                                                               cAACGTTGGTATCGCTGTTGCTCGCCATCAGTAGGAGCAAGGTATCGTGCAATGCCCGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGt                                                                     <  1:696751/149‑1 (MQ=255)
                                                                                 gcatcccctcggagtgagagtgttcgcccttagccgggtgtccacgattgctgggtaagatcATCTAACCCCTGAGCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTTATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGTgc                                                                   <  2:804520‑M2/87‑1 (MQ=255)
                                                                                   gTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTCATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGTgcgc                                                                 >  1:623448/1‑149 (MQ=255)
                                                                                    ttGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTtgatcctacccacgtaatatggacacaggcctaagcgaggttcttgttttcaaattgttccggactgaggccgccacaccaactgt                                                                >  2:606267‑M2/1‑63 (MQ=255)
                                                                                      ggTATCGCCGTTGATCTCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCGGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCTCCGCGCGGGCCgg                                                              <  1:751527/149‑1 (MQ=255)
                                                                                               gTTGATCGCCGTCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAAGATCTAACCCCTGGTCCTGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGTGCGCCGGTCAGGccca                                                     >  1:827807/1‑147 (MQ=255)
                                                                                               gTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCATCACCGCGTGCGCCGGTAAGGCCaa                                                     <  2:518966/149‑1 (MQ=255)
                                                                                                ttGCTCGCCATCAGTAGGAGCAAGGTACCGAGCAATGCCAGTTCAGGGTCTAGCCCCTGATCCAGCAGAGTTGGTTAATTCGGCAAGCCGTGATTGATCAGCAGTGGATACCCCGCTTCGGGTTCACCGCGTGCGCCTGTAAGGCCAAg                                                    <  1:38176/149‑1 (MQ=255)
                                                                                                  gATCGCCAACAGTAGGAGCAAGGTATCGAGCAACGCCAGTCCAGGATCTtgatcctacccacgtaatatggacacaggcctaagcgaggttcttgttttcaaattgttccggactgaggccgccacaccaactgtgccgccgccaccga                                                  >  1:401349‑M2/1‑49 (MQ=255)
                                                                                                      ttactcacttggcccggcgtccacgattgctggggaagatcATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGTGCGCCGGTAAGGCCAAGCTGTTg                                              <  1:813259‑M2/108‑1 (MQ=255)
                                                                                                      gCCATGAGTAGTGGGAAGGTATCGGGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGGTTGATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGTGCGCCGGTAAGGCCAAGCTGTTg                                              <  1:28403/149‑1 (MQ=255)
                                                                                                          tCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATATAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGCGCGCCGGCAAGGCCAAGCTGTTGGtcc                                          >  1:99624/1‑147 (MQ=255)
                                                                                                           cAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGTGCGCCGGTAAGGCCAAGCTGTTGGTACa                                         >  1:301788/1‑149 (MQ=255)
                                                                                                             gttcgccgcgtgtccactattcctgggtaagatcATCTAACCCCTGACCCAGCAGAGGGAGGTAATGCGGCAAGGCGGGAGTGATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGTGCGCCGGTAAGGCCAAGCTGTTGGTACAAc                                       <  1:328395‑M2/115‑1 (MQ=255)
                                                                                                              taggcgcacgtgttCGAGCAATCGCTTTTCAGGATCTAACCCCTGTTCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGTTTCACCGCGTGCGCCGGTAAGGCCAAGCTGTTGGTACAAcc                                      <  1:737635/136‑1 (MQ=255)
                                                                                                              tAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTtgatcctacccacgtaatatggacacaggcctaagcgaggttcttgttttcaaattgttccggactgaggccgccacgccaactgtgccgccgccaccgattctactccgct                                      <  2:686086‑M2/149‑113 (MQ=255)
                                                                                                                 gAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTtgatcctacccacgtaatatggacacaggcctaagcgaggttcttgttttcacattgttccggactgaggccgccacaccaactgtgccgccgccaccgcttgtaatcccccccg                                   <  2:346189‑M2/149‑116 (MQ=255)
                                                                                                                  aGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGTGCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTg                                  >  2:708475/1‑149 (MQ=255)
                                                                                                                   gCAAGGTATCGCGCAAGGCCAGTTCCGGGTCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGTGCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGa                                 <  1:249145/149‑1 (MQ=255)
                                                                                                                    cAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCACGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCACGGCGTGCGCCGGTAAGGCCGAGCTGTTGGCACAACCGTTggc                                >  2:222997/1‑147 (MQ=255)
                                                                                                                    cAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGTGCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGAc                                >  1:554128/1‑149 (MQ=255)
                                                                                                                    cAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGTGCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGAc                                >  2:720753/1‑149 (MQ=255)
                                                                                                                    cAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGTGCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGAc                                >  2:36422/1‑149 (MQ=255)
                                                                                                                     aaGGTACCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGTGCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGAcc                               <  2:122539/149‑1 (MQ=255)
                                                                                                                       ggTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGTGCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTg                             >  1:27399/1‑149 (MQ=255)
                                                                                                                           tCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGCGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGTGCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTGCCGt                         >  2:380091/1‑149 (MQ=255)
                                                                                                                           tCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGTGCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTGCCGt                         >  2:384102/1‑149 (MQ=255)
                                                                                                                              aGCAATGCCAGTTCAGGATCTtgatcctacccacgtaatatggacacaggcctaagcgcggttcttgttttcaaattgtttcggtctgaggccgccacaccaactgtgccgccgccaccgattgtaatcacattccacataattcacca                      <  2:420424‑M2/149‑129 (MQ=255)
                                                                                                                              aGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGTGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGTGCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTGCCGCCAg                      >  1:361106/1‑149 (MQ=255)
                                                                                                                              aGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGTGCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTGCCGTCAg                      >  1:700263/1‑149 (MQ=255)
                                                                                                                              aGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCATCACCGCATGCGCCGGTAAGGCCAAGCGATTGGTACAACCGTTGACCTGACTTCAg                      >  2:254404/1‑149 (MQ=255)
                                                                                                                                   tGCCAGTTCAGGATCTtgatcctacccacgtaatatggacacaggcctaagcgaggttcttgttttcaaattgttccggactgaggccgccacaccaactgtgccgccgccaccgattgtaatcacattccatatcattaaacaccgtt                 <  2:738682‑M2/149‑134 (MQ=255)
                                                                                                                                   tGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCATTGGATAACCCGCTTCGGCTTCACCGCGAGCGCCGGTAAGGCCAAGCTGTTGGTACAACCGGTGACCTGCCGTCAGGtggg                 >  2:643247/1‑147 (MQ=255)
                                                                                                                                       aGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGTGCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTGCCGTCAGCTGTGAatt             >  2:59372/1‑149 (MQ=255)
                                                                                                                                         ttCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCCCCAGTGGATAACCCGCTTCGGCTTCACCGCGTGCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTGCCGTCAGTTGTGAattat           <  2:370662/149‑1 (MQ=255)
                                                                                                                                         ttCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGTGCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTGCCGTCAGTTGTGAattat           >  1:279802/1‑149 (MQ=255)
                                                                                                                                         ttCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGAACACCAGTGGATAAACCGCTTCGGCTTCACCGCGTGCGCCGGTAAGGCCCAGCTGTTGGTACAACCCTTGACCTGCCGTCCGTCGTGAattat           >  1:121945/1‑149 (MQ=255)
                                                                                                                                           cAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCCCCAGTGGATAACCCGCTTCGGCTTCACCGCGTGCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTGCCGCCAGTTGTGGAttgttg         >  1:767080/1‑149 (MQ=255)
                                                                                                                                             ggATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTCATCACCCGTGGATAACCCGCTTCGGCTTCACCGCGTGCGCCGGTAAGGCCAAGCTATTGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGt       <  1:575701/149‑1 (MQ=255)
                                                                                                                                              gATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGTGCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTGCCGTCAGTGGTGAATTATTGGTa      >  1:655696/1‑149 (MQ=255)
                                                                                                                                              gATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGTGCGCCGGTAAGGCCAAGCTGTTGGCACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTa      >  1:269511/1‑149 (MQ=255)
                                                                                                                                                  tAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGTGCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCa  >  2:78800/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
GTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAGGTAATGCGGCAAGGCGTGATTGATCACCAGTGGATAACCCGCTTCGGCTTCACCGCGTGCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCA  >  CP009273/642202‑642496

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.