New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3939413	12 (0.070)	28 (0.180)	13/288	17.0	70.6%	noncoding (2350/2904 nt)	rrlC	23S ribosomal RNA of rrnC operon
	?	CP009273	= 3939429	NA (NA)					noncoding (2366/2904 nt)	rrlC	23S ribosomal RNA of rrnC operon
Rejected: Coverage evenness skew score above cutoff.

TGGACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCGAGCGTGA  >  CP009273/3939265‑3939421                                                                                                                                                     |         tGGACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGc          <  1:2240875/149‑1 (MQ=33) gcaacccggattacGGGGTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGGCGGACATCAGGAGGTTAGTGCAATGGCATAAGCACGCTTGACTGc          >  1:1537987/14‑149 (MQ=1)   gACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTCAAGAATCACCGAGGTCCAGGAAGGTGGGCTAAGCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGATTGACTGCGa        >  1:2284290/1‑149 (MQ=11)   gACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGCGGTTAGTGCACTGGCATAAGCCAGCTTGACTGCGa        >  2:1936792/1‑149 (MQ=17)   gACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGCTGGTGCGATGGCATGAGCCAGCTTGACTGCGa        >  2:2214271/1‑149 (MQ=255)   gACCCGTGATCCGGGTTGCGGACAGTGTCTGGGGGGTCGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGGTGGCTAATCCTGGGCGGACACCAGGGGGTTAGTGCACTGGCATAAGCCAGCTTGACGGCGa        >  1:1425692/1‑149 (MQ=11)   atcccGTGATCCGGGTTGGGGGCAGTGTCTGGTGGGTAGTTCGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCGa        <  1:1319681/147‑1 (MQ=12)      ccGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGCCATTAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCGGGCg     >  2:209853/1‑149 (MQ=12)      ccGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAAGGGCATAAGCCAGCTTGACTGCGAGCg     >  1:2227690/1‑149 (MQ=17)       cGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGGAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCGAGCGt    >  2:2552160/1‑149 (MQ=17)       cGTGATCCGGGTTGCGGACAGTGTCTGGTGGGGCATTGGGCTGTTTCGTTCGCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATACGCCAGCTTGACTGCGAGCGt    <  1:557728/149‑1 (MQ=11)        gTGATCCGGGTTGCGGACAGTGTCTGGTGGGGAGTTTGACTGGGACGGTCTCATCCTAAAGAGTAACGAGGGAGCACGAAGGTTGGCTAATCCTGGTCGGAGATCAGGGGGTTAGTGCAATGGCATAAGCAAGCTTGACTGCGAGCGTg   >  1:1584666/1‑149 (MQ=11)        gTGATCCGGGTTGCGGACAGTGTCTGGAGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGAAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTGGGACATCAGGAGGTAAGTGCAATGGCATACACAAGCTTGACTGCGAGCTTg   >  1:1001082/1‑149 (MQ=11)         tGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCGAGCGTGa  <  2:916680/149‑1 (MQ=31)                                                                                                                                                     |         TGGACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCGAGCGTGA  >  CP009273/3939265‑3939421

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.